KMC016347A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KMC016347A_C01 KMC016347A_c01
gcaagaaaataaacgcaattgttcttTCACATTCAAAATTAAATAAAAATACTTATAGTG
ATGCAACAGTCCAGTTCCCAGAAATAGATCTCTTAGTCTATCTAAGAGTCAAATATATAA
TCAACAAGTTCCGGGTTAGTCCAATTTGTCAAATGAAGCAAAGTACTGACCAAAGTCTTG
CCAGTACATTTCTCTTGACTTGAAAGCTAAAGGAAATCTTGAGTTCATTCAAGCTTCCTT
CCTAGTTATCCTGAAGCAATATATTCCCAGGGGCATTTGTAATTTCATGAATGACAGACG
TTGCGAAATGCATGTAAACCGTCCCTGTAAATGCACAGTAACCAAGAAGAACTAGTCTCT
CATTCACTAAAGGAACCCCATCATTTAGCCTTGATGCAAGCGCATTTGCAATGGCAAATG
GGAGATACATGAGGGACATGCACATTCCGGTTTTTAAGCCCTTAGGTTCATCGCATACGT
GGGCCAAAATCATCCTTCCCA


Nr search

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KMC016347A_C01 KMC016347A_c01
         (501 letters)

Database: nr 
           1,393,205 sequences; 448,689,247 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

pir||T06384 probable ethanolaminephosphotransferase (EC 2.7.8.1)...   142  2e-36
gb|AAC79507.1| aminoalcoholphosphotransferase [Pimpinella brachy...   133  1e-33
pir||T14412 ethanolaminephosphotransferase homolog - turnip gi|2...   130  8e-33
ref|NP_189186.1| hypothetical protein; protein id: At3g25585.1, ...   130  1e-32
ref|NP_172813.1| aminoalcoholphosphotransferase; protein id: At1...   129  2e-32

>pir||T06384 probable ethanolaminephosphotransferase (EC 2.7.8.1) - soybean
           gi|530088|gb|AAA67719.1| aminoalcoholphosphotransferase
          Length = 389

 Score =  142 bits (359), Expect(2) = 2e-36
 Identities = 68/78 (87%), Positives = 74/78 (94%)
 Frame = -3

Query: 499 GRMILAHVCDEPKGLKTGMCMSLMYLPFAIANALASRLNDGVPLVNERLVLLGYCAFTGT 320
           GRMILAH+CDEPKGLKTGMCMSLM+LP AIAN LASRLNDGVPLV+ERLVLLGYCAF+ T
Sbjct: 301 GRMILAHLCDEPKGLKTGMCMSLMFLPLAIANVLASRLNDGVPLVDERLVLLGYCAFSVT 360

Query: 319 VYMHFATSVIHEITNAPG 266
           +Y+HFATSVIHEITNA G
Sbjct: 361 LYLHFATSVIHEITNALG 378

 Score = 31.2 bits (69), Expect(2) = 2e-36
 Identities = 13/13 (100%), Positives = 13/13 (100%)
 Frame = -1

Query: 270 LGIYCFRITRKEA 232
           LGIYCFRITRKEA
Sbjct: 377 LGIYCFRITRKEA 389

>gb|AAC79507.1| aminoalcoholphosphotransferase [Pimpinella brachycarpa]
          Length = 389

 Score =  133 bits (334), Expect(2) = 1e-33
 Identities = 60/78 (76%), Positives = 69/78 (87%)
 Frame = -3

Query: 499 GRMILAHVCDEPKGLKTGMCMSLMYLPFAIANALASRLNDGVPLVNERLVLLGYCAFTGT 320
           GRM+LAH+CDEPKGLKT MC+SL+YLPFAIAN L +RLNDGVPLV E+ VLLGYC +TG 
Sbjct: 301 GRMVLAHLCDEPKGLKTNMCLSLLYLPFAIANTLTARLNDGVPLVEEKWVLLGYCVYTGA 360

Query: 319 VYMHFATSVIHEITNAPG 266
           +Y+HFATSVIHEIT A G
Sbjct: 361 LYLHFATSVIHEITTALG 378

 Score = 31.2 bits (69), Expect(2) = 1e-33
 Identities = 13/13 (100%), Positives = 13/13 (100%)
 Frame = -1

Query: 270 LGIYCFRITRKEA 232
           LGIYCFRITRKEA
Sbjct: 377 LGIYCFRITRKEA 389

>pir||T14412 ethanolaminephosphotransferase homolog - turnip
           gi|2072356|gb|AAB53764.1| aminoalcoholphosphotransferase
           [Brassica rapa]
          Length = 389

 Score =  130 bits (327), Expect(2) = 8e-33
 Identities = 61/78 (78%), Positives = 70/78 (89%)
 Frame = -3

Query: 499 GRMILAHVCDEPKGLKTGMCMSLMYLPFAIANALASRLNDGVPLVNERLVLLGYCAFTGT 320
           GRMILAH+CDEPKGLKT MC+SL+YLPFA+ANAL +RLNDGVPLV+E  VLLGYC FT +
Sbjct: 301 GRMILAHLCDEPKGLKTNMCLSLVYLPFALANALTARLNDGVPLVDELWVLLGYCIFTVS 360

Query: 319 VYMHFATSVIHEITNAPG 266
           +Y+HFATSVIHEIT A G
Sbjct: 361 LYLHFATSVIHEITTALG 378

 Score = 31.2 bits (69), Expect(2) = 8e-33
 Identities = 13/13 (100%), Positives = 13/13 (100%)
 Frame = -1

Query: 270 LGIYCFRITRKEA 232
           LGIYCFRITRKEA
Sbjct: 377 LGIYCFRITRKEA 389

>ref|NP_189186.1| hypothetical protein; protein id: At3g25585.1, supported by cDNA:
           gi_13430477, supported by cDNA: gi_15810001, supported
           by cDNA: gi_3661594, supported by cDNA: gi_13430477,
           supported by cDNA: gi_15810001, supported by cDNA:
           gi_3661594 [Arabidopsis thaliana]
           gi|3661595|gb|AAC61769.1| aminoalcoholphosphotransferase
           [Arabidopsis thaliana]
           gi|13430478|gb|AAK25861.1|AF360151_1 putative
           aminoalcoholphosphotransferase [Arabidopsis thaliana]
           gi|15810002|gb|AAL06928.1| AT3g25585/MWL2_21
           [Arabidopsis thaliana] gi|23296820|gb|AAN13178.1|
           putative aminoalcoholphosphotransferase [Arabidopsis
           thaliana]
          Length = 389

 Score =  130 bits (326), Expect(2) = 1e-32
 Identities = 62/78 (79%), Positives = 69/78 (87%)
 Frame = -3

Query: 499 GRMILAHVCDEPKGLKTGMCMSLMYLPFAIANALASRLNDGVPLVNERLVLLGYCAFTGT 320
           GRMILAH+CDEPKGLKT MCMSL+YLPFA+ANAL +RLNDGVPLV+E  VLLGYC FT +
Sbjct: 301 GRMILAHLCDEPKGLKTNMCMSLLYLPFALANALTARLNDGVPLVDEFWVLLGYCIFTLS 360

Query: 319 VYMHFATSVIHEITNAPG 266
           +Y HFATSVIHEIT A G
Sbjct: 361 LYAHFATSVIHEITTALG 378

 Score = 31.2 bits (69), Expect(2) = 1e-32
 Identities = 13/13 (100%), Positives = 13/13 (100%)
 Frame = -1

Query: 270 LGIYCFRITRKEA 232
           LGIYCFRITRKEA
Sbjct: 377 LGIYCFRITRKEA 389

>ref|NP_172813.1| aminoalcoholphosphotransferase; protein id: At1g13560.1, supported
           by cDNA: gi_19347829, supported by cDNA: gi_21280904,
           supported by cDNA: gi_3661592 [Arabidopsis thaliana]
           gi|25346060|pir||F86268 aminoalcoholphosphotransferase
           [imported] - Arabidopsis thaliana
           gi|3661593|gb|AAC61768.1| aminoalcoholphosphotransferase
           [Arabidopsis thaliana]
           gi|9802754|gb|AAF99823.1|AC027134_5
           aminoalcoholphosphotransferase [Arabidopsis thaliana]
           gi|19347830|gb|AAL86327.1| putative
           aminoalcoholphosphotransferase [Arabidopsis thaliana]
           gi|21280905|gb|AAM45110.1| putative
           aminoalcoholphosphotransferase [Arabidopsis thaliana]
          Length = 389

 Score =  129 bits (323), Expect(2) = 2e-32
 Identities = 61/78 (78%), Positives = 69/78 (88%)
 Frame = -3

Query: 499 GRMILAHVCDEPKGLKTGMCMSLMYLPFAIANALASRLNDGVPLVNERLVLLGYCAFTGT 320
           GRMILAH+CDEPKGLKT MCMSL+YLPFA+ANAL +RLN GVPLV+E  VLLGYC FT +
Sbjct: 301 GRMILAHLCDEPKGLKTNMCMSLLYLPFALANALTARLNAGVPLVDELWVLLGYCIFTVS 360

Query: 319 VYMHFATSVIHEITNAPG 266
           +Y+HFATSVIHEIT A G
Sbjct: 361 LYLHFATSVIHEITEALG 378

 Score = 31.2 bits (69), Expect(2) = 2e-32
 Identities = 13/13 (100%), Positives = 13/13 (100%)
 Frame = -1

Query: 270 LGIYCFRITRKEA 232
           LGIYCFRITRKEA
Sbjct: 377 LGIYCFRITRKEA 389

  Database: nr
    Posted date:  Apr 1, 2003  2:05 AM
  Number of letters in database: 448,689,247
  Number of sequences in database:  1,393,205
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 400,054,914
Number of Sequences: 1393205
Number of extensions: 7921114
Number of successful extensions: 16538
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 16237
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16533
length of database: 448,689,247
effective HSP length: 114
effective length of database: 289,863,877
effective search space used: 15072921604
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)


EST assemble image


clone accession position
1 MWM249e10_f AV768557 1 322
2 SPD092d08_f BP051341 27 503




Lotus japonicus
Kazusa DNA Research Institute