Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC016296A_C01 KMC016296A_c01
(531 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T00774 hypothetical protein T22J18.13 - Arabidopsis thalian... 202 3e-51
ref|NP_683322.1| expressed protein; protein id: At1g22700.1, sup... 202 3e-51
ref|NP_564178.2| expressed protein; protein id: At1g22700.2, sup... 202 3e-51
gb|AAM93720.1| putative stress inducible protein [Oryza sativa (... 200 1e-50
gb|AAM61445.1| unknown [Arabidopsis thaliana] 193 1e-48
>pir||T00774 hypothetical protein T22J18.13 - Arabidopsis thaliana
gi|3287688|gb|AAC25516.1|AAC25516 Contains similarity to
ycf37 gene product gb|1001425 from Synechocystis sp.
genome gb|D63999. ESTs gb|T43026, gb|R64902, gb|Z18169
and gb|N37374 come from this gene. [Arabidopsis
thaliana]
Length = 299
Score = 202 bits (513), Expect = 3e-51
Identities = 96/131 (73%), Positives = 116/131 (88%)
Frame = -2
Query: 524 LFELGAVMLRRKFYPAATQYLLQAIEKWDGENQDLAQVHNALGVSYVRDGKLEKGIAQFE 345
LFELGAVMLRRKFYPAA ++L QAI+KWDG++QDLAQV+NALGVSYVR+ KL+KGIAQFE
Sbjct: 169 LFELGAVMLRRKFYPAANKFLQQAIQKWDGDDQDLAQVYNALGVSYVREDKLDKGIAQFE 228
Query: 344 TAVKIQPGYVTAWNHLGDAYESKKDYKSALKAFEEVLLFDPNNQIAQPRKDALKDLVQMY 165
AVK+QPGYVTAWN+LGDAYE KK+ AL AFEEVLLFDPNN++A+PR+DALKD V++Y
Sbjct: 229 MAVKLQPGYVTAWNNLGDAYEKKKELPLALNAFEEVLLFDPNNKVARPRRDALKDRVKLY 288
Query: 164 KGAPVKYNEKK 132
KG ++K+
Sbjct: 289 KGVVAVKSKKR 299
>ref|NP_683322.1| expressed protein; protein id: At1g22700.1, supported by cDNA:
120133. [Arabidopsis thaliana]
Length = 301
Score = 202 bits (513), Expect = 3e-51
Identities = 96/131 (73%), Positives = 116/131 (88%)
Frame = -2
Query: 524 LFELGAVMLRRKFYPAATQYLLQAIEKWDGENQDLAQVHNALGVSYVRDGKLEKGIAQFE 345
LFELGAVMLRRKFYPAA ++L QAI+KWDG++QDLAQV+NALGVSYVR+ KL+KGIAQFE
Sbjct: 171 LFELGAVMLRRKFYPAANKFLQQAIQKWDGDDQDLAQVYNALGVSYVREDKLDKGIAQFE 230
Query: 344 TAVKIQPGYVTAWNHLGDAYESKKDYKSALKAFEEVLLFDPNNQIAQPRKDALKDLVQMY 165
AVK+QPGYVTAWN+LGDAYE KK+ AL AFEEVLLFDPNN++A+PR+DALKD V++Y
Sbjct: 231 MAVKLQPGYVTAWNNLGDAYEKKKELPLALNAFEEVLLFDPNNKVARPRRDALKDRVKLY 290
Query: 164 KGAPVKYNEKK 132
KG ++K+
Sbjct: 291 KGVVAVKSKKR 301
>ref|NP_564178.2| expressed protein; protein id: At1g22700.2, supported by cDNA:
gi_15294175 [Arabidopsis thaliana]
gi|15294176|gb|AAK95265.1|AF410279_1 At1g22700/T22J18_13
[Arabidopsis thaliana] gi|24797054|gb|AAN64539.1|
At1g22700/T22J18_13 [Arabidopsis thaliana]
Length = 296
Score = 202 bits (513), Expect = 3e-51
Identities = 96/131 (73%), Positives = 116/131 (88%)
Frame = -2
Query: 524 LFELGAVMLRRKFYPAATQYLLQAIEKWDGENQDLAQVHNALGVSYVRDGKLEKGIAQFE 345
LFELGAVMLRRKFYPAA ++L QAI+KWDG++QDLAQV+NALGVSYVR+ KL+KGIAQFE
Sbjct: 166 LFELGAVMLRRKFYPAANKFLQQAIQKWDGDDQDLAQVYNALGVSYVREDKLDKGIAQFE 225
Query: 344 TAVKIQPGYVTAWNHLGDAYESKKDYKSALKAFEEVLLFDPNNQIAQPRKDALKDLVQMY 165
AVK+QPGYVTAWN+LGDAYE KK+ AL AFEEVLLFDPNN++A+PR+DALKD V++Y
Sbjct: 226 MAVKLQPGYVTAWNNLGDAYEKKKELPLALNAFEEVLLFDPNNKVARPRRDALKDRVKLY 285
Query: 164 KGAPVKYNEKK 132
KG ++K+
Sbjct: 286 KGVVAVKSKKR 296
>gb|AAM93720.1| putative stress inducible protein [Oryza sativa (japonica
cultivar-group)]
Length = 380
Score = 200 bits (508), Expect = 1e-50
Identities = 97/129 (75%), Positives = 110/129 (85%)
Frame = -2
Query: 521 FELGAVMLRRKFYPAATQYLLQAIEKWDGENQDLAQVHNALGVSYVRDGKLEKGIAQFET 342
FELGAVMLRRKFYPAA +YL QAI+KWD + QDLAQV+NALGVSY RD KL+K I QFE
Sbjct: 252 FELGAVMLRRKFYPAAIKYLQQAIQKWDRDEQDLAQVYNALGVSYKRDNKLDKSIQQFEK 311
Query: 341 AVKIQPGYVTAWNHLGDAYESKKDYKSALKAFEEVLLFDPNNQIAQPRKDALKDLVQMYK 162
AV++QPGYVTAWN+LGDAYE KKD KSALKAFEEVLLFDPNN +A+PR+D LK V MYK
Sbjct: 312 AVELQPGYVTAWNNLGDAYEQKKDLKSALKAFEEVLLFDPNNTVARPRRDDLKQRVGMYK 371
Query: 161 GAPVKYNEK 135
G PVK ++
Sbjct: 372 GVPVKSEKR 380
>gb|AAM61445.1| unknown [Arabidopsis thaliana]
Length = 300
Score = 193 bits (490), Expect = 1e-48
Identities = 94/131 (71%), Positives = 114/131 (86%)
Frame = -2
Query: 524 LFELGAVMLRRKFYPAATQYLLQAIEKWDGENQDLAQVHNALGVSYVRDGKLEKGIAQFE 345
LFELGAVMLR KFYPAA ++L QAI+KWDG++QDLAQV+NALGVSYVR+ KL+KGIAQFE
Sbjct: 171 LFELGAVMLR-KFYPAANKFLQQAIQKWDGDDQDLAQVYNALGVSYVREDKLDKGIAQFE 229
Query: 344 TAVKIQPGYVTAWNHLGDAYESKKDYKSALKAFEEVLLFDPNNQIAQPRKDALKDLVQMY 165
AVK+QPGYVTAWN+LGDAYE KK+ AL AFEEVLLFDPNN++A+P +DALKD V++Y
Sbjct: 230 MAVKLQPGYVTAWNNLGDAYEKKKELPLALNAFEEVLLFDPNNKVARPXRDALKDRVKLY 289
Query: 164 KGAPVKYNEKK 132
KG ++K+
Sbjct: 290 KGVVAVKSKKR 300
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 430,275,623
Number of Sequences: 1393205
Number of extensions: 8624307
Number of successful extensions: 29420
Number of sequences better than 10.0: 724
Number of HSP's better than 10.0 without gapping: 27129
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29291
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 17596710992
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
