Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC016245A_C01 KMC016245A_c01
(508 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAM67043.1| unknown [Arabidopsis thaliana] 74 7e-13
ref|NP_566445.1| Expressed protein; protein id: At3g13160.1, sup... 74 7e-13
dbj|BAB92593.1| B1070A12.17 [Oryza sativa (japonica cultivar-gro... 71 8e-12
gb|AAN05726.1| drought-inducible protein 1OS [Oryza sativa (indi... 71 8e-12
ref|NP_175985.1| unknown protein; protein id: At1g55890.1, suppo... 70 1e-11
>gb|AAM67043.1| unknown [Arabidopsis thaliana]
Length = 394
Score = 74.3 bits (181), Expect = 7e-13
Identities = 37/93 (39%), Positives = 60/93 (63%)
Frame = -3
Query: 500 LIESFCRDGKVEEAKYWYHEMVRCGCVAGPATYGALVPFLCKKGDFDLAFKLCKDAIGGR 321
+I+ F +GK++EA WY E+ + GC + +L+P +CK GD + A++LCK+ I +
Sbjct: 288 MIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKE-IFAK 346
Query: 320 SLLIGEGALKRVVEALVAEGRVGEAEKLVGLAR 222
LL+ E L+ VV+ALV + EAE++V LA+
Sbjct: 347 RLLVDEAVLQEVVDALVKGSKQDEAEEIVELAK 379
>ref|NP_566445.1| Expressed protein; protein id: At3g13160.1, supported by cDNA:
93242. [Arabidopsis thaliana]
gi|10172603|dbj|BAB01407.1| gene_id:MJG19.11~similar to
probable membrane-associated salt-inducible protein
[Arabidopsis thaliana] gi|22531265|gb|AAM97136.1|
expressed protein [Arabidopsis thaliana]
gi|27311983|gb|AAO00957.1| expressed protein
[Arabidopsis thaliana]
Length = 394
Score = 74.3 bits (181), Expect = 7e-13
Identities = 37/93 (39%), Positives = 60/93 (63%)
Frame = -3
Query: 500 LIESFCRDGKVEEAKYWYHEMVRCGCVAGPATYGALVPFLCKKGDFDLAFKLCKDAIGGR 321
+I+ F +GK++EA WY E+ + GC + +L+P +CK GD + A++LCK+ I +
Sbjct: 288 MIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKE-IFAK 346
Query: 320 SLLIGEGALKRVVEALVAEGRVGEAEKLVGLAR 222
LL+ E L+ VV+ALV + EAE++V LA+
Sbjct: 347 RLLVDEAVLQEVVDALVKGSKQDEAEEIVELAK 379
>dbj|BAB92593.1| B1070A12.17 [Oryza sativa (japonica cultivar-group)]
Length = 434
Score = 70.9 bits (172), Expect = 8e-12
Identities = 39/91 (42%), Positives = 54/91 (58%)
Frame = -3
Query: 500 LIESFCRDGKVEEAKYWYHEMVRCGCVAGPATYGALVPFLCKKGDFDLAFKLCKDAIGGR 321
LI +C+DG++EEAK + +M G VA TY L+P L K G+ D A K C + I G+
Sbjct: 310 LIRGYCKDGRLEEAKKLFEDMAENGYVANRGTYHTLIPCLVKAGELDYALKCCHE-IYGK 368
Query: 320 SLLIGEGALKRVVEALVAEGRVGEAEKLVGL 228
+L + L+ VV ALV RV +A K+V L
Sbjct: 369 NLRVDCFVLQEVVTALVTASRVEDATKIVEL 399
>gb|AAN05726.1| drought-inducible protein 1OS [Oryza sativa (indica
cultivar-group)]
Length = 201
Score = 70.9 bits (172), Expect = 8e-12
Identities = 39/91 (42%), Positives = 54/91 (58%)
Frame = -3
Query: 500 LIESFCRDGKVEEAKYWYHEMVRCGCVAGPATYGALVPFLCKKGDFDLAFKLCKDAIGGR 321
LI +C+DG++EEAK + +M G VA TY L+P L K G+ D A K C + I G+
Sbjct: 77 LIRGYCKDGRLEEAKKLFEDMAENGYVANRGTYHTLIPCLVKAGELDYALKCCHE-IYGK 135
Query: 320 SLLIGEGALKRVVEALVAEGRVGEAEKLVGL 228
+L + L+ VV ALV RV +A K+V L
Sbjct: 136 NLRVDCFVLQEVVTALVTASRVEDATKIVEL 166
>ref|NP_175985.1| unknown protein; protein id: At1g55890.1, supported by cDNA:
gi_18650653 [Arabidopsis thaliana]
gi|25406005|pir||B96600 protein F14J16.14 [imported] -
Arabidopsis thaliana gi|8778306|gb|AAF79315.1|AC002304_8
F14J16.14 [Arabidopsis thaliana]
gi|18650654|gb|AAL75896.1| At1g55890/F14J16_4
[Arabidopsis thaliana]
Length = 398
Score = 70.5 bits (171), Expect = 1e-11
Identities = 38/105 (36%), Positives = 64/105 (60%), Gaps = 1/105 (0%)
Frame = -3
Query: 500 LIESFCRDGKVEEAKYWYHEMVRCGCVAGPATYGALVPFLCKKGDFDLAFKLCKDAIGGR 321
+I +GK++EA+ WY E+V+ G AT+ L+P +CK GDF+ A +L K+ R
Sbjct: 291 MIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKR 350
Query: 320 SLLIGEGALKRVVEALVAEGRVGEAEKLVGLARKKN-LKIDLTTP 189
L+G+ L+++V+ LV + EAE++V +A+ + LK+ L P
Sbjct: 351 -YLVGQTTLQQLVDELVKGSKREEAEEIVKIAKTNDFLKLKLNLP 394
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 438,138,031
Number of Sequences: 1393205
Number of extensions: 8991098
Number of successful extensions: 33394
Number of sequences better than 10.0: 309
Number of HSP's better than 10.0 without gapping: 29191
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32941
length of database: 448,689,247
effective HSP length: 114
effective length of database: 289,863,877
effective search space used: 15652649358
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
