Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC016560A_C01 KMC016560A_c01
(506 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_187215.1| protein phosphatase 2C (PP2C), putative; protei... 219 1e-56
ref|NP_568503.1| protein phosphatase 2C (PP2C); protein id: At5g... 213 8e-55
dbj|BAC43045.1| putative protein phosphatase 2C [Arabidopsis tha... 213 8e-55
gb|AAM64353.1| protein phosphatase-like [Arabidopsis thaliana] 212 2e-54
dbj|BAB84697.1| protein phosphatase 2C [Arabidopsis thaliana] 211 3e-54
>ref|NP_187215.1| protein phosphatase 2C (PP2C), putative; protein id: At3g05640.1,
supported by cDNA: gi_15215718, supported by cDNA:
gi_20147410 [Arabidopsis thaliana]
gi|6714446|gb|AAF26133.1|AC011620_9 putative protein
phosphatase-2C [Arabidopsis thaliana]
gi|15215719|gb|AAK91405.1| AT3g05640/F18C1_9
[Arabidopsis thaliana] gi|20147411|gb|AAM10415.1|
AT3g05640/F18C1_9 [Arabidopsis thaliana]
Length = 358
Score = 219 bits (558), Expect = 1e-56
Identities = 102/131 (77%), Positives = 120/131 (90%)
Frame = -2
Query: 505 ERILEHQGRVFCLDDEPGVHRVWLPDEESPGLAMSRAFGDYCVKEYGLISVPEVTQRNIT 326
ERI+ GRVFCL DEPGVHRVW P +ESPGLAMSRAFGDYC+K+YGL+SVPEVTQR+I+
Sbjct: 224 ERIIGCNGRVFCLQDEPGVHRVWQPVDESPGLAMSRAFGDYCIKDYGLVSVPEVTQRHIS 283
Query: 325 SKDQFVVLATDGVWDVISNEEAVDIVSSTADRTDSAKRLVKCAMRAWKRKRRGIAMDDIS 146
+DQF++LATDGVWDVISN+EA+DIVSSTA+R +AKRLV+ A+RAW RKRRGIAMDDIS
Sbjct: 284 IRDQFIILATDGVWDVISNQEAIDIVSSTAERAKAAKRLVQQAVRAWNRKRRGIAMDDIS 343
Query: 145 AICLFFHSSTS 113
A+CLFFHSS+S
Sbjct: 344 AVCLFFHSSSS 354
>ref|NP_568503.1| protein phosphatase 2C (PP2C); protein id: At5g27930.1, supported
by cDNA: 23348. [Arabidopsis thaliana]
Length = 373
Score = 213 bits (543), Expect = 8e-55
Identities = 96/131 (73%), Positives = 120/131 (91%)
Frame = -2
Query: 505 ERILEHQGRVFCLDDEPGVHRVWLPDEESPGLAMSRAFGDYCVKEYGLISVPEVTQRNIT 326
ERI+ +GRVFCLDDEPGVHRVW PD E+PGLAMSRAFGDYC+KEYGL+SVPEVTQR+I+
Sbjct: 229 ERIIGCKGRVFCLDDEPGVHRVWQPDAETPGLAMSRAFGDYCIKEYGLVSVPEVTQRHIS 288
Query: 325 SKDQFVVLATDGVWDVISNEEAVDIVSSTADRTDSAKRLVKCAMRAWKRKRRGIAMDDIS 146
+KD F++LA+DG+WDVISN+EA++IVSSTA+R +AKRLV+ A+RAWK+KRRG +MDD+S
Sbjct: 289 TKDHFIILASDGIWDVISNQEAIEIVSSTAERPKAAKRLVEQAVRAWKKKRRGYSMDDMS 348
Query: 145 AICLFFHSSTS 113
+CLF HSS+S
Sbjct: 349 VVCLFLHSSSS 359
>dbj|BAC43045.1| putative protein phosphatase 2C [Arabidopsis thaliana]
Length = 373
Score = 213 bits (543), Expect = 8e-55
Identities = 96/131 (73%), Positives = 120/131 (91%)
Frame = -2
Query: 505 ERILEHQGRVFCLDDEPGVHRVWLPDEESPGLAMSRAFGDYCVKEYGLISVPEVTQRNIT 326
ERI+ +GRVFCLDDEPGVHRVW PD E+PGLAMSRAFGDYC+KEYGL+SVPEVTQR+I+
Sbjct: 229 ERIIGCKGRVFCLDDEPGVHRVWQPDAETPGLAMSRAFGDYCIKEYGLVSVPEVTQRHIS 288
Query: 325 SKDQFVVLATDGVWDVISNEEAVDIVSSTADRTDSAKRLVKCAMRAWKRKRRGIAMDDIS 146
+KD F++LA+DG+WDVISN+EA++IVSSTA+R +AKRLV+ A+RAWK+KRRG +MDD+S
Sbjct: 289 TKDHFIILASDGIWDVISNQEAIEIVSSTAERPKAAKRLVEQAVRAWKKKRRGYSMDDMS 348
Query: 145 AICLFFHSSTS 113
+CLF HSS+S
Sbjct: 349 VVCLFLHSSSS 359
>gb|AAM64353.1| protein phosphatase-like [Arabidopsis thaliana]
Length = 373
Score = 212 bits (540), Expect = 2e-54
Identities = 95/131 (72%), Positives = 120/131 (91%)
Frame = -2
Query: 505 ERILEHQGRVFCLDDEPGVHRVWLPDEESPGLAMSRAFGDYCVKEYGLISVPEVTQRNIT 326
ERI+ +GRVFCLDDEPGVHRVW PD E+PGLAMSRAFGDYC+KEYGL+SVPEVTQR+I+
Sbjct: 229 ERIIGCKGRVFCLDDEPGVHRVWQPDAETPGLAMSRAFGDYCIKEYGLVSVPEVTQRHIS 288
Query: 325 SKDQFVVLATDGVWDVISNEEAVDIVSSTADRTDSAKRLVKCAMRAWKRKRRGIAMDDIS 146
+KD F++LA+DG+WDVISN+EA++IVSSTA+R +AKRL++ A+RAWK+KRRG +MDD+S
Sbjct: 289 TKDHFIILASDGIWDVISNQEAIEIVSSTAERPKAAKRLLEQAVRAWKKKRRGYSMDDMS 348
Query: 145 AICLFFHSSTS 113
+CLF HSS+S
Sbjct: 349 VVCLFLHSSSS 359
>dbj|BAB84697.1| protein phosphatase 2C [Arabidopsis thaliana]
Length = 337
Score = 211 bits (538), Expect = 3e-54
Identities = 95/131 (72%), Positives = 120/131 (91%)
Frame = -2
Query: 505 ERILEHQGRVFCLDDEPGVHRVWLPDEESPGLAMSRAFGDYCVKEYGLISVPEVTQRNIT 326
ERI+ +GRVFCL+DEPGVHRVW PD E+PGLAMSRAFGDYC+KEYGL+SVPEVTQR+I+
Sbjct: 193 ERIIGCKGRVFCLNDEPGVHRVWQPDAETPGLAMSRAFGDYCIKEYGLVSVPEVTQRHIS 252
Query: 325 SKDQFVVLATDGVWDVISNEEAVDIVSSTADRTDSAKRLVKCAMRAWKRKRRGIAMDDIS 146
+KD F++LA+DG+WDVISN+EA++IVSSTA+R +AKRLV+ A+RAWK+KRRG +MDD+S
Sbjct: 253 TKDHFIILASDGIWDVISNQEAIEIVSSTAERPKAAKRLVEQAVRAWKKKRRGYSMDDMS 312
Query: 145 AICLFFHSSTS 113
+CLF HSS+S
Sbjct: 313 VVCLFLHSSSS 323
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 462,881,583
Number of Sequences: 1393205
Number of extensions: 10416242
Number of successful extensions: 29916
Number of sequences better than 10.0: 440
Number of HSP's better than 10.0 without gapping: 28969
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29786
length of database: 448,689,247
effective HSP length: 114
effective length of database: 289,863,877
effective search space used: 15652649358
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
