Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC016167A_C01 KMC016167A_c01
(781 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_190417.1| putative protein; protein id: At3g48480.1 [Arab... 104 2e-21
ref|NP_176228.1| hypothetical protein; protein id: At1g60220.1 [... 48 2e-04
pir||T02274 hypothetical protein T13D8.11 - Arabidopsis thaliana... 48 2e-04
ref|NP_065705.2| sentrin/SUMO-specific protease 7 [Homo sapiens]... 41 0.022
sp|Q9BQF6|SEN7_HUMAN Sentrin-specific protease 7 (Sentrin/SUMO-s... 39 0.065
>ref|NP_190417.1| putative protein; protein id: At3g48480.1 [Arabidopsis thaliana]
gi|7630035|emb|CAB88329.1| putative protein [Arabidopsis
thaliana]
Length = 169
Score = 104 bits (259), Expect = 2e-21
Identities = 45/86 (52%), Positives = 65/86 (75%)
Frame = -1
Query: 679 RFVVDIYKAWDRPETKNLIYQIPLLVPKVPQQRDGNECGNFVLYFINLFLRCAPENFSMG 500
RFV+DIY+A R E +L+ +IP VP VPQQ + ECG+FVLY+I+ F+ APENF++
Sbjct: 80 RFVLDIYRAEGRTEDSSLVDEIPFYVPMVPQQTNDVECGSFVLYYIHRFIEDAPENFNVE 139
Query: 499 GYPYFMKKDWFTFEDFDRFCERLYSL 422
PYF+K+DWF+ +D ++FC+ L+SL
Sbjct: 140 DMPYFLKEDWFSHKDLEKFCDELHSL 165
>ref|NP_176228.1| hypothetical protein; protein id: At1g60220.1 [Arabidopsis
thaliana]
Length = 604
Score = 47.8 bits (112), Expect = 2e-04
Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 11/102 (10%)
Frame = -1
Query: 739 MLLLDSLEMVNPRRLEPDIRRFVVDIYKAWDRPET-----------KNLIYQIPLLVPKV 593
+L LDSL + + + + +++RF+ D + ++ + KNL +I V +V
Sbjct: 477 ILHLDSLGLHSRKSIVENVKRFLKDEWNYLNQDDYSLDLPISEKVWKNLPRRISEAVVQV 536
Query: 592 PQQRDGNECGNFVLYFINLFLRCAPENFSMGGYPYFMKKDWF 467
PQQ++ +CG FVL+FI F+ AP+ F KK WF
Sbjct: 537 PQQKNDFDCGPFVLFFIKRFIEEAPQRLKRKDLGMFDKK-WF 577
>pir||T02274 hypothetical protein T13D8.11 - Arabidopsis thaliana
gi|3249071|gb|AAC24055.1| Contains similarity to
protein-tyrosine phosphatase 2 gb|L15420 from
Dictyostelium discoideum. EST gb|N38718 comes from this
g [Arabidopsis thaliana]
Length = 547
Score = 47.8 bits (112), Expect = 2e-04
Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 11/102 (10%)
Frame = -1
Query: 739 MLLLDSLEMVNPRRLEPDIRRFVVDIYKAWDRPET-----------KNLIYQIPLLVPKV 593
+L LDSL + + + + +++RF+ D + ++ + KNL +I V +V
Sbjct: 420 ILHLDSLGLHSRKSIVENVKRFLKDEWNYLNQDDYSLDLPISEKVWKNLPRRISEAVVQV 479
Query: 592 PQQRDGNECGNFVLYFINLFLRCAPENFSMGGYPYFMKKDWF 467
PQQ++ +CG FVL+FI F+ AP+ F KK WF
Sbjct: 480 PQQKNDFDCGPFVLFFIKRFIEEAPQRLKRKDLGMFDKK-WF 520
>ref|NP_065705.2| sentrin/SUMO-specific protease 7 [Homo sapiens]
gi|13276699|emb|CAB66534.1| hypothetical protein [Homo
sapiens]
Length = 984
Score = 40.8 bits (94), Expect = 0.022
Identities = 24/92 (26%), Positives = 49/92 (53%)
Frame = -1
Query: 742 CMLLLDSLEMVNPRRLEPDIRRFVVDIYKAWDRPETKNLIYQIPLLVPKVPQQRDGNECG 563
C+L+LDSL+ + R ++R ++ ++ + + + L PKVP+Q + ++CG
Sbjct: 868 CILILDSLKAASVRNTVQNLREYLEVEWEVKLKTHRQFSKTNMVDLCPKVPKQDNSSDCG 927
Query: 562 NFVLYFINLFLRCAPENFSMGGYPYFMKKDWF 467
++L ++ F + NF + P ++K WF
Sbjct: 928 VYLLQYVESFFKDPIVNFEL---PIHLEK-WF 955
>sp|Q9BQF6|SEN7_HUMAN Sentrin-specific protease 7 (Sentrin/SUMO-specific protease SENP7)
(SUMO-1 specific protease 2)
Length = 984
Score = 39.3 bits (90), Expect = 0.065
Identities = 23/92 (25%), Positives = 49/92 (53%)
Frame = -1
Query: 742 CMLLLDSLEMVNPRRLEPDIRRFVVDIYKAWDRPETKNLIYQIPLLVPKVPQQRDGNECG 563
C+L+LDSL+ + + ++R ++ ++ + + + L PKVP+Q + ++CG
Sbjct: 868 CILILDSLKAASVQNTVQNLREYLEVEWEVKLKTHRQFSKTNMVDLCPKVPKQDNSSDCG 927
Query: 562 NFVLYFINLFLRCAPENFSMGGYPYFMKKDWF 467
++L ++ F + NF + P ++K WF
Sbjct: 928 VYLLQYVESFFKDPIVNFEL---PIHLEK-WF 955
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 655,292,511
Number of Sequences: 1393205
Number of extensions: 14203514
Number of successful extensions: 27271
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 26399
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27256
length of database: 448,689,247
effective HSP length: 121
effective length of database: 280,111,442
effective search space used: 38655378996
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
