Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC016161A_C01 KMC016161A_c01
(790 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_180005.2| putative prolylcarboxypeptidase; protein id: At... 35 1.2
pir||G84634 probable prolylcarboxypeptidase [imported] - Arabido... 35 1.2
ref|NP_700602.1| hypothetical protein [Plasmodium falciparum 3D7... 34 2.1
dbj|BAC20747.1| putative alanine aminotransferase [Oryza sativa ... 27 5.3
gb|AAK25905.1|AF360195_1 putative alanine aminotransferase [Arab... 27 6.8
>ref|NP_180005.2| putative prolylcarboxypeptidase; protein id: At2g24280.1, supported
by cDNA: gi_16648800 [Arabidopsis thaliana]
gi|16648801|gb|AAL25591.1| At2g24280/F27D4.19
[Arabidopsis thaliana] gi|22655366|gb|AAM98275.1|
At2g24280/F27D4.19 [Arabidopsis thaliana]
Length = 494
Score = 35.0 bits (79), Expect = 1.2
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = -2
Query: 708 NLRFSTKKDPEWLKDLREQEVVI 640
+LR +TK DPEWLK+ R QEV I
Sbjct: 456 DLRAATKDDPEWLKEQRRQEVAI 478
>pir||G84634 probable prolylcarboxypeptidase [imported] - Arabidopsis thaliana
gi|20197495|gb|AAM15096.1| putative
prolylcarboxypeptidase [Arabidopsis thaliana]
Length = 476
Score = 35.0 bits (79), Expect = 1.2
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = -2
Query: 708 NLRFSTKKDPEWLKDLREQEVVI 640
+LR +TK DPEWLK+ R QEV I
Sbjct: 438 DLRAATKDDPEWLKEQRRQEVAI 460
>ref|NP_700602.1| hypothetical protein [Plasmodium falciparum 3D7]
gi|23494993|gb|AAN35326.1|AE014831_2 hypothetical protein
[Plasmodium falciparum 3D7]
Length = 1220
Score = 34.3 bits (77), Expect = 2.1
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Frame = +1
Query: 181 SKSIIGDPKLNEK-ETETKVSNNNQKKSINSNK*CSEE---L*MFRKKLK*RRPNSYLAY 348
+KS D K +EK + K +NNN N N S+E +F KK+K + +SY Y
Sbjct: 1074 NKSTNADNKKDEKNDPSVKHTNNNDSNDSNDNDYNSKEDDNFVLFLKKMKKKSEHSYFLY 1133
Query: 349 LNHISAY 369
LN + +
Sbjct: 1134 LNKLMEF 1140
>dbj|BAC20747.1| putative alanine aminotransferase [Oryza sativa (japonica
cultivar-group)]
Length = 480
Score = 26.9 bits (58), Expect(2) = 5.3
Identities = 11/16 (68%), Positives = 12/16 (74%)
Frame = -3
Query: 521 ISTCPGLGFGHKEMAH 474
IST PG GFG KE+ H
Sbjct: 429 ISTVPGSGFGQKEVFH 444
Score = 24.6 bits (52), Expect(2) = 5.3
Identities = 10/18 (55%), Positives = 13/18 (71%)
Frame = -2
Query: 582 AIEVGMAPNVFYCLKILK 529
A G A +VFYCLK+L+
Sbjct: 408 AKRAGKAADVFYCLKLLE 425
>gb|AAK25905.1|AF360195_1 putative alanine aminotransferase [Arabidopsis thaliana]
Length = 481
Score = 26.9 bits (58), Expect(2) = 6.8
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -2
Query: 582 AIEVGMAPNVFYCLKILK 529
A + G P+VFYCLK+L+
Sbjct: 405 AKQAGKVPDVFYCLKLLE 422
Score = 24.3 bits (51), Expect(2) = 6.8
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = -3
Query: 521 ISTCPGLGFGHKE 483
IST PG GFG KE
Sbjct: 426 ISTVPGSGFGQKE 438
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 633,804,864
Number of Sequences: 1393205
Number of extensions: 12917872
Number of successful extensions: 28278
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 26079
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28130
length of database: 448,689,247
effective HSP length: 121
effective length of database: 280,111,442
effective search space used: 39495713322
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
