Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC015912A_C01 KMC015912A_c01
(828 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_188674.1| translational inhibitor protein, putative; prot... 231 7e-60
dbj|BAC20708.1| putative translational inhibitor protein [Oryza ... 222 5e-57
dbj|BAB02821.1| contains similarity to protein translation inhib... 222 6e-57
ref|NP_005827.1| translational inhibitor protein p14.5 [Homo sap... 144 2e-33
ref|NP_741177.1| YjgF family precursor [Caenorhabditis elegans] ... 141 1e-32
>ref|NP_188674.1| translational inhibitor protein, putative; protein id: At3g20390.1,
supported by cDNA: 20767., supported by cDNA:
gi_14030710, supported by cDNA: gi_16974536 [Arabidopsis
thaliana] gi|14030711|gb|AAK53030.1|AF375446_1
AT3g20390/MQC12_15 [Arabidopsis thaliana]
gi|16974537|gb|AAL31178.1| AT3g20390/MQC12_15
[Arabidopsis thaliana] gi|21554167|gb|AAM63246.1|
translational inhibitor protein, putative [Arabidopsis
thaliana]
Length = 187
Score = 231 bits (590), Expect = 7e-60
Identities = 124/187 (66%), Positives = 147/187 (78%), Gaps = 4/187 (2%)
Frame = -2
Query: 809 WSAAKSFHVPA-NVGVLRRGASW---AAGIAGVSVAGTAMWRSSSSKRSSPFACLSLSTD 642
WS +S + P ++ R AAG+ + AG +++R SS RS PFA LS+S
Sbjct: 3 WSVFRSINTPTLDLSTALRSTRTPLVAAGVGCATFAGVSLFRMSS--RSPPFASLSVSAS 60
Query: 641 TRTKEAVQTEKAPAALGPYSQAIKANNLLFVSGVLGLDPETGKFISDNVEDQTEQILKNM 462
+ KE V TEKAPAALGPYSQAIKANNL+F+SGVLGL PETGKF+S++VEDQTEQ+LKNM
Sbjct: 61 SVKKEVVSTEKAPAALGPYSQAIKANNLVFLSGVLGLIPETGKFVSESVEDQTEQVLKNM 120
Query: 461 GEILKSGGASYTSVVKTTILLADLKDFKKVNEIYAKYFTSPAPARSTYQVAALPLDAKIE 282
GEILK+ GA Y+SVVKTTI+LADL DFK VNEIYAKYF +P+PARSTYQVAALPL+AKIE
Sbjct: 121 GEILKASGADYSSVVKTTIMLADLADFKTVNEIYAKYFPAPSPARSTYQVAALPLNAKIE 180
Query: 281 IECIAAL 261
IECIA L
Sbjct: 181 IECIATL 187
>dbj|BAC20708.1| putative translational inhibitor protein [Oryza sativa (japonica
cultivar-group)]
Length = 180
Score = 222 bits (566), Expect = 5e-57
Identities = 117/161 (72%), Positives = 136/161 (83%)
Frame = -2
Query: 743 AAGIAGVSVAGTAMWRSSSSKRSSPFACLSLSTDTRTKEAVQTEKAPAALGPYSQAIKAN 564
AAG+ S A T R + S A LS + KEAVQTEKAPAALGPYSQAIKAN
Sbjct: 26 AAGLGRASFAVTGRLRRAVS------ASLSTAAAAVKKEAVQTEKAPAALGPYSQAIKAN 79
Query: 563 NLLFVSGVLGLDPETGKFISDNVEDQTEQILKNMGEILKSGGASYTSVVKTTILLADLKD 384
N++FVSGVLGL+PETGKF+S++VE+QTEQ++KNMGEILK+ GASY+SVVKTTI+LADL+D
Sbjct: 80 NMVFVSGVLGLNPETGKFVSESVEEQTEQVMKNMGEILKASGASYSSVVKTTIMLADLQD 139
Query: 383 FKKVNEIYAKYFTSPAPARSTYQVAALPLDAKIEIECIAAL 261
FKKVNEIYAKYF +PAPARSTYQVAALPL+A+IEIECIAAL
Sbjct: 140 FKKVNEIYAKYFPAPAPARSTYQVAALPLNARIEIECIAAL 180
>dbj|BAB02821.1| contains similarity to protein translation
inhibitor~gene_id:MQC12.17 [Arabidopsis thaliana]
Length = 143
Score = 222 bits (565), Expect = 6e-57
Identities = 112/142 (78%), Positives = 126/142 (87%)
Frame = -2
Query: 686 SKRSSPFACLSLSTDTRTKEAVQTEKAPAALGPYSQAIKANNLLFVSGVLGLDPETGKFI 507
S RS PFA LS+S + KE V TEKAPAALGPYSQAIKANNL+F+SGVLGL PETGKF+
Sbjct: 2 SSRSPPFASLSVSASSVKKEVVSTEKAPAALGPYSQAIKANNLVFLSGVLGLIPETGKFV 61
Query: 506 SDNVEDQTEQILKNMGEILKSGGASYTSVVKTTILLADLKDFKKVNEIYAKYFTSPAPAR 327
S++VEDQTEQ+LKNMGEILK+ GA Y+SVVKTTI+LADL DFK VNEIYAKYF +P+PAR
Sbjct: 62 SESVEDQTEQVLKNMGEILKASGADYSSVVKTTIMLADLADFKTVNEIYAKYFPAPSPAR 121
Query: 326 STYQVAALPLDAKIEIECIAAL 261
STYQVAALPL+AKIEIECIA L
Sbjct: 122 STYQVAALPLNAKIEIECIATL 143
>ref|NP_005827.1| translational inhibitor protein p14.5 [Homo sapiens]
gi|1717975|sp|P52758|UK14_HUMAN 14.5 kDa translational
inhibitor protein (p14.5) (UK114 antigen homolog)
gi|1177435|emb|CAA64670.1| 14.5 kDa translational
inhibitor protein, p14.5 [Homo sapiens]
gi|12751539|gb|AAK01939.1| perchloric-acid-soluble
translational inhibitor p14.5 [Homo sapiens]
gi|15214909|gb|AAH12592.1|AAH12592 Similar to
translational inhibitor protein p14.5 [Homo sapiens]
gi|16307463|gb|AAH10280.1|AAH10280 translational
inhibitor protein p14.5 [Homo sapiens]
Length = 137
Score = 144 bits (362), Expect = 2e-33
Identities = 65/122 (53%), Positives = 91/122 (74%)
Frame = -2
Query: 632 KEAVQTEKAPAALGPYSQAIKANNLLFVSGVLGLDPETGKFISDNVEDQTEQILKNMGEI 453
+ + T KAP A+GPYSQA+ + +++SG +G+DP +G+ +S V ++ +Q LKNMGEI
Sbjct: 6 RRVISTAKAPGAIGPYSQAVLVDRTIYISGQIGMDPSSGQLVSGGVAEEAKQALKNMGEI 65
Query: 452 LKSGGASYTSVVKTTILLADLKDFKKVNEIYAKYFTSPAPARSTYQVAALPLDAKIEIEC 273
LK+ G +T+VVKTT+LLAD+ DF VNEIY +YF S PAR+ YQVAALP ++IEIE
Sbjct: 66 LKAAGCDFTNVVKTTVLLADINDFNTVNEIYKQYFKSNFPARAAYQVAALPKGSRIEIEA 125
Query: 272 IA 267
+A
Sbjct: 126 VA 127
>ref|NP_741177.1| YjgF family precursor [Caenorhabditis elegans]
gi|1353163|sp|Q10121|YSD2_CAEEL Hypothetical protein
C23G10.2 in chromosome III precursor
gi|7496338|pir||T15580 hypothetical protein C23G10.2 -
Caenorhabditis elegans gi|9802867|gb|AAF99878.1|
Hypothetical protein C23G10.2a [Caenorhabditis elegans]
Length = 185
Score = 141 bits (356), Expect = 1e-32
Identities = 66/123 (53%), Positives = 92/123 (74%)
Frame = -2
Query: 635 TKEAVQTEKAPAALGPYSQAIKANNLLFVSGVLGLDPETGKFISDNVEDQTEQILKNMGE 456
T++ + + AP A+GPYSQA++A N +++SG LGLDP+TG + + V +QT Q LKN+GE
Sbjct: 54 TRQIISSANAPGAIGPYSQAVRAGNTIYLSGSLGLDPKTGD-LKEGVVEQTHQSLKNLGE 112
Query: 455 ILKSGGASYTSVVKTTILLADLKDFKKVNEIYAKYFTSPAPARSTYQVAALPLDAKIEIE 276
+LK+ GA Y +VVKTT+LL ++ DF VNE+Y +YF SP PAR+ YQVAALP +EIE
Sbjct: 113 VLKAAGADYGNVVKTTVLLQNIADFAAVNEVYGQYFKSPYPARAAYQVAALPKGGLVEIE 172
Query: 275 CIA 267
+A
Sbjct: 173 AVA 175
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 707,525,999
Number of Sequences: 1393205
Number of extensions: 15257894
Number of successful extensions: 45745
Number of sequences better than 10.0: 341
Number of HSP's better than 10.0 without gapping: 43002
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45562
length of database: 448,689,247
effective HSP length: 122
effective length of database: 278,718,237
effective search space used: 42643890261
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
