Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC016574A_C01 KMC016574A_c01
(497 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_701946.1| hypothetical protein [Plasmodium falciparum 3D7... 36 0.27
gb|AAK93193.1| LD29569p [Drosophila melanogaster] 35 0.61
ref|NP_647721.2| CG32306-PB [Drosophila melanogaster] gi|2309519... 35 0.61
ref|NP_728744.1| CG32306-PA [Drosophila melanogaster] gi|2309519... 33 1.4
gb|EAA10202.1| agCP15356 [Anopheles gambiae str. PEST] 33 2.3
>ref|NP_701946.1| hypothetical protein [Plasmodium falciparum 3D7]
gi|23497121|gb|AAN36670.1|AE014816_55 hypothetical
protein [Plasmodium falciparum 3D7]
Length = 1361
Score = 35.8 bits (81), Expect = 0.27
Identities = 23/98 (23%), Positives = 43/98 (43%)
Frame = -3
Query: 495 GSNPYSKEVNSNKVVPTSSEQNLSRPIESSQVASYSLENGAIEDQTTCNNKLVDADFEPC 316
GSN S +SN ++ S NLS +++ V+S S N + + + N
Sbjct: 603 GSNNLSSNSDSNNLLSNSDSNNLSSNSDNNNVSSNSDSNNLLSNSDSNN----------- 651
Query: 315 VLSDDKDKSTCQTKENTIVTKDVPNKLSRHKKYLYCCF 202
+LS+ + + +N V+ + K+ K +Y C+
Sbjct: 652 LLSNSDNNNVSSNSDNNNVSSNSETKIKLSHKDMYNCY 689
>gb|AAK93193.1| LD29569p [Drosophila melanogaster]
Length = 763
Score = 34.7 bits (78), Expect = 0.61
Identities = 17/57 (29%), Positives = 31/57 (53%)
Frame = -3
Query: 477 KEVNSNKVVPTSSEQNLSRPIESSQVASYSLENGAIEDQTTCNNKLVDADFEPCVLS 307
+E + N+ ++ S P S++V+S + +N D+ + N +DA+FEP LS
Sbjct: 298 QEQSRNQRATGTTNSRQSPPASSAEVSSSAADNSMHSDERSTPNATIDAEFEPSSLS 354
>ref|NP_647721.2| CG32306-PB [Drosophila melanogaster] gi|23095197|gb|AAF47644.2|
CG32306-PB [Drosophila melanogaster]
Length = 2197
Score = 34.7 bits (78), Expect = 0.61
Identities = 17/57 (29%), Positives = 31/57 (53%)
Frame = -3
Query: 477 KEVNSNKVVPTSSEQNLSRPIESSQVASYSLENGAIEDQTTCNNKLVDADFEPCVLS 307
+E + N+ ++ S P S++V+S + +N D+ + N +DA+FEP LS
Sbjct: 1732 QEQSRNQRATGTTNSRQSPPASSAEVSSSAADNSMHSDERSTPNATIDAEFEPSSLS 1788
>ref|NP_728744.1| CG32306-PA [Drosophila melanogaster] gi|23095198|gb|AAF47647.2|
CG32306-PA [Drosophila melanogaster]
Length = 475
Score = 33.5 bits (75), Expect = 1.4
Identities = 18/47 (38%), Positives = 28/47 (59%)
Frame = -3
Query: 447 TSSEQNLSRPIESSQVASYSLENGAIEDQTTCNNKLVDADFEPCVLS 307
T+S Q S P S++V+S + +N D+ + N +DA+FEP LS
Sbjct: 22 TNSRQ--SPPASSAEVSSSAADNSMHSDERSTPNATIDAEFEPSSLS 66
>gb|EAA10202.1| agCP15356 [Anopheles gambiae str. PEST]
Length = 669
Score = 32.7 bits (73), Expect = 2.3
Identities = 22/96 (22%), Positives = 49/96 (50%), Gaps = 4/96 (4%)
Frame = -3
Query: 492 SNPYSKEVNSNKVVPTSSEQNLSRPIESSQVASYSLENGAIED--QTTCNNKLVDADFEP 319
++P S + + + +Q + P++ +Q ++ NG+ + Q+T N++ D D +
Sbjct: 546 ADPDSLKPKEEEEKKEAGKQPAAAPVDDAQPSTSKGLNGSSSNGKQSTTVNEVEDDDDDM 605
Query: 318 CVLSDDKDK--STCQTKENTIVTKDVPNKLSRHKKY 217
C++ DD+D+ ST + + + T P K +K+
Sbjct: 606 CIIEDDEDEKPSTSKAAADAVTT---PGKSVEKRKH 638
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 392,319,866
Number of Sequences: 1393205
Number of extensions: 7729434
Number of successful extensions: 22918
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 22348
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22905
length of database: 448,689,247
effective HSP length: 114
effective length of database: 289,863,877
effective search space used: 14783057727
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
