>KMC016481A_C01 KMC016481A_c01
AAACAAATGCCTTTTATTGAAAATATTACAGACTTTACAGAAAAAAAATGGGTAATATAA
AAATGAATTCAAAAGAATTTTTGTCCTTTTTTTTCTTTCTTCAGTTCTGAATACCTAAGT
AACAGCCTTTCACCTCCCCCCTCTTATCCTTTTCATTCCAAATTTCCTTCCATGTATGCT
CTATCTGATACCCCTACTTGCTAGAAGAACTTATCAAATTAATCAATTACTTAAATTTTG
AGAAGCATGGAAAAGTACTTACTGGTTAATGGGATTCCAATCCATTTCTAATGGACTCAA
GGACCTGGACAACCTCAGCCATGCTTGGTCTCCTTAAAGGATCCTCCGAAGTACAAATTA
GCCCCAATTTCATAACCTGAATCAATTCATTCTCAGCAAAGCCTACTAAATTTCTGTCAA
AGCAATTTGAAGCTGAGCCAGTCTCCAACAAACCTCTTACATATTCACACAAAACCACCA
CCTCATTTGAGGTTGGACTTTCAACTGGCTTTCTCCCTGTAACCAGCTCCAAAAGAATGA
CCCCGAAACTGTAAACATCACACTTCTCACTCTGCCTCATGCTCTGAGCCAACTCAGGTG
CAACATATCCAACAACATTGTGAAACTTGGTCAGACCATAATTATC

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KMC016481A_C01 KMC016481A_c01
         (646 letters)

Database: nr 
           1,393,205 sequences; 448,689,247 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_176483.1| leucine-rich repeat transmembrane protein kinas...   202  4e-51
gb|AAF79640.1|AC025416_14 F5O11.21 [Arabidopsis thaliana]             195  5e-49
gb|AAO22764.1| putative leucine-rich repeat transmembrane protei...   195  5e-49
ref|NP_172708.1| leucine-rich repeat transmembrane protein kinas...   195  5e-49
gb|AAF88073.1|AC025417_1 T12C24.1 [Arabidopsis thaliana]              195  5e-49

>ref|NP_176483.1| leucine-rich repeat transmembrane protein kinase, putative; protein
            id: At1g62950.1 [Arabidopsis thaliana]
            gi|25404381|pir||C96654 hypothetical protein F16P17.10
            [imported] - Arabidopsis thaliana
            gi|8493583|gb|AAF75806.1|AC011000_9 Contains strong
            similarity to CLV1 receptor kinase from Arabidopsis
            thaliana gb|U96879, and contains a Eukaryotic Kinase
            PF|00069 domain and multiple Leucine Rich Repeats
            PF|00560
          Length = 890

 Score =  202 bits (513), Expect = 4e-51
 Identities = 98/122 (80%), Positives = 113/122 (92%)
 Frame = -1

Query: 637  GLTKFHNVVGYVAPELAQSMRQSEKCDVYSFGVILLELVTGRKPVESPTSNEVVVLCEYV 458
            GLTKFHN VGY+APELAQS+R S+KCDVYS+GV+LLELVTGRKPVESP+ NEVV+L ++V
Sbjct: 769  GLTKFHNAVGYIAPELAQSLRVSDKCDVYSYGVVLLELVTGRKPVESPSENEVVILRDHV 828

Query: 457  RGLLETGSASNCFDRNLVGFAENELIQVMKLGLICTSEDPLRRPSMAEVVQVLESIRNGL 278
            R LLETGSAS+CFDR L GF ENELIQVMKLGLICT+E+PL+RPS+AEVVQVLE IRNG+
Sbjct: 829  RNLLETGSASDCFDRRLRGFEENELIQVMKLGLICTTENPLKRPSIAEVVQVLELIRNGM 888

Query: 277  ES 272
            ES
Sbjct: 889  ES 890

>gb|AAF79640.1|AC025416_14 F5O11.21 [Arabidopsis thaliana]
          Length = 893

 Score =  195 bits (495), Expect = 5e-49
 Identities = 99/127 (77%), Positives = 114/127 (88%), Gaps = 2/127 (1%)
 Frame = -1

Query: 646  DNYGLTK-FHNVVGYVAPELAQ-SMRQSEKCDVYSFGVILLELVTGRKPVESPTSNEVVV 473
            D++GLTK FHN VGY+APELAQ S+R SEKCDVYS+GV+LLELVTGRKPVESP+ N+V++
Sbjct: 767  DSFGLTKKFHNAVGYIAPELAQQSLRASEKCDVYSYGVVLLELVTGRKPVESPSENQVLI 826

Query: 472  LCEYVRGLLETGSASNCFDRNLVGFAENELIQVMKLGLICTSEDPLRRPSMAEVVQVLES 293
            L +YVR LLETGSAS+CFDR L  F ENELIQVMKLGL+CTSE+PL+RPSMAEVVQVLES
Sbjct: 827  LRDYVRDLLETGSASDCFDRRLREFEENELIQVMKLGLLCTSENPLKRPSMAEVVQVLES 886

Query: 292  IRNGLES 272
            IRNG  S
Sbjct: 887  IRNGFGS 893

>gb|AAO22764.1| putative leucine-rich repeat transmembrane protein kinase
            [Arabidopsis thaliana]
          Length = 882

 Score =  195 bits (495), Expect = 5e-49
 Identities = 99/127 (77%), Positives = 114/127 (88%), Gaps = 2/127 (1%)
 Frame = -1

Query: 646  DNYGLTK-FHNVVGYVAPELAQ-SMRQSEKCDVYSFGVILLELVTGRKPVESPTSNEVVV 473
            D++GLTK FHN VGY+APELAQ S+R SEKCDVYS+GV+LLELVTGRKPVESP+ N+V++
Sbjct: 756  DSFGLTKKFHNAVGYIAPELAQQSLRASEKCDVYSYGVVLLELVTGRKPVESPSENQVLI 815

Query: 472  LCEYVRGLLETGSASNCFDRNLVGFAENELIQVMKLGLICTSEDPLRRPSMAEVVQVLES 293
            L +YVR LLETGSAS+CFDR L  F ENELIQVMKLGL+CTSE+PL+RPSMAEVVQVLES
Sbjct: 816  LRDYVRDLLETGSASDCFDRRLREFEENELIQVMKLGLLCTSENPLKRPSMAEVVQVLES 875

Query: 292  IRNGLES 272
            IRNG  S
Sbjct: 876  IRNGFGS 882

>ref|NP_172708.1| leucine-rich repeat transmembrane protein kinase, putative; protein
            id: At1g12460.1 [Arabidopsis thaliana]
          Length = 882

 Score =  195 bits (495), Expect = 5e-49
 Identities = 99/127 (77%), Positives = 114/127 (88%), Gaps = 2/127 (1%)
 Frame = -1

Query: 646  DNYGLTK-FHNVVGYVAPELAQ-SMRQSEKCDVYSFGVILLELVTGRKPVESPTSNEVVV 473
            D++GLTK FHN VGY+APELAQ S+R SEKCDVYS+GV+LLELVTGRKPVESP+ N+V++
Sbjct: 756  DSFGLTKKFHNAVGYIAPELAQQSLRASEKCDVYSYGVVLLELVTGRKPVESPSENQVLI 815

Query: 472  LCEYVRGLLETGSASNCFDRNLVGFAENELIQVMKLGLICTSEDPLRRPSMAEVVQVLES 293
            L +YVR LLETGSAS+CFDR L  F ENELIQVMKLGL+CTSE+PL+RPSMAEVVQVLES
Sbjct: 816  LRDYVRDLLETGSASDCFDRRLREFEENELIQVMKLGLLCTSENPLKRPSMAEVVQVLES 875

Query: 292  IRNGLES 272
            IRNG  S
Sbjct: 876  IRNGFGS 882

>gb|AAF88073.1|AC025417_1 T12C24.1 [Arabidopsis thaliana]
          Length = 221

 Score =  195 bits (495), Expect = 5e-49
 Identities = 99/127 (77%), Positives = 114/127 (88%), Gaps = 2/127 (1%)
 Frame = -1

Query: 646 DNYGLTK-FHNVVGYVAPELAQ-SMRQSEKCDVYSFGVILLELVTGRKPVESPTSNEVVV 473
           D++GLTK FHN VGY+APELAQ S+R SEKCDVYS+GV+LLELVTGRKPVESP+ N+V++
Sbjct: 95  DSFGLTKKFHNAVGYIAPELAQQSLRASEKCDVYSYGVVLLELVTGRKPVESPSENQVLI 154

Query: 472 LCEYVRGLLETGSASNCFDRNLVGFAENELIQVMKLGLICTSEDPLRRPSMAEVVQVLES 293
           L +YVR LLETGSAS+CFDR L  F ENELIQVMKLGL+CTSE+PL+RPSMAEVVQVLES
Sbjct: 155 LRDYVRDLLETGSASDCFDRRLREFEENELIQVMKLGLLCTSENPLKRPSMAEVVQVLES 214

Query: 292 IRNGLES 272
           IRNG  S
Sbjct: 215 IRNGFGS 221

  Database: nr
    Posted date:  Apr 1, 2003  2:05 AM
  Number of letters in database: 448,689,247
  Number of sequences in database:  1,393,205
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 561,304,822
Number of Sequences: 1393205
Number of extensions: 12217298
Number of successful extensions: 40235
Number of sequences better than 10.0: 3982
Number of HSP's better than 10.0 without gapping: 36795
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38953
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 27291941472
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

EST assemble image

clone accession position 1 SPDL010e08_f BP052606 1 536 2 SPDL029d08_f BP053801 20 491 3 SPDL054e05_f BP055413 153 666

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