Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC015882A_C01 KMC015882A_c01
(537 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|O49856|FTRC_SOYBN Ferredoxin-thioredoxin reductase catalytic ... 230 9e-60
ref|NP_178547.1| putative ferredoxin-thioredoxin reductase; prot... 225 2e-58
sp|P41348|FTRC_SPIOL Ferredoxin-thioredoxin reductase catalytic ... 224 4e-58
sp|P41349|FTRD_SPIOL Ferredoxin-thioredoxin reductase catalytic ... 224 4e-58
emb|CAC39620.1| ferredoxin-thioredoxin-reductase catalytic subun... 220 1e-56
>sp|O49856|FTRC_SOYBN Ferredoxin-thioredoxin reductase catalytic chain, chloroplast
precursor (FTR-C) gi|7432748|pir||T07147
ferredoxin-thioredoxin reductase (EC 1.18.-.-) catalytic
chain B precursor - soybean gi|2765445|emb|CAA75356.1|
ferredoxin thioredoxin reductase precursor [Glycine max]
Length = 144
Score = 230 bits (586), Expect = 9e-60
Identities = 105/118 (88%), Positives = 111/118 (93%)
Frame = -1
Query: 531 VVRAQVEPSEKSIEIMRKFSEQYARKSGTYFCVDKSVTSVVIKGLADHKDSLGAPLCPCR 352
VVRAQ EPS+KS+EIMRKFSEQYARKSGTYFCVDK VTSVVIKGLADHKD+LGAPLCPCR
Sbjct: 27 VVRAQAEPSDKSVEIMRKFSEQYARKSGTYFCVDKGVTSVVIKGLADHKDTLGAPLCPCR 86
Query: 351 HYDDKPAEAQQGFWNCPCVPMRERKECHCMLFLTPENDFAGKEQAITLDEIRETTANM 178
HYDDK AE QGFWNCPCVPMRERKECHCMLFLTP+NDFAG EQ ITLDEI+E+TANM
Sbjct: 87 HYDDKAAEVAQGFWNCPCVPMRERKECHCMLFLTPDNDFAGNEQTITLDEIKESTANM 144
>ref|NP_178547.1| putative ferredoxin-thioredoxin reductase; protein id: At2g04700.1,
supported by cDNA: 40781., supported by cDNA:
gi_17380641 [Arabidopsis thaliana]
gi|25285431|pir||D84460 probable ferredoxin-thioredoxin
reductase [imported] - Arabidopsis thaliana
gi|4544427|gb|AAD22336.1| putative
ferredoxin-thioredoxin reductase [Arabidopsis thaliana]
gi|17380642|gb|AAL36151.1| putative
ferredoxin-thioredoxin reductase [Arabidopsis thaliana]
gi|21436083|gb|AAM51242.1| putative
ferredoxin-thioredoxin reductase [Arabidopsis thaliana]
gi|21593637|gb|AAM65604.1| putative
ferredoxin-thioredoxin reductase [Arabidopsis thaliana]
Length = 146
Score = 225 bits (574), Expect = 2e-58
Identities = 102/118 (86%), Positives = 110/118 (92%)
Frame = -1
Query: 531 VVRAQVEPSEKSIEIMRKFSEQYARKSGTYFCVDKSVTSVVIKGLADHKDSLGAPLCPCR 352
V+RA+ EPSEKS+EIMRKFSEQYAR+SGTYFCVDK VTSVVIKGLA+HKDS GAPLCPCR
Sbjct: 29 VIRAKTEPSEKSVEIMRKFSEQYARRSGTYFCVDKGVTSVVIKGLAEHKDSYGAPLCPCR 88
Query: 351 HYDDKPAEAQQGFWNCPCVPMRERKECHCMLFLTPENDFAGKEQAITLDEIRETTANM 178
HYDDK AE QGFWNCPCVPMRERKECHCMLFLTP+NDFAGK+Q IT DEI+ETTANM
Sbjct: 89 HYDDKAAEVGQGFWNCPCVPMRERKECHCMLFLTPDNDFAGKDQTITSDEIKETTANM 146
>sp|P41348|FTRC_SPIOL Ferredoxin-thioredoxin reductase catalytic chain, chloroplast
precursor (FTR-C) (Ferredoxin-thioredoxin reductase
subunit B) (FTR-B) (B2) gi|2144357|pir||RDSPTB
ferredoxin-thioredoxin reductase (EC 1.18.-.-) chain B
precursor - spinach gi|1103726|emb|CAA52867.1|
ferredoxin-thioredoxin reductase (FTR) [Spinacia
oleracea]
Length = 144
Score = 224 bits (572), Expect = 4e-58
Identities = 100/118 (84%), Positives = 112/118 (94%)
Frame = -1
Query: 531 VVRAQVEPSEKSIEIMRKFSEQYARKSGTYFCVDKSVTSVVIKGLADHKDSLGAPLCPCR 352
V+RAQ +PS+KS+E+MRKFSEQ+ RKS TYFCVDKSVT+VVIKGLADH+D+LGAPLCPCR
Sbjct: 27 VIRAQADPSDKSMEVMRKFSEQFCRKSDTYFCVDKSVTAVVIKGLADHRDTLGAPLCPCR 86
Query: 351 HYDDKPAEAQQGFWNCPCVPMRERKECHCMLFLTPENDFAGKEQAITLDEIRETTANM 178
HYDDK AEA+QGFWNCPCVPMRERKECHCMLFLTP+NDFAGKEQ ITLDEIRE T+NM
Sbjct: 87 HYDDKEAEAKQGFWNCPCVPMRERKECHCMLFLTPDNDFAGKEQTITLDEIREVTSNM 144
>sp|P41349|FTRD_SPIOL Ferredoxin-thioredoxin reductase catalytic chain, chloroplast
precursor (FTR-C) (Ferredoxin-thioredoxin reductase
subunit B) (FTR-B) (B1) gi|7432749|pir||T09150
ferredoxin-thioredoxin reductase (EC 1.18.-.-) chain B -
spinach gi|505189|emb|CAA54409.1| ferredoxin-thioredoxin
reductase SU B [Spinacia oleracea]
Length = 148
Score = 224 bits (572), Expect = 4e-58
Identities = 103/118 (87%), Positives = 111/118 (93%)
Frame = -1
Query: 531 VVRAQVEPSEKSIEIMRKFSEQYARKSGTYFCVDKSVTSVVIKGLADHKDSLGAPLCPCR 352
V+ ++VEPS+KS+EIMRKFSEQYARKSGTYFCVDK VTSVVIKGLA+HKDSLGAPLCPCR
Sbjct: 31 VILSKVEPSDKSVEIMRKFSEQYARKSGTYFCVDKGVTSVVIKGLAEHKDSLGAPLCPCR 90
Query: 351 HYDDKPAEAQQGFWNCPCVPMRERKECHCMLFLTPENDFAGKEQAITLDEIRETTANM 178
+YDDK AEA QGFWNCPCVPMRERKECHCMLFLTPENDFAGK+Q I LDEIRE TANM
Sbjct: 91 YYDDKAAEATQGFWNCPCVPMRERKECHCMLFLTPENDFAGKDQTIGLDEIREVTANM 148
>emb|CAC39620.1| ferredoxin-thioredoxin-reductase catalytic subunit B [Solanum
tuberosum]
Length = 148
Score = 220 bits (560), Expect = 1e-56
Identities = 98/115 (85%), Positives = 111/115 (96%)
Frame = -1
Query: 522 AQVEPSEKSIEIMRKFSEQYARKSGTYFCVDKSVTSVVIKGLADHKDSLGAPLCPCRHYD 343
A++EPSEKS+EIMRKFSEQYAR+S TYFC+DK VTSVVIKGLA+HKD+LGAPLCPCRHYD
Sbjct: 34 AKMEPSEKSVEIMRKFSEQYARRSETYFCMDKGVTSVVIKGLAEHKDTLGAPLCPCRHYD 93
Query: 342 DKPAEAQQGFWNCPCVPMRERKECHCMLFLTPENDFAGKEQAITLDEIRETTANM 178
DK AEAQQGFWNCPCVPMRERKECHCMLFLTP+NDFAG+EQ I+++EI+ETTANM
Sbjct: 94 DKAAEAQQGFWNCPCVPMRERKECHCMLFLTPDNDFAGEEQTISMEEIKETTANM 148
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 468,367,476
Number of Sequences: 1393205
Number of extensions: 10229158
Number of successful extensions: 25234
Number of sequences better than 10.0: 119
Number of HSP's better than 10.0 without gapping: 24590
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25206
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 18173652336
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
