Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC016422A_C01 KMC016422A_c01
(519 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_195809.1| leucine-rich repeat transmembrane protein kinas... 153 1e-36
dbj|BAB85306.1| P0703B11.26 [Oryza sativa (japonica cultivar-gro... 149 2e-35
ref|NP_191196.1| leucine-rich repeat transmembrane protein kinas... 144 5e-34
gb|AAL49790.1| unknown protein [Arabidopsis thaliana] 144 5e-34
dbj|BAB01126.1| receptor protein kinase [Arabidopsis thaliana] 114 9e-25
>ref|NP_195809.1| leucine-rich repeat transmembrane protein kinase, putative; protein
id: At5g01890.1, supported by cDNA: gi_15983377
[Arabidopsis thaliana] gi|11358137|pir||T48210
hypothetical protein T20L15.160 - Arabidopsis thaliana
gi|7329662|emb|CAB82759.1| putative protein [Arabidopsis
thaliana] gi|15983378|gb|AAL11557.1|AF424563_1
AT5g01890/T20L15_160 [Arabidopsis thaliana]
gi|28416471|gb|AAO42766.1| At5g01890/T20L15_160
[Arabidopsis thaliana]
Length = 967
Score = 153 bits (386), Expect = 1e-36
Identities = 74/101 (73%), Positives = 83/101 (81%)
Frame = -3
Query: 517 EKCDVYGFGILILEXVTGKRPVEYLEDDXVVLCELVRGPLEEGKVDPCVDGRLLGNFAAE 338
++CDVYGFGIL+LE VTGKRPVEY EDD VVLCE VR LEEG+V+ CVD RL GNF AE
Sbjct: 867 DRCDVYGFGILVLEVVTGKRPVEYAEDDVVVLCETVREGLEEGRVEECVDPRLRGNFPAE 926
Query: 337 EAIPVMKLGLICASPVPSNRPDMAEVLNILELIPCPSEGPE 215
EAIPV+KLGL+C S VPSNRP+M EV+ ILELI CPS E
Sbjct: 927 EAIPVIKLGLVCGSQVPSNRPEMEEVVKILELIQCPSHDLE 967
>dbj|BAB85306.1| P0703B11.26 [Oryza sativa (japonica cultivar-group)]
gi|19571061|dbj|BAB86487.1| P0485B12.18 [Oryza sativa
(japonica cultivar-group)]
Length = 947
Score = 149 bits (375), Expect = 2e-35
Identities = 67/102 (65%), Positives = 84/102 (81%)
Frame = -3
Query: 517 EKCDVYGFGILILEXVTGKRPVEYLEDDXVVLCELVRGPLEEGKVDPCVDGRLLGNFAAE 338
EKCDVYGFG+L+LE +TG+RPVEYLEDD VVLC+LVR LEEG+++ C+D RL G F E
Sbjct: 843 EKCDVYGFGVLVLEVLTGRRPVEYLEDDVVVLCDLVRSALEEGRLEDCMDPRLCGEFPME 902
Query: 337 EAIPVMKLGLICASPVPSNRPDMAEVLNILELIPCPSEGPEE 212
EA+P++KLGL+C S VPSNRPDM EV+NILEL+ P + E+
Sbjct: 903 EALPIIKLGLVCTSRVPSNRPDMGEVVNILELVRSPQDSLED 944
>ref|NP_191196.1| leucine-rich repeat transmembrane protein kinase, putative; protein
id: At3g56370.1, supported by cDNA: gi_17979044,
supported by cDNA: gi_19032340 [Arabidopsis thaliana]
gi|11358383|pir||T49038 hypothetical protein T5P19.20 -
Arabidopsis thaliana gi|7594515|emb|CAB88040.1| putative
protein [Arabidopsis thaliana]
gi|19032341|dbj|BAB85646.1| inflorescence and root apices
receptor-like kinase [Arabidopsis thaliana]
gi|19032343|dbj|BAB85647.1| inflorescence and root apices
receptor-like kinase [Arabidopsis thaliana]
Length = 964
Score = 144 bits (364), Expect = 5e-34
Identities = 66/103 (64%), Positives = 81/103 (78%)
Frame = -3
Query: 517 EKCDVYGFGILILEXVTGKRPVEYLEDDXVVLCELVRGPLEEGKVDPCVDGRLLGNFAAE 338
EKCDVYGFG+L+LE VTGK+PVEY+EDD VVLC++VR LE+G+ D C+D RL G F E
Sbjct: 859 EKCDVYGFGVLVLEVVTGKKPVEYMEDDVVVLCDMVREALEDGRADECIDPRLQGKFPVE 918
Query: 337 EAIPVMKLGLICASPVPSNRPDMAEVLNILELIPCPSEGPEEL 209
EA+ V+KLGLIC S VPS+RP M E +NIL +I CPS +EL
Sbjct: 919 EAVAVIKLGLICTSQVPSSRPHMGEAVNILRMIRCPSGSSDEL 961
>gb|AAL49790.1| unknown protein [Arabidopsis thaliana]
Length = 964
Score = 144 bits (364), Expect = 5e-34
Identities = 66/103 (64%), Positives = 81/103 (78%)
Frame = -3
Query: 517 EKCDVYGFGILILEXVTGKRPVEYLEDDXVVLCELVRGPLEEGKVDPCVDGRLLGNFAAE 338
EKCDVYGFG+L+LE VTGK+PVEY+EDD VVLC++VR LE+G+ D C+D RL G F E
Sbjct: 859 EKCDVYGFGVLVLEVVTGKKPVEYMEDDVVVLCDMVREALEDGRADECIDPRLQGKFPVE 918
Query: 337 EAIPVMKLGLICASPVPSNRPDMAEVLNILELIPCPSEGPEEL 209
EA+ V+KLGLIC S VPS+RP M E +NIL +I CPS +EL
Sbjct: 919 EAVAVIKLGLICTSQVPSSRPHMGEAVNILRMIRCPSGSSDEL 961
>dbj|BAB01126.1| receptor protein kinase [Arabidopsis thaliana]
Length = 1016
Score = 114 bits (284), Expect = 9e-25
Identities = 53/96 (55%), Positives = 71/96 (73%)
Frame = -3
Query: 517 EKCDVYGFGILILEXVTGKRPVEYLEDDXVVLCELVRGPLEEGKVDPCVDGRLLGNFAAE 338
EKCDVYGFG+LILE VTG+RPVEY ED V+L + VR LE+G V C+D + ++ +
Sbjct: 912 EKCDVYGFGVLILELVTGRRPVEYGEDSFVILSDHVRVMLEQGNVLECIDPVMEEQYSED 971
Query: 337 EAIPVMKLGLICASPVPSNRPDMAEVLNILELIPCP 230
E +PV+KL L+C S +PSNRP MAE++ IL++I P
Sbjct: 972 EVLPVLKLALVCTSQIPSNRPTMAEIVQILQVINSP 1007
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 504,993,298
Number of Sequences: 1393205
Number of extensions: 12547717
Number of successful extensions: 56325
Number of sequences better than 10.0: 1889
Number of HSP's better than 10.0 without gapping: 45219
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 53375
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 16442828304
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
