KMC016347A_c01
[Fasta Sequence]
[Nr Search]
[EST assemble image]
Fasta Sequence
>KMC016347A_C01 KMC016347A_c01
gcaagaaaataaacgcaattgttcttTCACATTCAAAATTAAATAAAAATACTTATAGTG
ATGCAACAGTCCAGTTCCCAGAAATAGATCTCTTAGTCTATCTAAGAGTCAAATATATAA
TCAACAAGTTCCGGGTTAGTCCAATTTGTCAAATGAAGCAAAGTACTGACCAAAGTCTTG
CCAGTACATTTCTCTTGACTTGAAAGCTAAAGGAAATCTTGAGTTCATTCAAGCTTCCTT
CCTAGTTATCCTGAAGCAATATATTCCCAGGGGCATTTGTAATTTCATGAATGACAGACG
TTGCGAAATGCATGTAAACCGTCCCTGTAAATGCACAGTAACCAAGAAGAACTAGTCTCT
CATTCACTAAAGGAACCCCATCATTTAGCCTTGATGCAAGCGCATTTGCAATGGCAAATG
GGAGATACATGAGGGACATGCACATTCCGGTTTTTAAGCCCTTAGGTTCATCGCATACGT
GGGCCAAAATCATCCTTCCCA
Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC016347A_C01 KMC016347A_c01
(501 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T06384 probable ethanolaminephosphotransferase (EC 2.7.8.1)... 142 2e-36
gb|AAC79507.1| aminoalcoholphosphotransferase [Pimpinella brachy... 133 1e-33
pir||T14412 ethanolaminephosphotransferase homolog - turnip gi|2... 130 8e-33
ref|NP_189186.1| hypothetical protein; protein id: At3g25585.1, ... 130 1e-32
ref|NP_172813.1| aminoalcoholphosphotransferase; protein id: At1... 129 2e-32
>pir||T06384 probable ethanolaminephosphotransferase (EC 2.7.8.1) - soybean
gi|530088|gb|AAA67719.1| aminoalcoholphosphotransferase
Length = 389
Score = 142 bits (359), Expect(2) = 2e-36
Identities = 68/78 (87%), Positives = 74/78 (94%)
Frame = -3
Query: 499 GRMILAHVCDEPKGLKTGMCMSLMYLPFAIANALASRLNDGVPLVNERLVLLGYCAFTGT 320
GRMILAH+CDEPKGLKTGMCMSLM+LP AIAN LASRLNDGVPLV+ERLVLLGYCAF+ T
Sbjct: 301 GRMILAHLCDEPKGLKTGMCMSLMFLPLAIANVLASRLNDGVPLVDERLVLLGYCAFSVT 360
Query: 319 VYMHFATSVIHEITNAPG 266
+Y+HFATSVIHEITNA G
Sbjct: 361 LYLHFATSVIHEITNALG 378
Score = 31.2 bits (69), Expect(2) = 2e-36
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = -1
Query: 270 LGIYCFRITRKEA 232
LGIYCFRITRKEA
Sbjct: 377 LGIYCFRITRKEA 389
>gb|AAC79507.1| aminoalcoholphosphotransferase [Pimpinella brachycarpa]
Length = 389
Score = 133 bits (334), Expect(2) = 1e-33
Identities = 60/78 (76%), Positives = 69/78 (87%)
Frame = -3
Query: 499 GRMILAHVCDEPKGLKTGMCMSLMYLPFAIANALASRLNDGVPLVNERLVLLGYCAFTGT 320
GRM+LAH+CDEPKGLKT MC+SL+YLPFAIAN L +RLNDGVPLV E+ VLLGYC +TG
Sbjct: 301 GRMVLAHLCDEPKGLKTNMCLSLLYLPFAIANTLTARLNDGVPLVEEKWVLLGYCVYTGA 360
Query: 319 VYMHFATSVIHEITNAPG 266
+Y+HFATSVIHEIT A G
Sbjct: 361 LYLHFATSVIHEITTALG 378
Score = 31.2 bits (69), Expect(2) = 1e-33
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = -1
Query: 270 LGIYCFRITRKEA 232
LGIYCFRITRKEA
Sbjct: 377 LGIYCFRITRKEA 389
>pir||T14412 ethanolaminephosphotransferase homolog - turnip
gi|2072356|gb|AAB53764.1| aminoalcoholphosphotransferase
[Brassica rapa]
Length = 389
Score = 130 bits (327), Expect(2) = 8e-33
Identities = 61/78 (78%), Positives = 70/78 (89%)
Frame = -3
Query: 499 GRMILAHVCDEPKGLKTGMCMSLMYLPFAIANALASRLNDGVPLVNERLVLLGYCAFTGT 320
GRMILAH+CDEPKGLKT MC+SL+YLPFA+ANAL +RLNDGVPLV+E VLLGYC FT +
Sbjct: 301 GRMILAHLCDEPKGLKTNMCLSLVYLPFALANALTARLNDGVPLVDELWVLLGYCIFTVS 360
Query: 319 VYMHFATSVIHEITNAPG 266
+Y+HFATSVIHEIT A G
Sbjct: 361 LYLHFATSVIHEITTALG 378
Score = 31.2 bits (69), Expect(2) = 8e-33
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = -1
Query: 270 LGIYCFRITRKEA 232
LGIYCFRITRKEA
Sbjct: 377 LGIYCFRITRKEA 389
>ref|NP_189186.1| hypothetical protein; protein id: At3g25585.1, supported by cDNA:
gi_13430477, supported by cDNA: gi_15810001, supported
by cDNA: gi_3661594, supported by cDNA: gi_13430477,
supported by cDNA: gi_15810001, supported by cDNA:
gi_3661594 [Arabidopsis thaliana]
gi|3661595|gb|AAC61769.1| aminoalcoholphosphotransferase
[Arabidopsis thaliana]
gi|13430478|gb|AAK25861.1|AF360151_1 putative
aminoalcoholphosphotransferase [Arabidopsis thaliana]
gi|15810002|gb|AAL06928.1| AT3g25585/MWL2_21
[Arabidopsis thaliana] gi|23296820|gb|AAN13178.1|
putative aminoalcoholphosphotransferase [Arabidopsis
thaliana]
Length = 389
Score = 130 bits (326), Expect(2) = 1e-32
Identities = 62/78 (79%), Positives = 69/78 (87%)
Frame = -3
Query: 499 GRMILAHVCDEPKGLKTGMCMSLMYLPFAIANALASRLNDGVPLVNERLVLLGYCAFTGT 320
GRMILAH+CDEPKGLKT MCMSL+YLPFA+ANAL +RLNDGVPLV+E VLLGYC FT +
Sbjct: 301 GRMILAHLCDEPKGLKTNMCMSLLYLPFALANALTARLNDGVPLVDEFWVLLGYCIFTLS 360
Query: 319 VYMHFATSVIHEITNAPG 266
+Y HFATSVIHEIT A G
Sbjct: 361 LYAHFATSVIHEITTALG 378
Score = 31.2 bits (69), Expect(2) = 1e-32
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = -1
Query: 270 LGIYCFRITRKEA 232
LGIYCFRITRKEA
Sbjct: 377 LGIYCFRITRKEA 389
>ref|NP_172813.1| aminoalcoholphosphotransferase; protein id: At1g13560.1, supported
by cDNA: gi_19347829, supported by cDNA: gi_21280904,
supported by cDNA: gi_3661592 [Arabidopsis thaliana]
gi|25346060|pir||F86268 aminoalcoholphosphotransferase
[imported] - Arabidopsis thaliana
gi|3661593|gb|AAC61768.1| aminoalcoholphosphotransferase
[Arabidopsis thaliana]
gi|9802754|gb|AAF99823.1|AC027134_5
aminoalcoholphosphotransferase [Arabidopsis thaliana]
gi|19347830|gb|AAL86327.1| putative
aminoalcoholphosphotransferase [Arabidopsis thaliana]
gi|21280905|gb|AAM45110.1| putative
aminoalcoholphosphotransferase [Arabidopsis thaliana]
Length = 389
Score = 129 bits (323), Expect(2) = 2e-32
Identities = 61/78 (78%), Positives = 69/78 (88%)
Frame = -3
Query: 499 GRMILAHVCDEPKGLKTGMCMSLMYLPFAIANALASRLNDGVPLVNERLVLLGYCAFTGT 320
GRMILAH+CDEPKGLKT MCMSL+YLPFA+ANAL +RLN GVPLV+E VLLGYC FT +
Sbjct: 301 GRMILAHLCDEPKGLKTNMCMSLLYLPFALANALTARLNAGVPLVDELWVLLGYCIFTVS 360
Query: 319 VYMHFATSVIHEITNAPG 266
+Y+HFATSVIHEIT A G
Sbjct: 361 LYLHFATSVIHEITEALG 378
Score = 31.2 bits (69), Expect(2) = 2e-32
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = -1
Query: 270 LGIYCFRITRKEA 232
LGIYCFRITRKEA
Sbjct: 377 LGIYCFRITRKEA 389
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 400,054,914
Number of Sequences: 1393205
Number of extensions: 7921114
Number of successful extensions: 16538
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 16237
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16533
length of database: 448,689,247
effective HSP length: 114
effective length of database: 289,863,877
effective search space used: 15072921604
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
EST assemble image
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|
|
|
clone |
accession |
position |
1 |
MWM249e10_f |
AV768557 |
1 |
322 |
2 |
SPD092d08_f |
BP051341 |
27 |
503 |
|
Lotus japonicus
Kazusa DNA Research Institute