>KMC016501A_C01 KMC016501A_c01
AAACTTTCAATGCTTCAATTGATGAGCCAGTTCAAAGTTTACTATCACAAAATATTTCAA
ATTACATGAAAAGGTGATGGAACCTGCAGGGTAATAAACTTTCTGTGGCTGCACTCCACC
TCTTGTCAGTAACTTTATCTATAAGCTGCATCTACTCAAATTGTTCTAAGTTGGACAGGT
AGTGACCAAACTCGCGTTCTAAACTTTATATGGCTGCACTCCACCTCTTGTCAGTAACTT
TATCTATAAGCTGCATCTACTCAAATTGTTCTAAGTTGGACGGGTAGTGATCAAACTCGC
ATTCTAAACTTTCTATGGCTGCAGACTTTACTGCTTGCAGGCAATTCTGGTTACTGAAGT
CACATTTTATCCACGCTCCGATTTACTGTCTGGTTTGCATTGCAGAGTGCAGGACTCAAA
TCAGAACGTCTGATCTTGTATTGTGAATTGAACAATTTCTATAACATTTATTCTTTGTGG
TGCAGGTCTAATATCAAAAGATAAATGCACTCTTCAAGCTTCGTT

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KMC016501A_C01 KMC016501A_c01
         (525 letters)

Database: nr 
           1,393,205 sequences; 448,689,247 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_012438.1| Protein required for cell viability; Yjl097wp [...    35  0.41

>ref|NP_012438.1| Protein required for cell viability; Yjl097wp [Saccharomyces
           cerevisiae] gi|731974|sp|P40857|YJJ7_YEAST Hypothetical
           24.5 kDa protein in SAP185-BCK1 intergenic region
           gi|1078243|pir||S50296 probable membrane protein YJL097w
           - yeast (Saccharomyces cerevisiae)
           gi|640006|emb|CAA54893.1| J0902 [Saccharomyces
           cerevisiae] gi|1008274|emb|CAA89391.1| ORF YJL097w
           [Saccharomyces cerevisiae]
          Length = 217

 Score = 35.4 bits (80), Expect = 0.41
 Identities = 23/71 (32%), Positives = 39/71 (54%)
 Frame = +1

Query: 265 IVLSWTGSDQTRILNFLWLQTLLLAGNSGY*SHILSTLRFTVWFALQSAGLKSERLILYC 444
           ++L+W+    T I+ +L+   +L+  N      IL  LR+ +++ L   G+ SE  I+YC
Sbjct: 108 LLLAWS---ITEIVRYLYYFFMLVFKNGA--PKILILLRYNLFWILYPTGVASELRIIYC 162

Query: 445 ELNNFYNIYSL 477
            LN   + YSL
Sbjct: 163 ALNAAESQYSL 173

  Database: nr
    Posted date:  Apr 1, 2003  2:05 AM
  Number of letters in database: 448,689,247
  Number of sequences in database:  1,393,205
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 404,800,350
Number of Sequences: 1393205
Number of extensions: 7479973
Number of successful extensions: 13026
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 12119
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13020
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 17019769648
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

EST assemble image

clone accession position 1 SPDL029e08_f BP053812 1 525 2 SPDL042d04_f BP054643 1 494 3 SPDL039a08_f BP054427 5 472

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