Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC016040A_C01 KMC016040A_c01
(689 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||D96682 protein F1E22.18 [imported] - Arabidopsis thaliana g... 353 2e-96
ref|NP_176759.1| polyamine oxidase, putative; protein id: At1g65... 353 2e-96
gb|AAK43885.1|AF370508_1 putative protein kinase gb|AAD22129 [Ar... 352 4e-96
ref|NP_181830.1| putative amine oxidase; protein id: At2g43020.1... 328 6e-89
gb|AAL75899.1| At2g43020/MFL8.12 [Arabidopsis thaliana] 325 4e-88
>pir||D96682 protein F1E22.18 [imported] - Arabidopsis thaliana
gi|6686400|gb|AAF23834.1|AC007234_6 F1E22.18
[Arabidopsis thaliana]
Length = 516
Score = 353 bits (905), Expect = 2e-96
Identities = 163/230 (70%), Positives = 201/230 (86%), Gaps = 1/230 (0%)
Frame = +2
Query: 2 NSVLYDHDLESYMLFNIDGNQVPQQMVIEVGDTFKKILDETEKVRDEHPEDISVSQAISI 181
+S+LYDHDLESY LF++ GN++P Q+V +VGD FK+IL+ETEK+RDE D+SV Q ISI
Sbjct: 111 DSILYDHDLESYGLFDMHGNKIPPQLVTKVGDAFKRILEETEKIRDETANDMSVLQGISI 170
Query: 182 VLDRHPHLRQQGLAHQVLQWFICRMEAWFAADADMISLKTWDQEHVLTGGHGLMVQGYDP 361
VLDR+P LRQ+G+A++VLQW++CRMEAWFA DA++ISLK WDQ+ L+GGHGLMVQGY+P
Sbjct: 171 VLDRNPELRQEGMAYEVLQWYLCRMEAWFAVDANLISLKCWDQDECLSGGHGLMVQGYEP 230
Query: 362 VIKALAKDVDIRLNHRVTK-ISSGYNKVMVTVEDGRNFIADAAIITVPLGVLKANIIEFE 538
VI+ +AKD+DIRLNHRVTK + + NKV+V VE G NF+ADA IITVP+GVLKAN+I+FE
Sbjct: 231 VIRTIAKDLDIRLNHRVTKVVRTSNNKVIVAVEGGTNFVADAVIITVPIGVLKANLIQFE 290
Query: 539 PKLPDWKVSAISDLGVGNENKVALRFDKVFWPNVELLGVVAPTSYACGYF 688
P+LP WK SAIS LGVGNENK+ALRFD+ FWPNVE LG+VAPTSYACGYF
Sbjct: 291 PELPQWKTSAISGLGVGNENKIALRFDRAFWPNVEFLGMVAPTSYACGYF 340
>ref|NP_176759.1| polyamine oxidase, putative; protein id: At1g65840.1, supported by
cDNA: gi_13877614 [Arabidopsis thaliana]
gi|23198290|gb|AAN15672.1| putative protein kinase
gb|AAD22129 [Arabidopsis thaliana]
Length = 497
Score = 353 bits (905), Expect = 2e-96
Identities = 163/230 (70%), Positives = 201/230 (86%), Gaps = 1/230 (0%)
Frame = +2
Query: 2 NSVLYDHDLESYMLFNIDGNQVPQQMVIEVGDTFKKILDETEKVRDEHPEDISVSQAISI 181
+S+LYDHDLESY LF++ GN++P Q+V +VGD FK+IL+ETEK+RDE D+SV Q ISI
Sbjct: 111 DSILYDHDLESYGLFDMHGNKIPPQLVTKVGDAFKRILEETEKIRDETANDMSVLQGISI 170
Query: 182 VLDRHPHLRQQGLAHQVLQWFICRMEAWFAADADMISLKTWDQEHVLTGGHGLMVQGYDP 361
VLDR+P LRQ+G+A++VLQW++CRMEAWFA DA++ISLK WDQ+ L+GGHGLMVQGY+P
Sbjct: 171 VLDRNPELRQEGMAYEVLQWYLCRMEAWFAVDANLISLKCWDQDECLSGGHGLMVQGYEP 230
Query: 362 VIKALAKDVDIRLNHRVTK-ISSGYNKVMVTVEDGRNFIADAAIITVPLGVLKANIIEFE 538
VI+ +AKD+DIRLNHRVTK + + NKV+V VE G NF+ADA IITVP+GVLKAN+I+FE
Sbjct: 231 VIRTIAKDLDIRLNHRVTKVVRTSNNKVIVAVEGGTNFVADAVIITVPIGVLKANLIQFE 290
Query: 539 PKLPDWKVSAISDLGVGNENKVALRFDKVFWPNVELLGVVAPTSYACGYF 688
P+LP WK SAIS LGVGNENK+ALRFD+ FWPNVE LG+VAPTSYACGYF
Sbjct: 291 PELPQWKTSAISGLGVGNENKIALRFDRAFWPNVEFLGMVAPTSYACGYF 340
>gb|AAK43885.1|AF370508_1 putative protein kinase gb|AAD22129 [Arabidopsis thaliana]
Length = 497
Score = 352 bits (902), Expect = 4e-96
Identities = 162/230 (70%), Positives = 201/230 (86%), Gaps = 1/230 (0%)
Frame = +2
Query: 2 NSVLYDHDLESYMLFNIDGNQVPQQMVIEVGDTFKKILDETEKVRDEHPEDISVSQAISI 181
+S+LYDHDLESY LF++ GN++P Q+V +VGD FK+IL+ETEK+RDE D+SV Q ISI
Sbjct: 111 DSILYDHDLESYGLFDMHGNKIPPQLVTKVGDAFKRILEETEKIRDETANDMSVLQGISI 170
Query: 182 VLDRHPHLRQQGLAHQVLQWFICRMEAWFAADADMISLKTWDQEHVLTGGHGLMVQGYDP 361
VLDR+P LRQ+G+A++VLQW++CRMEAWFA DA++ISLK WDQ+ L+GGHGLMVQGY+P
Sbjct: 171 VLDRNPELRQEGMAYEVLQWYLCRMEAWFAVDANLISLKCWDQDECLSGGHGLMVQGYEP 230
Query: 362 VIKALAKDVDIRLNHRVTK-ISSGYNKVMVTVEDGRNFIADAAIITVPLGVLKANIIEFE 538
VI+ +AKD+DIRLNHRVTK + + NKV+V VE G NF+ADA IITVP+GVL+AN+I+FE
Sbjct: 231 VIRTIAKDLDIRLNHRVTKVVRTSNNKVIVAVEGGTNFVADAVIITVPIGVLRANLIQFE 290
Query: 539 PKLPDWKVSAISDLGVGNENKVALRFDKVFWPNVELLGVVAPTSYACGYF 688
P+LP WK SAIS LGVGNENK+ALRFD+ FWPNVE LG+VAPTSYACGYF
Sbjct: 291 PELPQWKTSAISGLGVGNENKIALRFDRAFWPNVEFLGMVAPTSYACGYF 340
>ref|NP_181830.1| putative amine oxidase; protein id: At2g43020.1, supported by cDNA:
gi_18650597 [Arabidopsis thaliana]
gi|25408829|pir||A84861 probable amine oxidase
[imported] - Arabidopsis thaliana
gi|4531444|gb|AAD22129.1| putative amine oxidase
[Arabidopsis thaliana]
Length = 490
Score = 328 bits (840), Expect = 6e-89
Identities = 155/229 (67%), Positives = 183/229 (79%)
Frame = +2
Query: 2 NSVLYDHDLESYMLFNIDGNQVPQQMVIEVGDTFKKILDETEKVRDEHPEDISVSQAISI 181
NSVLYDHDLESY LF++DGNQVPQ++V ++G TF++IL+E KVRDE DIS+SQA SI
Sbjct: 110 NSVLYDHDLESYALFDMDGNQVPQELVTQIGVTFERILEEINKVRDEQDADISISQAFSI 169
Query: 182 VLDRHPHLRQQGLAHQVLQWFICRMEAWFAADADMISLKTWDQEHVLTGGHGLMVQGYDP 361
V R P LR +GLAH VLQW++CRME WFAADA+ IS K WDQE +L GGHGLMV+GY P
Sbjct: 170 VFSRKPELRLEGLAHNVLQWYVCRMEGWFAADAETISAKCWDQEELLPGGHGLMVRGYRP 229
Query: 362 VIKALAKDVDIRLNHRVTKISSGYNKVMVTVEDGRNFIADAAIITVPLGVLKANIIEFEP 541
VI LAK +DIR+ HRVTKI YN V VT E+G+ F+ADAA+I VPLGVLK+ I+FEP
Sbjct: 230 VINTLAKGLDIRVGHRVTKIVRRYNGVKVTTENGQTFVADAAVIAVPLGVLKSGTIKFEP 289
Query: 542 KLPDWKVSAISDLGVGNENKVALRFDKVFWPNVELLGVVAPTSYACGYF 688
KLP+WK AI+DLGVG ENK+ L F+KVFWP VE LGVVA TSY C YF
Sbjct: 290 KLPEWKQEAINDLGVGIENKIILHFEKVFWPKVEFLGVVAETSYGCSYF 338
>gb|AAL75899.1| At2g43020/MFL8.12 [Arabidopsis thaliana]
Length = 490
Score = 325 bits (833), Expect = 4e-88
Identities = 154/229 (67%), Positives = 182/229 (79%)
Frame = +2
Query: 2 NSVLYDHDLESYMLFNIDGNQVPQQMVIEVGDTFKKILDETEKVRDEHPEDISVSQAISI 181
NSVLYDHDLESY LF++DGNQVPQ++V ++G TF++IL+E KVRDE DIS+SQA SI
Sbjct: 110 NSVLYDHDLESYALFDMDGNQVPQELVTQIGVTFERILEEINKVRDEQDADISISQAFSI 169
Query: 182 VLDRHPHLRQQGLAHQVLQWFICRMEAWFAADADMISLKTWDQEHVLTGGHGLMVQGYDP 361
V R P LR +GLAH VLQW++CRME WFAADA+ IS K WDQE +L GGHGLMV+GY P
Sbjct: 170 VFSRKPELRLEGLAHNVLQWYVCRMEGWFAADAETISAKCWDQEELLPGGHGLMVRGYRP 229
Query: 362 VIKALAKDVDIRLNHRVTKISSGYNKVMVTVEDGRNFIADAAIITVPLGVLKANIIEFEP 541
VI LAK +DIR+ HRVTKI YN V VT E+G+ F+ADAA+I VPLGVLK+ I+F P
Sbjct: 230 VINTLAKGLDIRVGHRVTKIVRRYNGVKVTTENGQTFVADAAVIAVPLGVLKSGTIKFGP 289
Query: 542 KLPDWKVSAISDLGVGNENKVALRFDKVFWPNVELLGVVAPTSYACGYF 688
KLP+WK AI+DLGVG ENK+ L F+KVFWP VE LGVVA TSY C YF
Sbjct: 290 KLPEWKQEAINDLGVGIENKIILHFEKVFWPKVEFLGVVAETSYGCSYF 338
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 615,511,864
Number of Sequences: 1393205
Number of extensions: 13669899
Number of successful extensions: 38016
Number of sequences better than 10.0: 149
Number of HSP's better than 10.0 without gapping: 36376
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37903
length of database: 448,689,247
effective HSP length: 119
effective length of database: 282,897,852
effective search space used: 31118763720
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
