Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC016380A_C01 KMC016380A_c01
(538 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EAA05169.1| agCP7003 [Anopheles gambiae str. PEST] 31 8.3
>gb|EAA05169.1| agCP7003 [Anopheles gambiae str. PEST]
Length = 1339
Score = 31.2 bits (69), Expect = 8.3
Identities = 14/49 (28%), Positives = 28/49 (56%)
Frame = -2
Query: 528 HQIKAQLQKQLQSILMTQAQEKGIELKTTQLNSQAHSLGIGYLDCISMG 382
H+ A+L+K+ + +L T+A+ +L +N+ +HS G +S+G
Sbjct: 1206 HETLAELEKKYKKVLSTEAEPHWTQLYDASINTCSHSYWKGQCRNVSLG 1254
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 431,100,112
Number of Sequences: 1393205
Number of extensions: 8771590
Number of successful extensions: 17821
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 17011
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17711
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 18173652336
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
