Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC016502A_C01 KMC016502A_c01
(595 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_566620.1| expressed protein; protein id: At3g18860.1, sup... 239 2e-62
dbj|BAA92105.1| unnamed protein product [Homo sapiens] 106 3e-22
pir||T43447 hypothetical protein DKFZp434J1217.1 - human gi|6599... 106 3e-22
ref|XP_131513.1| similar to hypothetical protein DKFZp434J1217.1... 103 1e-21
ref|NP_766283.1| phospholipase A2, activating protein [Mus muscu... 103 1e-21
>ref|NP_566620.1| expressed protein; protein id: At3g18860.1, supported by cDNA:
gi_15294239 [Arabidopsis thaliana]
gi|9294695|dbj|BAB03095.1|
emb|CAB63739.1~gene_id:MCB22.3~similar to unknown
protein [Arabidopsis thaliana]
gi|15294240|gb|AAK95297.1|AF410311_1 AT3g18860/MCB22_3
[Arabidopsis thaliana]
Length = 760
Score = 239 bits (610), Expect = 2e-62
Identities = 106/166 (63%), Positives = 135/166 (80%), Gaps = 3/166 (1%)
Frame = +2
Query: 107 DFKEYQLRCELHGHEDDVRGICVCGNDGIATSSRDKTVRFWS---PENRKFVSSKVLVGH 277
DF EY+LRCELHGH+DDVRGICVC ++ IATSSRD+T+R WS + RK+ S K+L+GH
Sbjct: 6 DFNEYKLRCELHGHDDDVRGICVCNDENIATSSRDRTIRVWSLDPSDKRKYTSEKILLGH 65
Query: 278 SSFVGPLVWIPPNPELPQGGVASGGMDTLVLVWDLSTGEKAHTLKGHQLQVTSIAFDDGD 457
+SFVGPL WIPP E P+G + SG MDT V VW+L GE TLKGHQ+QVT +A D+ D
Sbjct: 66 TSFVGPLAWIPPTDEYPEGRLVSGSMDTFVFVWNLMNGENIQTLKGHQMQVTGVAIDNED 125
Query: 458 VVSASVDCTLRRWKNGQCTETWEAHKAPVQAVIKLPTGELVTGSSD 595
+VS+SVD TL+RW+NGQ E+W+AH++P+QAVI+LP+GELV+GSSD
Sbjct: 126 IVSSSVDQTLKRWRNGQLVESWDAHQSPIQAVIRLPSGELVSGSSD 171
Score = 53.9 bits (128), Expect = 1e-06
Identities = 43/151 (28%), Positives = 69/151 (45%), Gaps = 1/151 (0%)
Frame = +2
Query: 146 HEDDVRGICVCGNDGIATSSRDKTVRFWSPENRKFVSSKVLVGHSSFVGPLVWIPPNPEL 325
H+ ++ + + + + S D +++ W + S + L GH+ V L +
Sbjct: 150 HQSPIQAVIRLPSGELVSGSSDASLKLWKGKT----SLQTLSGHTDTVRGLA------VM 199
Query: 326 PQGGVASGGMDTLVLVWDLSTGEKAHTLKGHQLQVTSI-AFDDGDVVSASVDCTLRRWKN 502
P G S D + +W LS GE + GH V S+ A G +VSAS D + WK+
Sbjct: 200 PDLGFLSASHDGSIRLWALS-GEVLLEMVGHTSLVYSVDAHSSGLIVSASEDRHAKIWKD 258
Query: 503 GQCTETWEAHKAPVQAVIKLPTGELVTGSSD 595
G C ++ E H + L TG++VT SD
Sbjct: 259 GVCVQSLE-HPGCIWDAKFLETGDIVTACSD 288
>dbj|BAA92105.1| unnamed protein product [Homo sapiens]
Length = 544
Score = 106 bits (264), Expect = 3e-22
Identities = 63/165 (38%), Positives = 91/165 (54%), Gaps = 6/165 (3%)
Frame = +2
Query: 119 YQLRCELHGHEDDVRGICVCGND--GIATSSRDKTVRFWSPE--NRKFVSSKVLVGHSSF 286
Y+L C L GHE DVRG+ C + SRD+T R W+P+ NR F + GHS+F
Sbjct: 8 YRLSCSLRGHELDVRGLVCCAYPPGAFVSVSRDRTTRLWAPDSPNRSFTEMHCMSGHSNF 67
Query: 287 VGPLVWIPPNPELPQGGVASGGMDTLVLVWDLSTGEKAHTLKGHQLQVTSIAFDD-GDVV 463
V + IP + P G +A+GG D + ++ L + + LKGH+ V S++ G ++
Sbjct: 68 VSCVCIIPSSDIYPHGLIATGGNDHNICIFSLDSPMPLYILKGHKNTVCSLSSGKFGTLL 127
Query: 464 SASVDCTLRRWKNGQCTETWEAHKAPVQAVIKLP-TGELVTGSSD 595
S S D T + W N +C T + H A V AV LP G ++TGS+D
Sbjct: 128 SGSWDTTAKVWLNDKCMMTLQGHTAAVWAVKILPEQGLMLTGSAD 172
Score = 51.2 bits (121), Expect = 1e-05
Identities = 43/156 (27%), Positives = 63/156 (39%), Gaps = 3/156 (1%)
Frame = +2
Query: 137 LHGHEDDVRGICVCGNDGIA-TSSRDKTVRFWSPENRKFVSSKVLVGHSSFVGPLVWIPP 313
L GH V + + G+ T S DKTV+ W + GH V L +
Sbjct: 147 LQGHTAAVWAVKILPEQGLMLTGSADKTVKLWKAGR----CERTFSGHEDCVRGLAILSE 202
Query: 314 NPELPQGGVASGGMDTLVLVWDLSTGEKAHTLKGHQLQVTSIAFDDG--DVVSASVDCTL 487
L S D + W + TGE GH + SI+ D V+ + D +L
Sbjct: 203 TEFL------SCANDASIRRWQI-TGECLEVYYGHTNYIYSISVFPNCRDFVTTAEDRSL 255
Query: 488 RRWKNGQCTETWEAHKAPVQAVIKLPTGELVTGSSD 595
R WK+G+C +T + L G++V G+SD
Sbjct: 256 RIWKHGECAQTIRLPAQSIWCCCVLDNGDIVVGASD 291
>pir||T43447 hypothetical protein DKFZp434J1217.1 - human
gi|6599218|emb|CAB63739.1| hypothetical protein [Homo
sapiens] gi|21618443|gb|AAH32551.1| Unknown (protein for
MGC:45261) [Homo sapiens]
Length = 795
Score = 106 bits (264), Expect = 3e-22
Identities = 63/165 (38%), Positives = 91/165 (54%), Gaps = 6/165 (3%)
Frame = +2
Query: 119 YQLRCELHGHEDDVRGICVCGND--GIATSSRDKTVRFWSPE--NRKFVSSKVLVGHSSF 286
Y+L C L GHE DVRG+ C + SRD+T R W+P+ NR F + GHS+F
Sbjct: 8 YRLSCSLRGHELDVRGLVCCAYPPGAFVSVSRDRTTRLWAPDSPNRSFTEMHCMSGHSNF 67
Query: 287 VGPLVWIPPNPELPQGGVASGGMDTLVLVWDLSTGEKAHTLKGHQLQVTSIAFDD-GDVV 463
V + IP + P G +A+GG D + ++ L + + LKGH+ V S++ G ++
Sbjct: 68 VSCVCIIPSSDIYPHGLIATGGNDHNICIFSLDSPMPLYILKGHKNTVCSLSSGKFGTLL 127
Query: 464 SASVDCTLRRWKNGQCTETWEAHKAPVQAVIKLP-TGELVTGSSD 595
S S D T + W N +C T + H A V AV LP G ++TGS+D
Sbjct: 128 SGSWDTTAKVWLNDKCMMTLQGHTAAVWAVKILPEQGLMLTGSAD 172
Score = 51.2 bits (121), Expect = 1e-05
Identities = 43/156 (27%), Positives = 63/156 (39%), Gaps = 3/156 (1%)
Frame = +2
Query: 137 LHGHEDDVRGICVCGNDGIA-TSSRDKTVRFWSPENRKFVSSKVLVGHSSFVGPLVWIPP 313
L GH V + + G+ T S DKTV+ W + GH V L +
Sbjct: 147 LQGHTAAVWAVKILPEQGLMLTGSADKTVKLWKAGR----CERTFSGHEDCVRGLAILSE 202
Query: 314 NPELPQGGVASGGMDTLVLVWDLSTGEKAHTLKGHQLQVTSIAFDDG--DVVSASVDCTL 487
L S D + W + TGE GH + SI+ D V+ + D +L
Sbjct: 203 TEFL------SCANDASIRRWQI-TGECLEVYYGHTNYIYSISVFPNCRDFVTTAEDRSL 255
Query: 488 RRWKNGQCTETWEAHKAPVQAVIKLPTGELVTGSSD 595
R WK+G+C +T + L G++V G+SD
Sbjct: 256 RIWKHGECAQTIRLPAQSIWCCCVLDNGDIVVGASD 291
>ref|XP_131513.1| similar to hypothetical protein DKFZp434J1217.1 - human [Mus
musculus]
Length = 794
Score = 103 bits (258), Expect = 1e-21
Identities = 63/165 (38%), Positives = 92/165 (55%), Gaps = 6/165 (3%)
Frame = +2
Query: 119 YQLRCELHGHEDDVRGI--CVCGNDGIATSSRDKTVRFWSPE--NRKFVSSKVLVGHSSF 286
Y+L C L GHE DVRG+ C+ + SRD+T R W+P+ NR F + GHS+F
Sbjct: 8 YRLSCSLPGHELDVRGLVCCLYPPGAFVSVSRDRTTRLWAPDSPNRGFTEMHCMSGHSNF 67
Query: 287 VGPLVWIPPNPELPQGGVASGGMDTLVLVWDLSTGEKAHTLKGHQLQVTSIAFDD-GDVV 463
V + IP + P G +A+GG D + ++ L + + LKGH+ V S++ G ++
Sbjct: 68 VSCVCIIPSSDIYPHGLIATGGNDHNICIFSLDSPMPLYILKGHKDTVCSLSSGKFGTLL 127
Query: 464 SASVDCTLRRWKNGQCTETWEAHKAPVQAVIKLP-TGELVTGSSD 595
S S D T + W N +C T + H A V AV LP G ++TGS+D
Sbjct: 128 SGSWDTTAKVWLNDKCMMTLQGHTAAVWAVKILPEQGLMLTGSAD 172
Score = 52.8 bits (125), Expect = 3e-06
Identities = 42/156 (26%), Positives = 65/156 (40%), Gaps = 3/156 (1%)
Frame = +2
Query: 137 LHGHEDDVRGICVCGNDGIA-TSSRDKTVRFWSPENRKFVSSKVLVGHSSFVGPLVWIPP 313
L GH V + + G+ T S DKT++ W + +GH V L +
Sbjct: 147 LQGHTAAVWAVKILPEQGLMLTGSADKTIKLWKAGR----CERTFLGHEDCVRGLAILSE 202
Query: 314 NPELPQGGVASGGMDTLVLVWDLSTGEKAHTLKGHQLQVTSIAF--DDGDVVSASVDCTL 487
L S D + W + TGE GH + SI+ + D V+ + D +L
Sbjct: 203 TEFL------SCANDASIRRWQI-TGECLEVYFGHTNYIYSISVFPNSKDFVTTAEDRSL 255
Query: 488 RRWKNGQCTETWEAHKAPVQAVIKLPTGELVTGSSD 595
R WK+G+C +T + L G++V G+SD
Sbjct: 256 RIWKHGECAQTIRLPAQSIWCCCVLENGDIVVGASD 291
>ref|NP_766283.1| phospholipase A2, activating protein [Mus musculus]
gi|26344830|dbj|BAC36064.1| unnamed protein product [Mus
musculus]
Length = 794
Score = 103 bits (258), Expect = 1e-21
Identities = 63/165 (38%), Positives = 92/165 (55%), Gaps = 6/165 (3%)
Frame = +2
Query: 119 YQLRCELHGHEDDVRGI--CVCGNDGIATSSRDKTVRFWSPE--NRKFVSSKVLVGHSSF 286
Y+L C L GHE DVRG+ C+ + SRD+T R W+P+ NR F + GHS+F
Sbjct: 8 YRLSCSLPGHELDVRGLVCCLYPPGAFVSVSRDRTTRLWAPDSPNRGFTEMHCMSGHSNF 67
Query: 287 VGPLVWIPPNPELPQGGVASGGMDTLVLVWDLSTGEKAHTLKGHQLQVTSIAFDD-GDVV 463
V + IP + P G +A+GG D + ++ L + + LKGH+ V S++ G ++
Sbjct: 68 VSCVCIIPSSDIYPHGLIATGGNDHNICIFSLDSPMPLYILKGHKDTVCSLSSGKFGTLL 127
Query: 464 SASVDCTLRRWKNGQCTETWEAHKAPVQAVIKLP-TGELVTGSSD 595
S S D T + W N +C T + H A V AV LP G ++TGS+D
Sbjct: 128 SGSWDTTAKVWLNDKCMMTLQGHTAAVWAVKILPEQGLMLTGSAD 172
Score = 52.8 bits (125), Expect = 3e-06
Identities = 42/156 (26%), Positives = 65/156 (40%), Gaps = 3/156 (1%)
Frame = +2
Query: 137 LHGHEDDVRGICVCGNDGIA-TSSRDKTVRFWSPENRKFVSSKVLVGHSSFVGPLVWIPP 313
L GH V + + G+ T S DKT++ W + +GH V L +
Sbjct: 147 LQGHTAAVWAVKILPEQGLMLTGSADKTIKLWKAGR----CERTFLGHEDCVRGLAILSE 202
Query: 314 NPELPQGGVASGGMDTLVLVWDLSTGEKAHTLKGHQLQVTSIAF--DDGDVVSASVDCTL 487
L S D + W + TGE GH + SI+ + D V+ + D +L
Sbjct: 203 TEFL------SCANDASIRRWQI-TGECLEVYFGHTNYIYSISVFPNSKDFVTTAEDRSL 255
Query: 488 RRWKNGQCTETWEAHKAPVQAVIKLPTGELVTGSSD 595
R WK+G+C +T + L G++V G+SD
Sbjct: 256 RIWKHGECAQTIRLPAQSIWCCCVLENGDIVVGASD 291
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 567,101,728
Number of Sequences: 1393205
Number of extensions: 13266594
Number of successful extensions: 55416
Number of sequences better than 10.0: 1851
Number of HSP's better than 10.0 without gapping: 45838
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 52618
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 22854740960
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
