Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC016106A_C01 KMC016106A_c01
(528 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_567962.1| putative aldehyde dehydrogenase; protein id: At... 117 8e-26
pir||T04770 aldehyde dehydrogenase (NAD+) homolog F10M10.10 - Ar... 117 8e-26
emb|CAC84903.1| aldehyde dehydrogenase [Arabidopsis thaliana] 116 2e-25
gb|AAM61211.1| aldehyde dehydrogenase, putative [Arabidopsis tha... 104 6e-22
ref|NP_175081.1| aldehyde dehydrogenase, putative; protein id: A... 104 6e-22
>ref|NP_567962.1| putative aldehyde dehydrogenase; protein id: At4g34240.1, supported
by cDNA: gi_15451105, supported by cDNA: gi_20148406
[Arabidopsis thaliana] gi|15451106|gb|AAK96824.1|
putative aldehyde dehydrogenase [Arabidopsis thaliana]
gi|20148407|gb|AAM10094.1| putative aldehyde
dehydrogenase [Arabidopsis thaliana]
Length = 550
Score = 117 bits (293), Expect = 8e-26
Identities = 52/80 (65%), Positives = 66/80 (82%)
Frame = -3
Query: 526 HVATRGLPFGGVEESGMGSYHGKFSFDSFSHKKSVLYRSFDADSSLRYPPYTPQKQKLLK 347
HV + LPFGGV ESG+G+YHGKFS+++FSHKK VLYRSF D+ LRYPPYTP+K+ +LK
Sbjct: 470 HVTVKDLPFGGVGESGIGAYHGKFSYETFSHKKGVLYRSFSGDADLRYPPYTPKKKMVLK 529
Query: 346 AIISRDIFAIFLALFGSSKE 287
A++S +IFA LA FG SK+
Sbjct: 530 ALLSSNIFAAILAFFGFSKD 549
>pir||T04770 aldehyde dehydrogenase (NAD+) homolog F10M10.10 - Arabidopsis
thaliana gi|4455169|emb|CAB36701.1| putative aldehyde
dehydrogenase [Arabidopsis thaliana]
gi|7270374|emb|CAB80141.1| putative aldehyde
dehydrogenase [Arabidopsis thaliana]
Length = 533
Score = 117 bits (293), Expect = 8e-26
Identities = 52/80 (65%), Positives = 66/80 (82%)
Frame = -3
Query: 526 HVATRGLPFGGVEESGMGSYHGKFSFDSFSHKKSVLYRSFDADSSLRYPPYTPQKQKLLK 347
HV + LPFGGV ESG+G+YHGKFS+++FSHKK VLYRSF D+ LRYPPYTP+K+ +LK
Sbjct: 453 HVTVKDLPFGGVGESGIGAYHGKFSYETFSHKKGVLYRSFSGDADLRYPPYTPKKKMVLK 512
Query: 346 AIISRDIFAIFLALFGSSKE 287
A++S +IFA LA FG SK+
Sbjct: 513 ALLSSNIFAAILAFFGFSKD 532
>emb|CAC84903.1| aldehyde dehydrogenase [Arabidopsis thaliana]
Length = 550
Score = 116 bits (290), Expect = 2e-25
Identities = 51/80 (63%), Positives = 66/80 (81%)
Frame = -3
Query: 526 HVATRGLPFGGVEESGMGSYHGKFSFDSFSHKKSVLYRSFDADSSLRYPPYTPQKQKLLK 347
HV + LPFGGV ESG+G+YHGKFS+++FSHKK VLYRSF D+ LRYPPYTP+K+ +LK
Sbjct: 470 HVTVKDLPFGGVGESGIGAYHGKFSYETFSHKKGVLYRSFSGDADLRYPPYTPKKKMVLK 529
Query: 346 AIISRDIFAIFLALFGSSKE 287
A++S ++FA LA FG SK+
Sbjct: 530 ALLSSNMFAAILAFFGFSKD 549
>gb|AAM61211.1| aldehyde dehydrogenase, putative [Arabidopsis thaliana]
Length = 484
Score = 104 bits (260), Expect = 6e-22
Identities = 48/76 (63%), Positives = 60/76 (78%)
Frame = -3
Query: 526 HVATRGLPFGGVEESGMGSYHGKFSFDSFSHKKSVLYRSFDADSSLRYPPYTPQKQKLLK 347
H+A LPFGGV ESGMG+YHGKFSFD+FSHKK+VLYRS DS++RYPPY+ K +LLK
Sbjct: 407 HLALHTLPFGGVGESGMGAYHGKFSFDAFSHKKAVLYRSLFGDSAVRYPPYSRGKLRLLK 466
Query: 346 AIISRDIFAIFLALFG 299
A++ +IF +F L G
Sbjct: 467 ALVDSNIFDLFKVLLG 482
>ref|NP_175081.1| aldehyde dehydrogenase, putative; protein id: At1g44170.1,
supported by cDNA: 1141., supported by cDNA: gi_18175878
[Arabidopsis thaliana] gi|25284174|pir||H96505 probable
aldehyde dehydrogenase [imported] - Arabidopsis thaliana
gi|12320819|gb|AAG50550.1|AC074228_5 aldehyde
dehydrogenase, putative [Arabidopsis thaliana]
gi|18175879|gb|AAL59944.1| putative aldehyde
dehydrogenase [Arabidopsis thaliana]
Length = 484
Score = 104 bits (260), Expect = 6e-22
Identities = 48/76 (63%), Positives = 60/76 (78%)
Frame = -3
Query: 526 HVATRGLPFGGVEESGMGSYHGKFSFDSFSHKKSVLYRSFDADSSLRYPPYTPQKQKLLK 347
H+A LPFGGV ESGMG+YHGKFSFD+FSHKK+VLYRS DS++RYPPY+ K +LLK
Sbjct: 407 HLALHTLPFGGVGESGMGAYHGKFSFDAFSHKKAVLYRSLFGDSAVRYPPYSRGKLRLLK 466
Query: 346 AIISRDIFAIFLALFG 299
A++ +IF +F L G
Sbjct: 467 ALVDSNIFDLFKVLLG 482
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 432,691,552
Number of Sequences: 1393205
Number of extensions: 8695405
Number of successful extensions: 22850
Number of sequences better than 10.0: 218
Number of HSP's better than 10.0 without gapping: 22147
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22825
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 17308240320
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
