Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC015960A_C01 KMC015960A_c01
(475 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_195118.1| putative protein; protein id: At4g33920.1, supp... 149 2e-35
gb|AAK63942.1|AC084282_23 putative protein phosphatase [Oryza sa... 137 4e-32
gb|AAL79731.1|AC091774_22 putative protein phosphatase [Oryza sa... 123 9e-28
ref|NP_187868.1| protein phosphatase 2C, putative; protein id: A... 122 2e-27
dbj|BAB02253.1| protein phosphatase 2C [Arabidopsis thaliana] gi... 122 2e-27
>ref|NP_195118.1| putative protein; protein id: At4g33920.1, supported by cDNA:
40123., supported by cDNA: gi_13937197, supported by
cDNA: gi_19548014 [Arabidopsis thaliana]
gi|7485610|pir||T05220 hypothetical protein F17I5.110 -
Arabidopsis thaliana gi|3297816|emb|CAA19874.1| putative
protein [Arabidopsis thaliana]
gi|7270341|emb|CAB80109.1| putative protein [Arabidopsis
thaliana] gi|13937198|gb|AAK50092.1|AF372953_1
AT4g33920/F17I5_110 [Arabidopsis thaliana]
gi|19548015|gb|AAL87371.1| AT4g33920/F17I5_110
[Arabidopsis thaliana] gi|21593561|gb|AAM65528.1|
putative protein phosphatase [Arabidopsis thaliana]
Length = 380
Score = 149 bits (375), Expect = 2e-35
Identities = 79/125 (63%), Positives = 98/125 (78%), Gaps = 2/125 (1%)
Frame = -1
Query: 475 PSILKRKLKVEDLFLIFASDGLWDHLTDEAAVEIISRSPRTGIAKRLVRAALEEAAKKNG 296
PSI+ RKLK +DLFLIFASDGLW+HL+DE AVEI+ + PRTGIA+RLVRAALEEAAKK
Sbjct: 251 PSIIVRKLKPQDLFLIFASDGLWEHLSDETAVEIVLKHPRTGIARRLVRAALEEAAKKRE 310
Query: 295 KRYEDLKRIEKGVRRLFHDDITVIVLYLDNSLGSLNSSR--HQGVYRCIDTPVDIFSLRA 122
RY D+K+I KG+RR FHDDI+VIV+YLD + S ++S+ QG I P DI+SL +
Sbjct: 311 MRYGDIKKIAKGIRRHFHDDISVIVVYLDQNKTSSSNSKLVKQG---GITAPPDIYSLHS 367
Query: 121 DEANR 107
DEA +
Sbjct: 368 DEAEQ 372
>gb|AAK63942.1|AC084282_23 putative protein phosphatase [Oryza sativa (japonica
cultivar-group)]
Length = 380
Score = 137 bits (346), Expect = 4e-32
Identities = 69/121 (57%), Positives = 89/121 (73%)
Frame = -1
Query: 475 PSILKRKLKVEDLFLIFASDGLWDHLTDEAAVEIISRSPRTGIAKRLVRAALEEAAKKNG 296
PSI RKLK DLFLIFASDGLW+HL+D+AAV+I+ ++PRTGIA RLV+AAL+EA +K
Sbjct: 248 PSIQVRKLKPNDLFLIFASDGLWEHLSDDAAVQIVFKNPRTGIANRLVKAALKEATRKRE 307
Query: 295 KRYEDLKRIEKGVRRLFHDDITVIVLYLDNSLGSLNSSRHQGVYRCIDTPVDIFSLRADE 116
+ DLK IEKGVRR FHDDI+VIV+YLD G ++ C + PVDI+S + +
Sbjct: 308 VSFRDLKTIEKGVRRHFHDDISVIVVYLDRHRGRRHTRVVDSSSNCTNAPVDIYSSNSGQ 367
Query: 115 A 113
+
Sbjct: 368 S 368
>gb|AAL79731.1|AC091774_22 putative protein phosphatase [Oryza sativa]
Length = 392
Score = 123 bits (309), Expect = 9e-28
Identities = 61/98 (62%), Positives = 79/98 (80%)
Frame = -1
Query: 475 PSILKRKLKVEDLFLIFASDGLWDHLTDEAAVEIISRSPRTGIAKRLVRAALEEAAKKNG 296
PSI + L+ D FLIFASDGLW+HLT++ AV+I+ SPR G A+RL++AAL+EAAKK
Sbjct: 268 PSISVQPLQPHDQFLIFASDGLWEHLTNQEAVDIVHSSPRNGSARRLIKAALQEAAKKRE 327
Query: 295 KRYEDLKRIEKGVRRLFHDDITVIVLYLDNSLGSLNSS 182
RY DLK+I++GVRR FHDDITVIV++LD+SL S S+
Sbjct: 328 MRYSDLKKIDRGVRRHFHDDITVIVVFLDSSLVSRAST 365
>ref|NP_187868.1| protein phosphatase 2C, putative; protein id: At3g12620.1
[Arabidopsis thaliana]
gi|12321955|gb|AAG51012.1|AC069474_11 protein
phosphatase 2C, putative; 16828-18284 [Arabidopsis
thaliana]
Length = 376
Score = 122 bits (306), Expect = 2e-27
Identities = 58/99 (58%), Positives = 79/99 (79%)
Frame = -1
Query: 475 PSILKRKLKVEDLFLIFASDGLWDHLTDEAAVEIISRSPRTGIAKRLVRAALEEAAKKNG 296
P+I K+ ED FLIFASDGLW+HL+++ AV+I++ PR GIA++L++ AL EAAKK
Sbjct: 261 PAITVHKIHPEDQFLIFASDGLWEHLSNQEAVDIVNTCPRNGIARKLIKTALREAAKKRE 320
Query: 295 KRYEDLKRIEKGVRRLFHDDITVIVLYLDNSLGSLNSSR 179
RY DLK+I++GVRR FHDDITVIV++LD+ L S ++SR
Sbjct: 321 MRYSDLKKIDRGVRRHFHDDITVIVVFLDSHLVSRSTSR 359
>dbj|BAB02253.1| protein phosphatase 2C [Arabidopsis thaliana]
gi|28466963|gb|AAO44090.1| At3g12620 [Arabidopsis
thaliana]
Length = 385
Score = 122 bits (306), Expect = 2e-27
Identities = 58/99 (58%), Positives = 79/99 (79%)
Frame = -1
Query: 475 PSILKRKLKVEDLFLIFASDGLWDHLTDEAAVEIISRSPRTGIAKRLVRAALEEAAKKNG 296
P+I K+ ED FLIFASDGLW+HL+++ AV+I++ PR GIA++L++ AL EAAKK
Sbjct: 270 PAITVHKIHPEDQFLIFASDGLWEHLSNQEAVDIVNTCPRNGIARKLIKTALREAAKKRE 329
Query: 295 KRYEDLKRIEKGVRRLFHDDITVIVLYLDNSLGSLNSSR 179
RY DLK+I++GVRR FHDDITVIV++LD+ L S ++SR
Sbjct: 330 MRYSDLKKIDRGVRRHFHDDITVIVVFLDSHLVSRSTSR 368
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 372,198,739
Number of Sequences: 1393205
Number of extensions: 7217943
Number of successful extensions: 22724
Number of sequences better than 10.0: 246
Number of HSP's better than 10.0 without gapping: 22154
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22702
length of database: 448,689,247
effective HSP length: 113
effective length of database: 291,257,082
effective search space used: 12815311608
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
