Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC016185A_C01 KMC016185A_c01
(516 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_173866.1| putative calmodulin; protein id: At1g24620.1 [A... 40 0.016
dbj|BAB86193.1| B1147A04.10 [Oryza sativa (japonica cultivar-gro... 39 0.035
ref|NP_197249.1| calmodulin-like protein; protein id: At5g17470.... 38 0.078
sp|Q9M7R0|ALL8_OLEEU Calcium-binding allergen Ole e 8 (PCA18/PCA... 37 0.13
gb|AAF31152.1|AF078680_1 calcium-binding protein [Olea europaea] 37 0.13
>ref|NP_173866.1| putative calmodulin; protein id: At1g24620.1 [Arabidopsis thaliana]
gi|25403253|pir||F86379 protein F21J9.28 [imported] -
Arabidopsis thaliana
gi|9743349|gb|AAF97973.1|AC000103_23 F21J9.28
[Arabidopsis thaliana]
Length = 186
Score = 40.0 bits (92), Expect = 0.016
Identities = 17/28 (60%), Positives = 22/28 (77%)
Frame = -3
Query: 514 MIKGVDKNGDGFVDFEEFRSMMKTGTHQ 431
MI GVDK+GDG +DFEEF+ MM G+ +
Sbjct: 150 MIGGVDKDGDGTIDFEEFKIMMTMGSRR 177
>dbj|BAB86193.1| B1147A04.10 [Oryza sativa (japonica cultivar-group)]
Length = 185
Score = 38.9 bits (89), Expect = 0.035
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = -3
Query: 514 MIKGVDKNGDGFVDFEEFRSMMKTG 440
MI+GVD+NGDG + FEEF+ MM G
Sbjct: 154 MIEGVDQNGDGLISFEEFKVMMAGG 178
>ref|NP_197249.1| calmodulin-like protein; protein id: At5g17470.1 [Arabidopsis
thaliana] gi|11276988|pir||T51473 calmodulin-like
protein - Arabidopsis thaliana
gi|9755771|emb|CAC01891.1| calmodulin-like protein
[Arabidopsis thaliana]
Length = 146
Score = 37.7 bits (86), Expect = 0.078
Identities = 15/29 (51%), Positives = 21/29 (71%)
Frame = -3
Query: 514 MIKGVDKNGDGFVDFEEFRSMMKTGTHQL 428
M++ VD +GDGFV FEEF++MM +L
Sbjct: 117 MVRAVDADGDGFVSFEEFKTMMSCNNKKL 145
>sp|Q9M7R0|ALL8_OLEEU Calcium-binding allergen Ole e 8 (PCA18/PCA23)
gi|6901652|gb|AAF31151.1|AF078679_1 calcium-binding
protein [Olea europaea]
Length = 171
Score = 37.0 bits (84), Expect = 0.13
Identities = 15/22 (68%), Positives = 18/22 (81%)
Frame = -3
Query: 514 MIKGVDKNGDGFVDFEEFRSMM 449
MIK VD +GDG+V FEEF+ MM
Sbjct: 136 MIKSVDSDGDGYVSFEEFKKMM 157
>gb|AAF31152.1|AF078680_1 calcium-binding protein [Olea europaea]
Length = 171
Score = 37.0 bits (84), Expect = 0.13
Identities = 15/22 (68%), Positives = 18/22 (81%)
Frame = -3
Query: 514 MIKGVDKNGDGFVDFEEFRSMM 449
MIK VD +GDG+V FEEF+ MM
Sbjct: 136 MIKSVDSDGDGYVSFEEFKKMM 157
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 412,659,804
Number of Sequences: 1393205
Number of extensions: 8131970
Number of successful extensions: 30813
Number of sequences better than 10.0: 168
Number of HSP's better than 10.0 without gapping: 29066
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30809
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 16154357632
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
