Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC016881A_C01 KMC016881A_c01
(884 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAA89815.1| beta-amyrin synthase [Glycyrrhiza glabra] 355 5e-97
emb|CAD23247.1| beta-amyrin synthase [Medicago truncatula] 352 3e-96
dbj|BAA97558.1| beta-amyrin synthase [Pisum sativum] 351 1e-95
gb|AAO33579.1|AF478454_1 putative beta-amyrin synthase [Lotus ja... 350 2e-95
gb|AAO33578.1|AF478453_1 beta-amyrin synthase [Medicago truncatula] 350 2e-95
>dbj|BAA89815.1| beta-amyrin synthase [Glycyrrhiza glabra]
Length = 765
Score = 355 bits (911), Expect = 5e-97
Identities = 165/216 (76%), Positives = 188/216 (86%)
Frame = -3
Query: 882 EILNPSESFEDIVVEHEYVENTGSAIEALVLFKKLYPEHRLNEIESSIDNAVRFIEDTPT 703
E+LNP+E F DIVVEHEYVE TGSAI+ALVLFKKLYP HR EIE+ I NAVRF+EDT T
Sbjct: 544 ELLNPTEFFADIVVEHEYVECTGSAIQALVLFKKLYPGHRKKEIENFIANAVRFLEDTQT 603
Query: 702 SSGSWYGNWGVCFIYGTYFALGGLAAVGKTFSNCSAIPKAVNFLLTTQRENGGWGESYQS 523
+ GSWYGNWGVCF YG++FALGGLAA GKTF+NC+AI KAV FLLTTQRE+GGWGESY S
Sbjct: 604 ADGSWYGNWGVCFTYGSWFALGGLAAAGKTFANCAAIRKAVKFLLTTQREDGGWGESYLS 663
Query: 522 CPRKRYIPLEGIQSNVVQTAWALMALIHSGQEERDPTPLHHAAKFLINSQLEDGDWPQQE 343
P+K Y+PLEG +SNVV TAWALM LIH+GQ ERDP PLH AAK +INSQLE+GDWPQQE
Sbjct: 664 SPKKIYVPLEGSRSNVVHTAWALMGLIHAGQAERDPAPLHRAAKLIINSQLEEGDWPQQE 723
Query: 342 STGVFCRNCIMHYPMYRNIFPMWALAEYRKRAGLPS 235
TGVF +NC++HYPMYR+I+PMWALAEYR+R LPS
Sbjct: 724 ITGVFMKNCMLHYPMYRDIYPMWALAEYRRRVPLPS 759
>emb|CAD23247.1| beta-amyrin synthase [Medicago truncatula]
Length = 762
Score = 352 bits (904), Expect = 3e-96
Identities = 164/216 (75%), Positives = 187/216 (85%)
Frame = -3
Query: 882 EILNPSESFEDIVVEHEYVENTGSAIEALVLFKKLYPEHRLNEIESSIDNAVRFIEDTPT 703
E+LNP+E F DIVVEHEYVE TGSAI+ALVLFKKLYP HR EIE+ I AVRFIED T
Sbjct: 544 ELLNPTEFFADIVVEHEYVECTGSAIQALVLFKKLYPGHRKKEIENFISEAVRFIEDIQT 603
Query: 702 SSGSWYGNWGVCFIYGTYFALGGLAAVGKTFSNCSAIPKAVNFLLTTQRENGGWGESYQS 523
+ GSWYGNWGVCF YG++FALGGLAA GKT++NC+AI KAV FLLTTQRE+GGWGESY S
Sbjct: 604 ADGSWYGNWGVCFTYGSWFALGGLAAAGKTYTNCAAIRKAVKFLLTTQREDGGWGESYLS 663
Query: 522 CPRKRYIPLEGIQSNVVQTAWALMALIHSGQEERDPTPLHHAAKFLINSQLEDGDWPQQE 343
P+K Y+PLEG +SNVV TAWALM LIH+GQ ERDPTPLH AAK LINSQLE+GDWPQQE
Sbjct: 664 SPKKIYVPLEGSRSNVVHTAWALMGLIHAGQAERDPTPLHRAAKLLINSQLEEGDWPQQE 723
Query: 342 STGVFCRNCIMHYPMYRNIFPMWALAEYRKRAGLPS 235
TGVF +NC++HYPMYR+I+P+WALAEYR+R LPS
Sbjct: 724 ITGVFMKNCMLHYPMYRDIYPLWALAEYRRRVPLPS 759
>dbj|BAA97558.1| beta-amyrin synthase [Pisum sativum]
Length = 758
Score = 351 bits (900), Expect = 1e-95
Identities = 163/215 (75%), Positives = 185/215 (85%)
Frame = -3
Query: 882 EILNPSESFEDIVVEHEYVENTGSAIEALVLFKKLYPEHRLNEIESSIDNAVRFIEDTPT 703
E+LNP+E F DIVVEHEYVE TGSAI+ALVLFKKLYP HR EIE+ I NAVRF+EDT T
Sbjct: 544 ELLNPTEFFADIVVEHEYVECTGSAIQALVLFKKLYPGHRKKEIENFIFNAVRFLEDTQT 603
Query: 702 SSGSWYGNWGVCFIYGTYFALGGLAAVGKTFSNCSAIPKAVNFLLTTQRENGGWGESYQS 523
GSWYGNWGVCF YG++FALGGLAA GKT++NC+AI K V FLLTTQRE+GGWGESY S
Sbjct: 604 EDGSWYGNWGVCFTYGSWFALGGLAAAGKTYTNCAAIRKGVKFLLTTQREDGGWGESYLS 663
Query: 522 CPRKRYIPLEGIQSNVVQTAWALMALIHSGQEERDPTPLHHAAKFLINSQLEDGDWPQQE 343
P+K Y+PLEG +SNVV TAWALM LIH+GQ ERDPTPLH AAK LINSQLE GDWPQQE
Sbjct: 664 SPKKIYVPLEGNRSNVVHTAWALMGLIHAGQSERDPTPLHRAAKLLINSQLEQGDWPQQE 723
Query: 342 STGVFCRNCIMHYPMYRNIFPMWALAEYRKRAGLP 238
TGVF +NC++HYPMYR+I+P+WALAEYR+R LP
Sbjct: 724 ITGVFMKNCMLHYPMYRDIYPLWALAEYRRRVPLP 758
>gb|AAO33579.1|AF478454_1 putative beta-amyrin synthase [Lotus japonicus]
Length = 750
Score = 350 bits (898), Expect = 2e-95
Identities = 164/216 (75%), Positives = 185/216 (84%)
Frame = -3
Query: 882 EILNPSESFEDIVVEHEYVENTGSAIEALVLFKKLYPEHRLNEIESSIDNAVRFIEDTPT 703
E+LNP+E F DIVVEHEYVE TGSAI ALVLFKKLYP HR EIE+ I AVRF+EDT T
Sbjct: 532 ELLNPTEFFADIVVEHEYVECTGSAIGALVLFKKLYPGHRKKEIENFISEAVRFLEDTQT 591
Query: 702 SSGSWYGNWGVCFIYGTYFALGGLAAVGKTFSNCSAIPKAVNFLLTTQRENGGWGESYQS 523
+ GSWYGNWGVCF YG++FALGGLAA GKT++NC+AI KAV FLLTTQR +GGWGESY S
Sbjct: 592 ADGSWYGNWGVCFTYGSWFALGGLAAAGKTYANCAAIRKAVKFLLTTQRGDGGWGESYLS 651
Query: 522 CPRKRYIPLEGIQSNVVQTAWALMALIHSGQEERDPTPLHHAAKFLINSQLEDGDWPQQE 343
P+K Y+P EG +SNVV TAWALM LIHSGQ ERDPTPLH AAK LINSQLE+GDWPQQE
Sbjct: 652 SPKKIYVPFEGNRSNVVHTAWALMGLIHSGQAERDPTPLHRAAKLLINSQLEEGDWPQQE 711
Query: 342 STGVFCRNCIMHYPMYRNIFPMWALAEYRKRAGLPS 235
TGVF +NC++HYPMYR+I+PMWALAEYR+R LPS
Sbjct: 712 ITGVFMKNCMLHYPMYRDIYPMWALAEYRRRVPLPS 747
>gb|AAO33578.1|AF478453_1 beta-amyrin synthase [Medicago truncatula]
Length = 762
Score = 350 bits (897), Expect = 2e-95
Identities = 163/216 (75%), Positives = 186/216 (85%)
Frame = -3
Query: 882 EILNPSESFEDIVVEHEYVENTGSAIEALVLFKKLYPEHRLNEIESSIDNAVRFIEDTPT 703
E+LNP+E F DIVVEHEYVE TGSAI+ALVLFKKLYP HR EIE+ I AVRFIED T
Sbjct: 544 ELLNPTEFFADIVVEHEYVECTGSAIQALVLFKKLYPGHRKKEIENFISEAVRFIEDIQT 603
Query: 702 SSGSWYGNWGVCFIYGTYFALGGLAAVGKTFSNCSAIPKAVNFLLTTQRENGGWGESYQS 523
+ GSWYGNWGVCF YG++ ALGGLAA GKT++NC+AI KAV FLLTTQRE+GGWGESY S
Sbjct: 604 ADGSWYGNWGVCFTYGSWVALGGLAAAGKTYTNCAAIRKAVKFLLTTQREDGGWGESYLS 663
Query: 522 CPRKRYIPLEGIQSNVVQTAWALMALIHSGQEERDPTPLHHAAKFLINSQLEDGDWPQQE 343
P+K Y+PLEG +SNVV TAWALM LIH+GQ ERDPTPLH AAK LINSQLE+GDWPQQE
Sbjct: 664 SPKKIYVPLEGSRSNVVHTAWALMGLIHAGQAERDPTPLHRAAKLLINSQLEEGDWPQQE 723
Query: 342 STGVFCRNCIMHYPMYRNIFPMWALAEYRKRAGLPS 235
TGVF +NC++HYPMYR+I+P+WALAEYR+R LPS
Sbjct: 724 ITGVFMKNCMLHYPMYRDIYPLWALAEYRRRVPLPS 759
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 760,515,745
Number of Sequences: 1393205
Number of extensions: 17302785
Number of successful extensions: 62006
Number of sequences better than 10.0: 151
Number of HSP's better than 10.0 without gapping: 59370
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 61635
length of database: 448,689,247
effective HSP length: 122
effective length of database: 278,718,237
effective search space used: 47939536764
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
