Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC016048A_C01 KMC016048A_c01
(492 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_566858.1| expressed protein; protein id: At3g32930.1, sup... 210 8e-54
dbj|BAA19207.1| membrane guanylyl cyclase OLGC5 [Oryzias latipes] 32 2.9
dbj|BAA76302.1| guanylate cyclase OlGC-C [Oryzias latipes] 32 2.9
dbj|BAB23982.1| unnamed protein product [Mus musculus] 31 6.5
ref|XP_194625.1| praja1, RING-H2 motif containing [Mus musculus]... 31 6.5
>ref|NP_566858.1| expressed protein; protein id: At3g32930.1, supported by cDNA:
gi_15292708, supported by cDNA: gi_21281096 [Arabidopsis
thaliana] gi|9294365|dbj|BAB02262.1|
gene_id:T13O13.1~unknown protein [Arabidopsis thaliana]
gi|15292709|gb|AAK92723.1| unknown protein [Arabidopsis
thaliana] gi|21281097|gb|AAM45104.1| unknown protein
[Arabidopsis thaliana]
Length = 249
Score = 210 bits (534), Expect = 8e-54
Identities = 99/120 (82%), Positives = 108/120 (89%)
Frame = -1
Query: 492 EVANGGKFVSKWHPTTKGTLRRNYRVRSKSEGRRLLKAIASLLSDDDHFVDATSHKGCQI 313
+ A+ K VSKWHPTTKGTLRRNYR+ SK+EG RLLKAIASLLSDDDHF DATSHKGCQI
Sbjct: 130 DAADKRKLVSKWHPTTKGTLRRNYRIPSKAEGNRLLKAIASLLSDDDHFRDATSHKGCQI 189
Query: 312 RRESAHGESVCCNNVRALFDELPTPHLTVEITPFPAGPLTDKDYTKAEKLERVLRSSPSV 133
RRESAHG+SVCCNNVRALFDELPTPHL VEITPFPAGPLT+ DY KAEKLER+LRS ++
Sbjct: 190 RRESAHGQSVCCNNVRALFDELPTPHLVVEITPFPAGPLTENDYLKAEKLERILRSGANI 249
>dbj|BAA19207.1| membrane guanylyl cyclase OLGC5 [Oryzias latipes]
Length = 1151
Score = 32.3 bits (72), Expect = 2.9
Identities = 15/32 (46%), Positives = 20/32 (61%)
Frame = -1
Query: 459 WHPTTKGTLRRNYRVRSKSEGRRLLKAIASLL 364
WH TTK ++ R S SEG R LK +++LL
Sbjct: 20 WHSTTKMKRNKDTRTTSSSEGCRQLKTLSALL 51
>dbj|BAA76302.1| guanylate cyclase OlGC-C [Oryzias latipes]
Length = 1151
Score = 32.3 bits (72), Expect = 2.9
Identities = 15/32 (46%), Positives = 20/32 (61%)
Frame = -1
Query: 459 WHPTTKGTLRRNYRVRSKSEGRRLLKAIASLL 364
WH TTK ++ R S SEG R LK +++LL
Sbjct: 20 WHSTTKMKRNKDTRTTSSSEGCRQLKTLSALL 51
>dbj|BAB23982.1| unnamed protein product [Mus musculus]
Length = 578
Score = 31.2 bits (69), Expect = 6.5
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = +1
Query: 127 SSNRRTRSENPLKLLSFSVILISKRSSRKRCDFHSEMRSWELIEKSSHVIATHTFSMSTF 306
+S RRT +E P+ + + +S R R F S R W+ E S +A + S +
Sbjct: 8 ASQRRTTAEVPMHRST------ANQSKRSRSPFASTRRRWDDSESSGASLAVESEDYSRY 61
Query: 307 PP 312
PP
Sbjct: 62 PP 63
>ref|XP_194625.1| praja1, RING-H2 motif containing [Mus musculus]
gi|22902385|gb|AAH37616.1| Similar to praja1, RING-H2
motif containing [Mus musculus]
Length = 578
Score = 31.2 bits (69), Expect = 6.5
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = +1
Query: 127 SSNRRTRSENPLKLLSFSVILISKRSSRKRCDFHSEMRSWELIEKSSHVIATHTFSMSTF 306
+S RRT +E P+ + + +S R R F S R W+ E S +A + S +
Sbjct: 8 ASQRRTTAEVPMHRST------ANQSKRSRSPFASTRRRWDDSESSGASLAVESEDYSRY 61
Query: 307 PP 312
PP
Sbjct: 62 PP 63
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 394,587,588
Number of Sequences: 1393205
Number of extensions: 7996189
Number of successful extensions: 19381
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 19059
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19376
length of database: 448,689,247
effective HSP length: 114
effective length of database: 289,863,877
effective search space used: 14203329973
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
