Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC017098A_C01 KMC017098A_c01
(503 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAA52160.1| cytochrome P-450 S-mephenytoin 4-hydroxylase 34 0.82
gb|AAB35292.1| cytochrome P450 arachidonic acid epoxygenase isof... 34 0.82
gb|AAH20596.1|AAH20596 Unknown (protein for MGC:22146) [Homo sap... 34 0.82
sp|P10632|CPC8_HUMAN Cytochrome P450 2C8 (CYPIIC8) (P450 form 1)... 34 0.82
ref|NP_000761.2| cytochrome P450, subfamily IIC, polypeptide 8 i... 34 0.82
>gb|AAA52160.1| cytochrome P-450 S-mephenytoin 4-hydroxylase
Length = 480
Score = 34.3 bits (77), Expect = 0.82
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +2
Query: 80 NSKNVFNYRLKIHSTNSIFQAGFYTTSTTIQYTLTMAVFHP 202
N K+ FN + + +F AG TTSTT++Y L + + HP
Sbjct: 267 NQKSEFNIENLVGTVADLFVAGTETTSTTLRYGLLLLLKHP 307
>gb|AAB35292.1| cytochrome P450 arachidonic acid epoxygenase isoform, Cyp 2C8
[human, kidney, Peptide Partial, 485 aa]
Length = 485
Score = 34.3 bits (77), Expect = 0.82
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +2
Query: 80 NSKNVFNYRLKIHSTNSIFQAGFYTTSTTIQYTLTMAVFHP 202
N K+ FN + + +F AG TTSTT++Y L + + HP
Sbjct: 272 NQKSEFNIENLVGTVADLFVAGTETTSTTLRYGLLLLLKHP 312
>gb|AAH20596.1|AAH20596 Unknown (protein for MGC:22146) [Homo sapiens]
Length = 490
Score = 34.3 bits (77), Expect = 0.82
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +2
Query: 80 NSKNVFNYRLKIHSTNSIFQAGFYTTSTTIQYTLTMAVFHP 202
N K+ FN + + +F AG TTSTT++Y L + + HP
Sbjct: 277 NQKSEFNIENLVGTVADLFVAGTETTSTTLRYGLLLLLKHP 317
>sp|P10632|CPC8_HUMAN Cytochrome P450 2C8 (CYPIIC8) (P450 form 1) (P450 MP-12/MP-20)
(P450 IIC2) (S-mephenytoin 4-hydroxylase)
gi|297404|emb|CAA68550.1| IIC2 [Homo sapiens]
Length = 490
Score = 34.3 bits (77), Expect = 0.82
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +2
Query: 80 NSKNVFNYRLKIHSTNSIFQAGFYTTSTTIQYTLTMAVFHP 202
N K+ FN + + +F AG TTSTT++Y L + + HP
Sbjct: 277 NQKSEFNIENLVGTVADLFVAGTETTSTTLRYGLLLLLKHP 317
>ref|NP_000761.2| cytochrome P450, subfamily IIC, polypeptide 8 isoform 1;
mephenytoin 4-hydroxylase; microsomal monooxygenase;
xenobiotic monooxygenase; flavoprotein-linked
monooxygenase; P450 form 1 [Homo sapiens]
gi|87266|pir||A29782 unspecific monooxygenase (EC
1.14.14.1) cytochrome P450 2C8 - human
gi|181326|gb|AAA35739.1| cytochrome P-450 1
Length = 490
Score = 34.3 bits (77), Expect = 0.82
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +2
Query: 80 NSKNVFNYRLKIHSTNSIFQAGFYTTSTTIQYTLTMAVFHP 202
N K+ FN + + +F AG TTSTT++Y L + + HP
Sbjct: 277 NQKSEFNIENLVGTVADLFVAGTETTSTTLRYGLLLLLKHP 317
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 408,707,519
Number of Sequences: 1393205
Number of extensions: 8441993
Number of successful extensions: 18140
Number of sequences better than 10.0: 73
Number of HSP's better than 10.0 without gapping: 17329
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18079
length of database: 448,689,247
effective HSP length: 114
effective length of database: 289,863,877
effective search space used: 15362785481
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
