Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC016775A_C01 KMC016775A_c01
(539 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EAA17316.1| hypothetical protein [Plasmodium yoelii yoelii] 33 1.7
gb|AAD26126.1|AF108834_1 von Willebrand factor [Physeter catodon] 32 3.8
dbj|BAB92063.1| von Willebrand Factor [Miniopterus fuscus] 32 3.8
gb|AAL50675.1|AF447544_1 von Willebrand factor [Noctilio albiven... 32 4.9
dbj|BAB92062.1| von Willebrand Factor [Tadarida insignis] 32 4.9
>gb|EAA17316.1| hypothetical protein [Plasmodium yoelii yoelii]
Length = 1783
Score = 33.5 bits (75), Expect = 1.7
Identities = 35/112 (31%), Positives = 53/112 (47%), Gaps = 6/112 (5%)
Frame = -2
Query: 322 DQVYRIITEFN-YL-IYTS-ALSLQIELCQNATLIKCETNVPR*LRRFNQYRSLIHQQM- 155
+++ +II + N YL I+ S +LSL LC N C +P + + +
Sbjct: 1674 NKINKIIQQTNKYLEIFNSQSLSLFNTLCNN----NCFNCLPLKNKNIESFHISFLDSLP 1729
Query: 154 --HKHHVQIVILLCILCLMLFSIIKFELQFLI*ILIFFTQMCIFGIFLSPNH 5
HK + IL IL +LF I+ F L F++ ++FF IF IF P H
Sbjct: 1730 NNHKSRILFFILFFILFFILFFILFFILFFILFFILFFILFFIF-IFNVPYH 1780
>gb|AAD26126.1|AF108834_1 von Willebrand factor [Physeter catodon]
Length = 411
Score = 32.3 bits (72), Expect = 3.8
Identities = 16/46 (34%), Positives = 27/46 (57%)
Frame = -1
Query: 389 GLELHPHRGKVGNTARWPTDSRGPSLQNNYRIQLLDIYFSLESTNR 252
GLE+ P G VG T + D+ P L + + +LLD+ F L+ +++
Sbjct: 5 GLEVPPTEGPVGLTTPYVEDTPEPPLHDFFCSKLLDLVFLLDGSSK 50
>dbj|BAB92063.1| von Willebrand Factor [Miniopterus fuscus]
Length = 410
Score = 32.3 bits (72), Expect = 3.8
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = -1
Query: 392 HGLELHPHRGKVGNTARWPTDSRGPSLQNNYRIQLLDIYFSLESTNR 252
+GLE+ P G V T + D+ P L + Y +LLD+ F L+ +++
Sbjct: 3 NGLEVPPTEGPVSPTTPFVEDTPEPPLHDYYCSKLLDLVFLLDGSSK 49
>gb|AAL50675.1|AF447544_1 von Willebrand factor [Noctilio albiventris]
Length = 403
Score = 32.0 bits (71), Expect = 4.9
Identities = 16/46 (34%), Positives = 26/46 (55%)
Frame = -1
Query: 389 GLELHPHRGKVGNTARWPTDSRGPSLQNNYRIQLLDIYFSLESTNR 252
GLE+ P G V T + D+ P L + Y +LLD+ F L+ +++
Sbjct: 4 GLEVPPTEGPVSPTTPYVEDTPEPPLHDFYCSKLLDLVFLLDGSSK 49
>dbj|BAB92062.1| von Willebrand Factor [Tadarida insignis]
Length = 410
Score = 32.0 bits (71), Expect = 4.9
Identities = 16/46 (34%), Positives = 26/46 (55%)
Frame = -1
Query: 389 GLELHPHRGKVGNTARWPTDSRGPSLQNNYRIQLLDIYFSLESTNR 252
GLE+ P G V T + D+ P L + Y +LLD+ F L+ +++
Sbjct: 4 GLEVPPTEGPVSPTTPYVEDTPEPPLHDFYCSKLLDLVFLLDGSSK 49
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 416,866,995
Number of Sequences: 1393205
Number of extensions: 8034267
Number of successful extensions: 17723
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 17171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17720
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 18462123008
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
