KMC016735A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KMC016735A_C01 KMC016735A_c01
caaaaaaaagacaacgctcaagatcaaccgagttaattactactaccaagtgatgccctt
gggtctcaaaaacatatgaaCCACATATCAGAGGCTAATGGACAAGATCTTCCATAAGCA
AATATAGAAAAATGTTGAAGTATATGTGGAAGATATGATAGTAAAGTCCTCCCAAGAATA
GTTTCATAGAGGAGATCTCAGCCGAGACTTGAGTGATATCAACTGAATCTGGTCCAATGG
TCATCTCTGAGTGTACCTAGCCACTGTTTATTAGATTGCTTTACAGTATTAATTTAGTTT
GTGTTGTTACAGCTGTGTATGACATGTACCTCACATATTGTACAAATCAAGCTTTCTCCA
AGAAAAATGTGTAACTAATAACTTTTACTTGACAGTACTTATTGCAAAATGTAAATGTTC
TAAGCCATAAGAATATGTTATGGCTGCTATTTTAGGAGACGCATTTTAACTTGCTAAAGT
GGTAGCTTCACAACCATCATGCACACATGCCAAAACATCTTTGTAAGACCTTGAAATGGT
GAAAGAATCGTAGACATTTCCATCACTGCTTTTCTTGTACTCAAAGAGGAGAGATGAATG
ATTGAATGCAGTCAACTTGACAAACCCAAAGTCGTAATCTCTGACAAGGCTCCACTCTGG
GGTTTTTTCGCTGAATCTTGACAAATGGCTCCCTGCCCCTCCAGCAACAACATGAATTGT
TCCATTTACAATGCCAGAATAGTGAGACTTCTCTGTATTTACACATTTGTTCTGATAAAC
GGGGCATGTCCGTTCGTAGTTATGGACA


Nr search

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KMC016735A_C01 KMC016735A_c01
         (808 letters)

Database: nr 
           1,393,205 sequences; 448,689,247 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

emb|CAB71132.1| hypothetical protein [Cicer arietinum]                192  4e-48
ref|NP_199851.1| putative protein; protein id: At5g50400.1 [Arab...   188  9e-47
ref|NP_194219.1| putative protein; protein id: At4g24890.1 [Arab...   186  3e-46
gb|AAN13063.1| unknown protein [Arabidopsis thaliana]                 186  3e-46
emb|CAD12839.2| putative metallophosphatase [Lupinus luteus]          186  5e-46

>emb|CAB71132.1| hypothetical protein [Cicer arietinum]
          Length = 216

 Score =  192 bits (489), Expect = 4e-48
 Identities = 88/113 (77%), Positives = 96/113 (84%)
 Frame = -2

Query: 807 VHNYERTCPVYQNKCVNTEKSHYSGIVNGTIHVVAGGAGSHLSRFSEKTPEWSLVRDYDF 628
           VHNYER CP+YQN+CVN EK+HYSG VNGTIH+V GG GSHLS F+   P WSL +D D+
Sbjct: 104 VHNYERVCPIYQNQCVNKEKTHYSGTVNGTIHIVVGGGGSHLSDFTTAPPVWSLYKDRDY 163

Query: 627 GFVKLTAFNHSSLLFEYKKSSDGNVYDSFTISRSYKDVLACVHDGCEATTLAS 469
           GF KLTAFNHS LLFEYKKSSDG VYDSFTISR Y+DVLACVHDGCE TTLAS
Sbjct: 164 GFGKLTAFNHSYLLFEYKKSSDGKVYDSFTISRDYRDVLACVHDGCEKTTLAS 216

>ref|NP_199851.1| putative protein; protein id: At5g50400.1 [Arabidopsis thaliana]
           gi|9758922|dbj|BAB09459.1| contains similarity to
           unknown protein~gene_id:MXI22.12~pir||T05510
           [Arabidopsis thaliana]
          Length = 529

 Score =  188 bits (477), Expect = 9e-47
 Identities = 86/113 (76%), Positives = 97/113 (85%)
 Frame = -2

Query: 807 VHNYERTCPVYQNKCVNTEKSHYSGIVNGTIHVVAGGAGSHLSRFSEKTPEWSLVRDYDF 628
           VHNYERTCP+YQN+C++ EKSHYSG   GTIHVV GGAGSHLS FS   P+WS+ RDYD+
Sbjct: 417 VHNYERTCPIYQNQCMDNEKSHYSGAFKGTIHVVVGGAGSHLSSFSSLKPKWSIFRDYDY 476

Query: 627 GFVKLTAFNHSSLLFEYKKSSDGNVYDSFTISRSYKDVLACVHDGCEATTLAS 469
           GFVKLTAF+HSSLLFEYKKSS+G V+DSFTI R Y+DVLACV D CE TTLAS
Sbjct: 477 GFVKLTAFDHSSLLFEYKKSSNGAVHDSFTIFREYRDVLACVRDSCEPTTLAS 529

>ref|NP_194219.1| putative protein; protein id: At4g24890.1 [Arabidopsis thaliana]
           gi|7485455|pir||T05510 hypothetical protein F13M23.30 -
           Arabidopsis thaliana gi|4455232|emb|CAB36731.1| putative
           protein [Arabidopsis thaliana]
           gi|7269339|emb|CAB79398.1| putative protein [Arabidopsis
           thaliana]
          Length = 545

 Score =  186 bits (472), Expect = 3e-46
 Identities = 85/112 (75%), Positives = 93/112 (82%)
 Frame = -2

Query: 807 VHNYERTCPVYQNKCVNTEKSHYSGIVNGTIHVVAGGAGSHLSRFSEKTPEWSLVRDYDF 628
           VHNYERTCP+Y+++CVN +K HYSG   GTIHVV GGAGSHLS FS   P+WSLVRDYDF
Sbjct: 433 VHNYERTCPIYESQCVNNDKDHYSGTFKGTIHVVVGGAGSHLSPFSSLVPKWSLVRDYDF 492

Query: 627 GFVKLTAFNHSSLLFEYKKSSDGNVYDSFTISRSYKDVLACVHDGCEATTLA 472
           GFVKLTA +HSSLLFEYKKSS G VYDSF ISR Y+DVLAC HD CE TT A
Sbjct: 493 GFVKLTASDHSSLLFEYKKSSTGQVYDSFNISRDYRDVLACTHDSCEPTTSA 544

>gb|AAN13063.1| unknown protein [Arabidopsis thaliana]
          Length = 615

 Score =  186 bits (472), Expect = 3e-46
 Identities = 85/112 (75%), Positives = 93/112 (82%)
 Frame = -2

Query: 807 VHNYERTCPVYQNKCVNTEKSHYSGIVNGTIHVVAGGAGSHLSRFSEKTPEWSLVRDYDF 628
           VHNYERTCP+Y+++CVN +K HYSG   GTIHVV GGAGSHLS FS   P+WSLVRDYDF
Sbjct: 503 VHNYERTCPIYESQCVNNDKDHYSGTFKGTIHVVVGGAGSHLSPFSSLVPKWSLVRDYDF 562

Query: 627 GFVKLTAFNHSSLLFEYKKSSDGNVYDSFTISRSYKDVLACVHDGCEATTLA 472
           GFVKLTA +HSSLLFEYKKSS G VYDSF ISR Y+DVLAC HD CE TT A
Sbjct: 563 GFVKLTASDHSSLLFEYKKSSTGQVYDSFNISRDYRDVLACTHDSCEPTTSA 614

>emb|CAD12839.2| putative metallophosphatase [Lupinus luteus]
          Length = 597

 Score =  186 bits (471), Expect = 5e-46
 Identities = 85/113 (75%), Positives = 96/113 (84%)
 Frame = -2

Query: 807 VHNYERTCPVYQNKCVNTEKSHYSGIVNGTIHVVAGGAGSHLSRFSEKTPEWSLVRDYDF 628
           VHNYER CP+YQN+CVN+EK+HYSG VNGTIHVV GG GSHLS ++   P WS+ RD DF
Sbjct: 485 VHNYERICPIYQNQCVNSEKTHYSGTVNGTIHVVVGGGGSHLSDYTPSPPVWSVFRDRDF 544

Query: 627 GFVKLTAFNHSSLLFEYKKSSDGNVYDSFTISRSYKDVLACVHDGCEATTLAS 469
           GF KLTAFNHS LLFEYK+SSDGNVYD FTISR Y+DVLA VHDGC+ TTLA+
Sbjct: 545 GFGKLTAFNHSYLLFEYKRSSDGNVYDFFTISRDYRDVLARVHDGCDKTTLAT 597

  Database: nr
    Posted date:  Apr 1, 2003  2:05 AM
  Number of letters in database: 448,689,247
  Number of sequences in database:  1,393,205
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 666,744,789
Number of Sequences: 1393205
Number of extensions: 14056430
Number of successful extensions: 50214
Number of sequences better than 10.0: 467
Number of HSP's better than 10.0 without gapping: 49063
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50177
length of database: 448,689,247
effective HSP length: 121
effective length of database: 280,111,442
effective search space used: 41176381974
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)


EST assemble image


clone accession position
1 SPDL020d12_f BP053246 1 492
2 MFBL044f10_f BP043511 356 808




Lotus japonicus
Kazusa DNA Research Institute