Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC017089A_C01 KMC017089A_c01
(584 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAL24268.1| AT4g00750/F15P23_1 [Arabidopsis thaliana] gi|2330... 205 3e-52
ref|NP_191984.1| hypothetical protein; protein id: At4g00750.1 [... 205 3e-52
ref|NP_182099.1| hypothetical protein; protein id: At2g45750.1 [... 201 4e-51
dbj|BAA83350.1| Similar to Arabidopsis thaliana BAC F15P23 (AF12... 189 3e-47
gb|AAL58254.1|AC084762_28 hypothetical protein [Oryza sativa] 174 1e-42
>gb|AAL24268.1| AT4g00750/F15P23_1 [Arabidopsis thaliana]
gi|23308277|gb|AAN18108.1| At4g00750/F15P23_1
[Arabidopsis thaliana]
Length = 150
Score = 205 bits (522), Expect = 3e-52
Identities = 93/119 (78%), Positives = 106/119 (88%)
Frame = -3
Query: 579 INTLGVIYERGLIGTYQNWCEAMSTYPRTYDFIHGDSVFTLYQNRCNIEDILLEMDRILR 400
+NTLGVIYERGLIGTYQNWCEAMSTYPRTYDFIH DSVF+LY++RC++EDILLEMDRILR
Sbjct: 29 VNTLGVIYERGLIGTYQNWCEAMSTYPRTYDFIHADSVFSLYKDRCDMEDILLEMDRILR 88
Query: 399 PQGSVILRDDVDVLLKVKRFADTMQWDTRIADHEKGPHQREKILVAVKQYWTAPLPDPS 223
P+GSVI+RDD+DVL KVK+ D MQW+ RI DHE GP +REKIL VK+YWTAP PD S
Sbjct: 89 PKGSVIIRDDIDVLTKVKKITDAMQWEGRIGDHENGPLEREKILFLVKEYWTAPAPDQS 147
>ref|NP_191984.1| hypothetical protein; protein id: At4g00750.1 [Arabidopsis
thaliana] gi|25372104|pir||C85010 hypothetical protein
AT4g00750 [imported] - Arabidopsis thaliana
gi|4325339|gb|AAD17339.1| F15P23.1 gene product
[Arabidopsis thaliana] gi|7267414|emb|CAB80884.1|
hypothetical protein [Arabidopsis thaliana]
Length = 633
Score = 205 bits (522), Expect = 3e-52
Identities = 93/119 (78%), Positives = 106/119 (88%)
Frame = -3
Query: 579 INTLGVIYERGLIGTYQNWCEAMSTYPRTYDFIHGDSVFTLYQNRCNIEDILLEMDRILR 400
+NTLGVIYERGLIGTYQNWCEAMSTYPRTYDFIH DSVF+LY++RC++EDILLEMDRILR
Sbjct: 512 VNTLGVIYERGLIGTYQNWCEAMSTYPRTYDFIHADSVFSLYKDRCDMEDILLEMDRILR 571
Query: 399 PQGSVILRDDVDVLLKVKRFADTMQWDTRIADHEKGPHQREKILVAVKQYWTAPLPDPS 223
P+GSVI+RDD+DVL KVK+ D MQW+ RI DHE GP +REKIL VK+YWTAP PD S
Sbjct: 572 PKGSVIIRDDIDVLTKVKKITDAMQWEGRIGDHENGPLEREKILFLVKEYWTAPAPDQS 630
>ref|NP_182099.1| hypothetical protein; protein id: At2g45750.1 [Arabidopsis
thaliana] gi|7486465|pir||T02472 hypothetical protein
At2g45750 [imported] - Arabidopsis thaliana
gi|3386620|gb|AAC28550.1| hypothetical protein
[Arabidopsis thaliana]
Length = 631
Score = 201 bits (512), Expect = 4e-51
Identities = 92/118 (77%), Positives = 102/118 (85%)
Frame = -3
Query: 582 EINTLGVIYERGLIGTYQNWCEAMSTYPRTYDFIHGDSVFTLYQNRCNIEDILLEMDRIL 403
++NTLGVIYERGLIGTYQNWCEAMSTYPRTYDFIH DSVFTLYQ +C E+ILLEMDRIL
Sbjct: 504 KLNTLGVIYERGLIGTYQNWCEAMSTYPRTYDFIHADSVFTLYQGQCEPEEILLEMDRIL 563
Query: 402 RPQGSVILRDDVDVLLKVKRFADTMQWDTRIADHEKGPHQREKILVAVKQYWTAPLPD 229
RP G VI+RDDVDVL+KVK ++W+ RIADHEKGPH+REKI AVKQYWT P PD
Sbjct: 564 RPGGGVIIRDDVDVLIKVKELTKGLEWEGRIADHEKGPHEREKIYYAVKQYWTVPAPD 621
>dbj|BAA83350.1| Similar to Arabidopsis thaliana BAC F15P23 (AF128392) [Oryza sativa
(japonica cultivar-group)] gi|25553569|dbj|BAC24840.1|
OSJNBa0038F22.19 [Oryza sativa (japonica
cultivar-group)]
Length = 618
Score = 189 bits (479), Expect = 3e-47
Identities = 85/112 (75%), Positives = 100/112 (88%)
Frame = -3
Query: 576 NTLGVIYERGLIGTYQNWCEAMSTYPRTYDFIHGDSVFTLYQNRCNIEDILLEMDRILRP 397
NTLGVIYERGLIGTYQ+WCEAMSTYPRTYD IH S+FT+Y++RC +EDILLEMDR+LRP
Sbjct: 507 NTLGVIYERGLIGTYQDWCEAMSTYPRTYDLIHAYSLFTMYKDRCEMEDILLEMDRVLRP 566
Query: 396 QGSVILRDDVDVLLKVKRFADTMQWDTRIADHEKGPHQREKILVAVKQYWTA 241
+G+VI RDDVDVL+K+K AD M+W++RI DHE GP QREKILV+VK YWTA
Sbjct: 567 EGTVIFRDDVDVLVKIKNIADGMRWESRIVDHEDGPMQREKILVSVKSYWTA 618
>gb|AAL58254.1|AC084762_28 hypothetical protein [Oryza sativa]
Length = 611
Score = 174 bits (440), Expect = 1e-42
Identities = 77/112 (68%), Positives = 94/112 (83%)
Frame = -3
Query: 582 EINTLGVIYERGLIGTYQNWCEAMSTYPRTYDFIHGDSVFTLYQNRCNIEDILLEMDRIL 403
+ +TLGVIYERGLIG Y +WCE STYPRTYD IH ++VF+LY+N+C EDILLEMDRIL
Sbjct: 493 DTSTLGVIYERGLIGMYHDWCEGFSTYPRTYDLIHANAVFSLYENKCKFEDILLEMDRIL 552
Query: 402 RPQGSVILRDDVDVLLKVKRFADTMQWDTRIADHEKGPHQREKILVAVKQYW 247
RP+G+VI+RD VDVL+KV++ A+ M+W TR+ DHE GPH EKIL AVKQYW
Sbjct: 553 RPEGAVIIRDKVDVLVKVEKIANAMRWQTRLTDHEGGPHVPEKILFAVKQYW 604
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 559,733,431
Number of Sequences: 1393205
Number of extensions: 12891928
Number of successful extensions: 38189
Number of sequences better than 10.0: 85
Number of HSP's better than 10.0 without gapping: 36811
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38139
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 21997688174
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
