Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC015883A_C01 KMC015883A_c01
(536 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P35493|PMGI_RICCO 2,3-bisphosphoglycerate-independent phospho... 267 5e-71
sp|Q42908|PMGI_MESCR 2,3-bisphosphoglycerate-independent phospho... 263 8e-70
emb|CAA06215.1| apgm [Malus x domestica] 261 5e-69
sp|O24246|PMGI_PRUDU 2,3-bisphosphoglycerate-independent phospho... 257 5e-68
gb|AAD24857.1|AF047842_1 phosphoglycerate mutase [Solanum tubero... 257 7e-68
>sp|P35493|PMGI_RICCO 2,3-bisphosphoglycerate-independent phosphoglycerate mutase
(Phosphoglyceromutase) (BPG-independent PGAM) (PGAM-I)
gi|1076562|pir||S49647 phosphoglycerate mutase (EC
5.4.2.1), 2, 3-bisphosphoglycerate-independent - castor
bean gi|474170|emb|CAA49995.1| phosphoglycerate mutase
[Ricinus communis]
Length = 556
Score = 267 bits (683), Expect = 5e-71
Identities = 128/147 (87%), Positives = 138/147 (93%)
Frame = -2
Query: 535 AILSRKFDQVRVNLPNSDMVGHTGDIEATIVGCKAADDAVKMILDAIEQVDGIYVVTADH 356
AILS KF QVRVN+PN DMVGHTGD+EAT+VGCKAAD+AVKMI+DAIEQV GIYVVTADH
Sbjct: 410 AILSGKFQQVRVNIPNGDMVGHTGDVEATVVGCKAADEAVKMIIDAIEQVGGIYVVTADH 469
Query: 355 GNAEDMVKRDKSGKPLLDKDGKIQILSSHTLQPVPIAIGGPGLSPGVRFRDDLPNGGLAN 176
GNAEDMVKRDKSGKP+ DK GKIQIL+SHTLQPVPIAIGGPGL+PGVRFR D+P GGLAN
Sbjct: 470 GNAEDMVKRDKSGKPMADKSGKIQILTSHTLQPVPIAIGGPGLTPGVRFRSDIPTGGLAN 529
Query: 175 VAATVMNLHGFEAPSDYEPTLVEVVDN 95
VAATVMNLHGFEAPSDYEPTL+E VDN
Sbjct: 530 VAATVMNLHGFEAPSDYEPTLIEAVDN 556
>sp|Q42908|PMGI_MESCR 2,3-bisphosphoglycerate-independent phosphoglycerate mutase
(Phosphoglyceromutase) (BPG-independent PGAM) (PGAM-I)
gi|2118335|pir||S60473 phosphoglycerate mutase (EC
5.4.2.1), 2, 3-bisphosphoglycerate-independent - common
ice plant gi|602426|gb|AAA86979.1| phosphoglyceromutase
Length = 559
Score = 263 bits (673), Expect = 8e-70
Identities = 126/147 (85%), Positives = 139/147 (93%)
Frame = -2
Query: 535 AILSRKFDQVRVNLPNSDMVGHTGDIEATIVGCKAADDAVKMILDAIEQVDGIYVVTADH 356
AILS KFDQVRVNLPNSDMVGHTGDIEAT+V CKAAD+AVKMI+DAIEQV GIYV+TADH
Sbjct: 413 AILSGKFDQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKMIIDAIEQVGGIYVITADH 472
Query: 355 GNAEDMVKRDKSGKPLLDKDGKIQILSSHTLQPVPIAIGGPGLSPGVRFRDDLPNGGLAN 176
GNAEDMVKRDK G+P +DK+G IQIL+SHTL+PVPIAIGGPGL+PGVRFR+D+P GGLAN
Sbjct: 473 GNAEDMVKRDKKGQPAMDKNGNIQILTSHTLEPVPIAIGGPGLTPGVRFRNDIPTGGLAN 532
Query: 175 VAATVMNLHGFEAPSDYEPTLVEVVDN 95
VAATVMNLHGFEAPSDYEPTL+EVV N
Sbjct: 533 VAATVMNLHGFEAPSDYEPTLIEVVSN 559
>emb|CAA06215.1| apgm [Malus x domestica]
Length = 559
Score = 261 bits (666), Expect = 5e-69
Identities = 127/147 (86%), Positives = 140/147 (94%)
Frame = -2
Query: 535 AILSRKFDQVRVNLPNSDMVGHTGDIEATIVGCKAADDAVKMILDAIEQVDGIYVVTADH 356
AILS KF+QVRVNLPN DMVGHTGDIEATIV CKAAD+AVK+ILDAIE+V GIYVVTADH
Sbjct: 413 AILSGKFEQVRVNLPNGDMVGHTGDIEATIVACKAADEAVKIILDAIEKVGGIYVVTADH 472
Query: 355 GNAEDMVKRDKSGKPLLDKDGKIQILSSHTLQPVPIAIGGPGLSPGVRFRDDLPNGGLAN 176
GNAEDMVKR+K+G+PLLDK G IQIL+SHTLQPVPIAIGGPGL+PGVRFR DLP+GGLAN
Sbjct: 473 GNAEDMVKRNKTGQPLLDKSGNIQILTSHTLQPVPIAIGGPGLAPGVRFRKDLPSGGLAN 532
Query: 175 VAATVMNLHGFEAPSDYEPTLVEVVDN 95
VAATVMNLHGF+APSDYEP+L+EVVDN
Sbjct: 533 VAATVMNLHGFQAPSDYEPSLIEVVDN 559
>sp|O24246|PMGI_PRUDU 2,3-bisphosphoglycerate-independent phosphoglycerate mutase
(Phosphoglyceromutase) (BPG-independent PGAM) (PGAM-I)
gi|7437413|pir||T09138 phosphoglycerate mutase (EC
5.4.2.1), 2, 3-bisphosphoglycerate-independent - almond
(fragment) gi|1498232|emb|CAA52928.1| phosphoglycerate
mutase [Prunus dulcis] gi|1585833|prf||2202194A
2,3-bisphosphoglycerate-independent phosphoglycerate
mutase
Length = 488
Score = 257 bits (657), Expect = 5e-68
Identities = 124/147 (84%), Positives = 139/147 (94%)
Frame = -2
Query: 535 AILSRKFDQVRVNLPNSDMVGHTGDIEATIVGCKAADDAVKMILDAIEQVDGIYVVTADH 356
AILS+KF+QVRVNLPNSDMVGHT IEAT+V CKAAD+AVK+I+DAIEQV GIYVVTADH
Sbjct: 342 AILSKKFEQVRVNLPNSDMVGHTSSIEATVVACKAADEAVKIIIDAIEQVGGIYVVTADH 401
Query: 355 GNAEDMVKRDKSGKPLLDKDGKIQILSSHTLQPVPIAIGGPGLSPGVRFRDDLPNGGLAN 176
GNAEDMVKR+K G+PLLDK+G IQIL+SHTLQPVPIAIGGPGL+PGV+FR D+PNGGLAN
Sbjct: 402 GNAEDMVKRNKKGQPLLDKNGNIQILTSHTLQPVPIAIGGPGLAPGVQFRKDVPNGGLAN 461
Query: 175 VAATVMNLHGFEAPSDYEPTLVEVVDN 95
VAATVMNLHGFEAP+DYE TL+EVVDN
Sbjct: 462 VAATVMNLHGFEAPADYETTLIEVVDN 488
>gb|AAD24857.1|AF047842_1 phosphoglycerate mutase [Solanum tuberosum]
Length = 559
Score = 257 bits (656), Expect = 7e-68
Identities = 125/147 (85%), Positives = 136/147 (92%)
Frame = -2
Query: 535 AILSRKFDQVRVNLPNSDMVGHTGDIEATIVGCKAADDAVKMILDAIEQVDGIYVVTADH 356
AILS KFDQVRVN+PNSDMVGHTGDI+ATI CKAADD VKMIL+AIEQV GI++VTADH
Sbjct: 413 AILSHKFDQVRVNIPNSDMVGHTGDIKATIEACKAADDGVKMILEAIEQVGGIFLVTADH 472
Query: 355 GNAEDMVKRDKSGKPLLDKDGKIQILSSHTLQPVPIAIGGPGLSPGVRFRDDLPNGGLAN 176
GNAEDMVKR+K G+PLLDK+G IQIL+SHTL+PVPIAIGGPGL PGVRFR DLP GGLAN
Sbjct: 473 GNAEDMVKRNKKGEPLLDKNGNIQILTSHTLEPVPIAIGGPGLLPGVRFRTDLPTGGLAN 532
Query: 175 VAATVMNLHGFEAPSDYEPTLVEVVDN 95
VAAT MNLHGFEAPSDYEPTL+EVVDN
Sbjct: 533 VAATFMNLHGFEAPSDYEPTLIEVVDN 559
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 450,563,645
Number of Sequences: 1393205
Number of extensions: 9677414
Number of successful extensions: 30574
Number of sequences better than 10.0: 178
Number of HSP's better than 10.0 without gapping: 29562
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30522
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 18173652336
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
