>KMC016947A_C01 KMC016947A_c01
AAATAAGGGCATTTAAGTCAAGTTATATATCAATAAATAATCTCTTAAACTATGTAAATA
ATATTAAGTAACAAACAGTTGGCTACTGAGCTAGTAAGTAAAATTGAATATGCTATCCAA
GATCGGGTCAAGAACAAGCAATGAATTAAAACATTAAATTCAGTAGCTCTGGTACTTGTG
AGTCTGGGATGTTCTGGCCATTGATGTTACAAAATCATTAATGGAAGATATGGGCCCTGC
TGGCTCATTTTCCCATGTGAGTTAATATTCTGCTAATTAGAGCTTCCTTCTTCCCAGAAA
CAGGAAGATTATGAGCTGTGAGATAATATTTCAACTCCACTACAGTCAAATCCTTTAACT
TTCCAGCATCAGCGAGCTCACCCCAGTCATAGTTTTCACACTCTTTGGTTGCTAACTCAG
CATGTGCCTTTCGTTTTTGGGATGCTTCAGTTGGCTTCCCAATTCCATGCTCACTTTCCT
CATCATAATTCTCCCCATATACAGAGATCTT

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KMC016947A_C01 KMC016947A_c01
         (511 letters)

Database: nr 
           1,393,205 sequences; 448,689,247 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

dbj|BAC24888.1| putative ATP-dependent DNA helicase II, 70 KDa s...   112  3e-24
pir||D86305 hypothetical protein F6I1.2 - Arabidopsis thaliana g...    91  1e-17
ref|NP_564012.1| expressed protein; protein id: At1g16970.1, sup...    91  1e-17
ref|NP_345756.1| SAP domain protein [Streptococcus pneumoniae TI...    40  0.016
gb|AAK54496.1|AF368231_3 LCDV orf 58-like protein [Regina ranavi...    37  0.17

>dbj|BAC24888.1| putative ATP-dependent DNA helicase II, 70 KDa subunit [Oryza
           sativa (japonica cultivar-group)]
          Length = 733

 Score =  112 bits (279), Expect = 3e-24
 Identities = 54/88 (61%), Positives = 66/88 (74%)
 Frame = -1

Query: 511 KISVYGENYDEESEHGIGKPTEASQKRKAHAELATKECENYDWGELADAGKLKDLTVVEL 332
           K SVYGENYD+E          AS+KRKA  + A ++   ++W ELAD GKLKD+TVV+L
Sbjct: 646 KASVYGENYDQEEAEAAAAKAGASKKRKALTDAAAEKSAAHNWAELADTGKLKDMTVVDL 705

Query: 331 KYYLTAHNLPVSGKKEALISRILTHMGK 248
           K YL+AH LPVSGKKEAL+SRILTH+GK
Sbjct: 706 KSYLSAHGLPVSGKKEALVSRILTHLGK 733

>pir||D86305 hypothetical protein F6I1.2 - Arabidopsis thaliana
           gi|9802766|gb|AAF99835.1|AC051629_2 Hypothetical protein
           [Arabidopsis thaliana]
          Length = 607

 Score = 90.5 bits (223), Expect = 1e-17
 Identities = 53/88 (60%), Positives = 63/88 (71%)
 Frame = -1

Query: 511 KISVYGENYDEESEHGIGKPTEASQKRKAHAELATKECENYDWGELADAGKLKDLTVVEL 332
           K S+YG++ DEES+ G     E S+KRKA       +   YD+ ELA  GKLKDLTVVEL
Sbjct: 527 KQSIYGDDPDEESDSGA---KEKSKKRKA----GDADDGKYDYIELAKTGKLKDLTVVEL 579

Query: 331 KYYLTAHNLPVSGKKEALISRILTHMGK 248
           K YLTA+NL VSGKKE LI+RILTH+GK
Sbjct: 580 KTYLTANNLLVSGKKEVLINRILTHIGK 607

>ref|NP_564012.1| expressed protein; protein id: At1g16970.1, supported by cDNA:
           gi_12006423 [Arabidopsis thaliana]
           gi|12006424|gb|AAG44852.1|AF283759_1 Ku70-like protein
           [Arabidopsis thaliana]
          Length = 621

 Score = 90.5 bits (223), Expect = 1e-17
 Identities = 53/88 (60%), Positives = 63/88 (71%)
 Frame = -1

Query: 511 KISVYGENYDEESEHGIGKPTEASQKRKAHAELATKECENYDWGELADAGKLKDLTVVEL 332
           K S+YG++ DEES+ G     E S+KRKA       +   YD+ ELA  GKLKDLTVVEL
Sbjct: 541 KQSIYGDDPDEESDSGA---KEKSKKRKA----GDADDGKYDYIELAKTGKLKDLTVVEL 593

Query: 331 KYYLTAHNLPVSGKKEALISRILTHMGK 248
           K YLTA+NL VSGKKE LI+RILTH+GK
Sbjct: 594 KTYLTANNLLVSGKKEVLINRILTHIGK 621

>ref|NP_345756.1| SAP domain protein [Streptococcus pneumoniae TIGR4]
           gi|25389007|pir||C95150 SAP domain protein [imported] -
           Streptococcus pneumoniae  (strain TIGR4)
           gi|14972777|gb|AAK75396.1| SAP domain protein
           [Streptococcus pneumoniae TIGR4]
          Length = 332

 Score = 40.0 bits (92), Expect = 0.016
 Identities = 22/46 (47%), Positives = 27/46 (57%)
 Frame = -1

Query: 391 YDWGELADAGKLKDLTVVELKYYLTAHNLPVSGKKEALISRILTHM 254
           Y  G       L  LTVVELK  L+ HNL  SGKK  LI+RI+ ++
Sbjct: 75  YKLGYFTKNKTLSYLTVVELKTILSKHNLATSGKKAELITRIINNV 120

>gb|AAK54496.1|AF368231_3 LCDV orf 58-like protein [Regina ranavirus]
          Length = 193

 Score = 36.6 bits (83), Expect = 0.17
 Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
 Frame = -1

Query: 493 ENYDEESEHGIGKPTEA--SQKRKAHAELATKECENYDWG---ELADAGKLKDLTVVELK 329
           EN  ++S+     P  A   ++R +  ++ + + EN D     E+ D   L  LT+  LK
Sbjct: 14  ENIPDKSDSEAEAPAPAIVKKRRTSLKKVESSDSENVDEATGDEVIDEDALSKLTIQTLK 73

Query: 328 YYLTAHNLPVSGKKEALISRIL 263
                 NL +SG K AL+ R++
Sbjct: 74  GMCKTRNLKISGNKAALVQRLI 95

  Database: nr
    Posted date:  Apr 1, 2003  2:05 AM
  Number of letters in database: 448,689,247
  Number of sequences in database:  1,393,205
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 398,842,514
Number of Sequences: 1393205
Number of extensions: 7744260
Number of successful extensions: 32887
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 32416
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32863
length of database: 448,689,247
effective HSP length: 114
effective length of database: 289,863,877
effective search space used: 15942513235
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

EST assemble image

clone accession position 1 MFB063h09_f BP038602 1 448 2 MFB068h09_f BP038973 1 450 3 SPDL035c09_f BP054189 28 511

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