Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC016307A_C01 KMC016307A_c01
(590 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB63467.1| putative aspartate transaminase [Oryza sativa (j... 167 9e-41
ref|NP_178152.1| putative aspartate aminotransferase; protein id... 152 3e-36
gb|ZP_00105948.1| hypothetical protein [Nostoc punctiforme] 55 7e-07
gb|ZP_00107984.1| hypothetical protein [Nostoc punctiforme] 52 4e-06
ref|NP_488893.1| aspartate aminotransferase [Nostoc sp. PCC 7120... 52 6e-06
>dbj|BAB63467.1| putative aspartate transaminase [Oryza sativa (japonica
cultivar-group)]
Length = 394
Score = 167 bits (423), Expect = 9e-41
Identities = 79/113 (69%), Positives = 96/113 (84%)
Frame = -1
Query: 590 EMGPEWVRERVQTLAKNREIVSEALSPLGEGSVKGGEGAIYLFAKLPKGGYDDFDVVRWL 411
E GPEW+RERV+ L KNRE++ EA+SPLG+ SVKGGEGAIYL+AKLP+ DDF+VVRWL
Sbjct: 282 EAGPEWIRERVRDLVKNRELLMEAMSPLGKDSVKGGEGAIYLWAKLPEKCSDDFEVVRWL 341
Query: 410 ANRHGIAVIPGSACGAAGNLRISFGGLTESDCRAAAERLKKGLEELVANGLVQ 252
AN+HG+AVIPGSA G G +R+SFGGL ESD R AAERL++GL+ELV G+VQ
Sbjct: 342 ANKHGVAVIPGSASGGPGYIRVSFGGLKESDTRLAAERLRRGLQELVTEGMVQ 394
>ref|NP_178152.1| putative aspartate aminotransferase; protein id: At1g80360.1,
supported by cDNA: gi_20260519 [Arabidopsis thaliana]
gi|25406657|pir||C96835 hypothetical protein F5I6.11
[imported] - Arabidopsis thaliana
gi|12324981|gb|AAG52437.1|AC018848_8 putative aspartate
aminotransferase; 38163-36256 [Arabidopsis thaliana]
gi|20260520|gb|AAM13158.1| putative aspartate
aminotransferase [Arabidopsis thaliana]
Length = 394
Score = 152 bits (384), Expect = 3e-36
Identities = 73/113 (64%), Positives = 92/113 (80%)
Frame = -1
Query: 590 EMGPEWVRERVQTLAKNREIVSEALSPLGEGSVKGGEGAIYLFAKLPKGGYDDFDVVRWL 411
E G W+ ERV++L KNR+IV EAL PLG+ +VKGGEGAIYL+AKLP+G DDF VVRWL
Sbjct: 282 EEGSGWITERVKSLVKNRDIVKEALEPLGKENVKGGEGAIYLWAKLPEGHRDDFKVVRWL 341
Query: 410 ANRHGIAVIPGSACGAAGNLRISFGGLTESDCRAAAERLKKGLEELVANGLVQ 252
A+RHG+ VIPG A G+ G LR+SFGGL E + RAAA RL+KG+EEL+ +G+V+
Sbjct: 342 AHRHGVVVIPGCASGSPGYLRVSFGGLQEVEMRAAAARLRKGIEELLHHGMVE 394
>gb|ZP_00105948.1| hypothetical protein [Nostoc punctiforme]
Length = 388
Score = 55.1 bits (131), Expect = 7e-07
Identities = 34/106 (32%), Positives = 59/106 (55%), Gaps = 3/106 (2%)
Frame = -1
Query: 578 EWVRERVQTLAKNREIVSEALSPL-GEGSVKGGEGAIYLFAKLPKGGYDDFDVVRWLANR 402
E+++ + + + R++V ++L+ L G S+ GA Y F K+ D F++V+ L
Sbjct: 282 EYLQSNIGAIFQVRQLVLDSLNRLEGLCSITPANGAFYFFLKV-NTQMDAFELVKRLIQE 340
Query: 401 HGIAVIPGSACGAAGN--LRISFGGLTESDCRAAAERLKKGLEELV 270
H +AVIPG+ G LR+++G L + + ERL +GLE +V
Sbjct: 341 HKVAVIPGTTFGMDDGCYLRVAYGALQKETAKEGIERLVQGLETIV 386
>gb|ZP_00107984.1| hypothetical protein [Nostoc punctiforme]
Length = 388
Score = 52.4 bits (124), Expect = 4e-06
Identities = 28/78 (35%), Positives = 42/78 (52%)
Frame = -1
Query: 572 VRERVQTLAKNREIVSEALSPLGEGSVKGGEGAIYLFAKLPKGGYDDFDVVRWLANRHGI 393
V E Q AK R+++ + L+ + S +GA YLF + K G + L +H +
Sbjct: 289 VEEMRQAFAKRRQVMLDRLNAIPGLSTAKPDGAFYLFPDISKTGLKSLEFCDALLEKHQV 348
Query: 392 AVIPGSACGAAGNLRISF 339
AVIPG A GA N+R+S+
Sbjct: 349 AVIPGIAFGADDNIRLSY 366
>ref|NP_488893.1| aspartate aminotransferase [Nostoc sp. PCC 7120]
gi|25315788|pir||AE2412 aspartate aminotransferase
[imported] - Nostoc sp. (strain PCC 7120)
gi|17133990|dbj|BAB76552.1| aspartate aminotransferase
[Nostoc sp. PCC 7120]
Length = 388
Score = 52.0 bits (123), Expect = 6e-06
Identities = 29/84 (34%), Positives = 43/84 (50%)
Frame = -1
Query: 590 EMGPEWVRERVQTLAKNREIVSEALSPLGEGSVKGGEGAIYLFAKLPKGGYDDFDVVRWL 411
E + V E Q AK R+++ + L+ + S +GA YLF + K G + L
Sbjct: 283 EDSQDCVEEMRQAFAKRRQVMLDRLNAIPGLSTAKPDGAFYLFPDISKTGLKSLEFCDAL 342
Query: 410 ANRHGIAVIPGSACGAAGNLRISF 339
H +AVIPG A GA N+R+S+
Sbjct: 343 IEEHKVAVIPGIAFGADDNIRLSY 366
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 548,676,711
Number of Sequences: 1393205
Number of extensions: 12081229
Number of successful extensions: 35042
Number of sequences better than 10.0: 323
Number of HSP's better than 10.0 without gapping: 32984
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34860
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 22569056698
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
