Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC016016A_C01 KMC016016A_c01
(788 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB21610.2| mangrin [Bruguiera sexangula] 300 2e-80
emb|CAD38519.1| allene oxide cyclase [Oryza sativa (japonica cul... 285 7e-76
emb|CAB95731.1| allene oxide cyclase [Lycopersicon esculentum] g... 278 5e-74
pir||S57813 hypothetical protein (clone TPP15) - tomato (fragmen... 278 5e-74
gb|AAN37418.1| allene oxide cyclase [Solanum tuberosum] 275 5e-73
>dbj|BAB21610.2| mangrin [Bruguiera sexangula]
Length = 256
Score = 300 bits (767), Expect = 2e-80
Identities = 143/173 (82%), Positives = 159/173 (91%)
Frame = -3
Query: 777 KVQELSVYEINERDRGSPAYLRLSQKSVNSLGDLVPFSNKLYSGCLQKRVGITAGICVLI 598
KVQEL VYE+NERDRGSPA LRLSQK VNSLGDLVPFSNK+YSG LQKR+G+TAGIC+LI
Sbjct: 84 KVQELCVYEMNERDRGSPAVLRLSQKPVNSLGDLVPFSNKVYSGDLQKRIGVTAGICILI 143
Query: 597 ENKAEKKGDRYEAIYSFYFGDYGHISVQGPYLTYEESYLAVTGGSGIFEGVYGQVKLNQI 418
+NK EKKGDR+EAIYSFYFG YGHI+VQG YLTYE+++LAVTGGSGIFEGV GQVKL Q+
Sbjct: 144 QNKPEKKGDRFEAIYSFYFGGYGHIAVQGAYLTYEDTHLAVTGGSGIFEGVSGQVKLQQL 203
Query: 417 VFPFKLFYTFYLKGIKDLPQELLAKPVEPSPAVEPSPAAKACEPHAVVAGFTD 259
V+PFKLFYTFYL+GIKDLP+EL KPVEP P+VEP PAAKACEPHAVVA FTD
Sbjct: 204 VYPFKLFYTFYLRGIKDLPEELTKKPVEPHPSVEPMPAAKACEPHAVVANFTD 256
>emb|CAD38519.1| allene oxide cyclase [Oryza sativa (japonica cultivar-group)]
Length = 240
Score = 285 bits (728), Expect = 7e-76
Identities = 138/174 (79%), Positives = 153/174 (87%), Gaps = 1/174 (0%)
Frame = -3
Query: 777 KVQELSVYEINERDRGSPAYLRLSQKSV-NSLGDLVPFSNKLYSGCLQKRVGITAGICVL 601
KVQE+ VYEINERDR SPAYLRLS K N+LGDLVPF+NKLYSG L KR+GI+AGIC+L
Sbjct: 67 KVQEMFVYEINERDRESPAYLRLSAKQTENALGDLVPFTNKLYSGSLDKRLGISAGICIL 126
Query: 600 IENKAEKKGDRYEAIYSFYFGDYGHISVQGPYLTYEESYLAVTGGSGIFEGVYGQVKLNQ 421
I++ E+ GDRYEAIYSFYFGDYGHISVQGPYLTYEESYLAVTGGSG+FEG YGQVKLNQ
Sbjct: 127 IQHVPERNGDRYEAIYSFYFGDYGHISVQGPYLTYEESYLAVTGGSGVFEGAYGQVKLNQ 186
Query: 420 IVFPFKLFYTFYLKGIKDLPQELLAKPVEPSPAVEPSPAAKACEPHAVVAGFTD 259
IVFPFK+FYTFYLKGI DLP+ELL PV PSP VEP+PAAKA EPHA + FT+
Sbjct: 187 IVFPFKIFYTFYLKGIPDLPRELLCTPVPPSPTVEPTPAAKATEPHACLNNFTN 240
>emb|CAB95731.1| allene oxide cyclase [Lycopersicon esculentum]
gi|14423351|gb|AAK62358.1|AF384374_1 allene oxide cylase
[Lycopersicon esculentum]
Length = 244
Score = 278 bits (712), Expect = 5e-74
Identities = 133/175 (76%), Positives = 153/175 (87%)
Frame = -3
Query: 783 SVKVQELSVYEINERDRGSPAYLRLSQKSVNSLGDLVPFSNKLYSGCLQKRVGITAGICV 604
+ +VQELSVYEINERDRGSPAYLRLSQK+VNSLGDLVPFSNKLY+ L+KR+GITAG+C+
Sbjct: 70 NTEVQELSVYEINERDRGSPAYLRLSQKTVNSLGDLVPFSNKLYTADLKKRIGITAGLCI 129
Query: 603 LIENKAEKKGDRYEAIYSFYFGDYGHISVQGPYLTYEESYLAVTGGSGIFEGVYGQVKLN 424
LI+++ EKKGDRYEA+YSFYFGDYGHI+VQG YLTYEE+YLAVTGGSGIF GV GQVKL
Sbjct: 130 LIKHEEEKKGDRYEAVYSFYFGDYGHIAVQGAYLTYEETYLAVTGGSGIFAGVSGQVKLQ 189
Query: 423 QIVFPFKLFYTFYLKGIKDLPQELLAKPVEPSPAVEPSPAAKACEPHAVVAGFTD 259
Q++FPFKLFYTFYLKGI LP ELL V PSP VEP+P AKACE A + +T+
Sbjct: 190 QLIFPFKLFYTFYLKGIPGLPSELLCTAVPPSPTVEPTPEAKACEEGAALKNYTN 244
>pir||S57813 hypothetical protein (clone TPP15) - tomato (fragment)
gi|924632|gb|AAA80500.1| unknown
Length = 214
Score = 278 bits (712), Expect = 5e-74
Identities = 133/175 (76%), Positives = 153/175 (87%)
Frame = -3
Query: 783 SVKVQELSVYEINERDRGSPAYLRLSQKSVNSLGDLVPFSNKLYSGCLQKRVGITAGICV 604
+ +VQELSVYEINERDRGSPAYLRLSQK+VNSLGDLVPFSNKLY+ L+KR+GITAG+C+
Sbjct: 40 NTEVQELSVYEINERDRGSPAYLRLSQKTVNSLGDLVPFSNKLYTADLKKRIGITAGLCI 99
Query: 603 LIENKAEKKGDRYEAIYSFYFGDYGHISVQGPYLTYEESYLAVTGGSGIFEGVYGQVKLN 424
LI+++ EKKGDRYEA+YSFYFGDYGHI+VQG YLTYEE+YLAVTGGSGIF GV GQVKL
Sbjct: 100 LIKHEEEKKGDRYEAVYSFYFGDYGHIAVQGAYLTYEETYLAVTGGSGIFAGVSGQVKLQ 159
Query: 423 QIVFPFKLFYTFYLKGIKDLPQELLAKPVEPSPAVEPSPAAKACEPHAVVAGFTD 259
Q++FPFKLFYTFYLKGI LP ELL V PSP VEP+P AKACE A + +T+
Sbjct: 160 QLIFPFKLFYTFYLKGIPGLPSELLCTAVPPSPTVEPTPEAKACEEGAALKNYTN 214
>gb|AAN37418.1| allene oxide cyclase [Solanum tuberosum]
Length = 246
Score = 275 bits (703), Expect = 5e-73
Identities = 131/173 (75%), Positives = 151/173 (86%)
Frame = -3
Query: 783 SVKVQELSVYEINERDRGSPAYLRLSQKSVNSLGDLVPFSNKLYSGCLQKRVGITAGICV 604
+ +VQELSVYE+NERDRGSPAYLRLSQK+VNSLGDLVPFSNKLY+ L+KR+GITAG+C+
Sbjct: 74 NTEVQELSVYELNERDRGSPAYLRLSQKNVNSLGDLVPFSNKLYTADLKKRIGITAGLCI 133
Query: 603 LIENKAEKKGDRYEAIYSFYFGDYGHISVQGPYLTYEESYLAVTGGSGIFEGVYGQVKLN 424
LI+++ EKKGDRYEA+YSFYFGDYG I+VQG YLTYE+SYLAVTGGSGIF GV GQVKL
Sbjct: 134 LIKHEEEKKGDRYEAVYSFYFGDYGQIAVQGSYLTYEDSYLAVTGGSGIFAGVSGQVKLQ 193
Query: 423 QIVFPFKLFYTFYLKGIKDLPQELLAKPVEPSPAVEPSPAAKACEPHAVVAGF 265
Q++FPFKLFYTFYLKGI DLP ELL V PSP VEP+P AKACE A + +
Sbjct: 194 QLIFPFKLFYTFYLKGIPDLPSELLCTAVPPSPTVEPTPEAKACEDGAALKNY 246
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 673,112,149
Number of Sequences: 1393205
Number of extensions: 15208572
Number of successful extensions: 46584
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 42343
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46297
length of database: 448,689,247
effective HSP length: 121
effective length of database: 280,111,442
effective search space used: 39495713322
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
