Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC015881A_C01 KMC015881A_c01
(549 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAD56505.1| polygalacturonase inhibitor-like protein [Cicer ... 234 7e-61
ref|NP_188718.1| disease resistance protein family (LRR); protei... 208 4e-53
gb|AAM65656.1| leucine rich repeat protein, putative [Arabidopsi... 189 2e-47
gb|AAK64162.1| unknown protein [Arabidopsis thaliana] 189 2e-47
ref|NP_196798.1| leucine rich repeat protein family; protein id:... 189 2e-47
>emb|CAD56505.1| polygalacturonase inhibitor-like protein [Cicer arietinum]
Length = 322
Score = 234 bits (596), Expect = 7e-61
Identities = 112/136 (82%), Positives = 121/136 (88%)
Frame = -2
Query: 548 DLDLSRNQVSGPIPESLGKMAVLSTLNLDMNRLSGHIPKSLFVSGISDLNISHHALEGAI 369
DLDLSRNQVSGPIPESLGKMAVLSTLNLDMN+LSG IP SLF SGISDLN+S + L G +
Sbjct: 185 DLDLSRNQVSGPIPESLGKMAVLSTLNLDMNKLSGPIPASLFNSGISDLNLSRNGLNGNL 244
Query: 368 PDAFGERSYFTALDLSYNNLKGAIPKSISSAAYIGHLDLSHNHLCGAIPIGSPFDHLEAS 189
PD FG RSYFT LDLSYN+LKG IPKS+ A+YIGHLDLS+NHLCG IP+GSPFDHLEAS
Sbjct: 245 PDVFGARSYFTVLDLSYNSLKGPIPKSMGLASYIGHLDLSYNHLCGKIPVGSPFDHLEAS 304
Query: 188 SFVYNDCLCGKPLKAC 141
SFVYNDCLCGKPLK C
Sbjct: 305 SFVYNDCLCGKPLKVC 320
Score = 71.6 bits (174), Expect = 6e-12
Identities = 41/109 (37%), Positives = 61/109 (55%), Gaps = 1/109 (0%)
Frame = -2
Query: 545 LDLSRNQVSGPIPESLGKMAVLSTLNLDMNRLSGHIPKSLF-VSGISDLNISHHALEGAI 369
+DL N++S IP +G++ L+ LN+ N +SG+IP SL + + L+I ++ + G I
Sbjct: 90 IDLIGNRISSTIPSDIGRLHRLTVLNVADNAISGNIPPSLTNLRSLMHLDIRNNQISGPI 149
Query: 368 PDAFGERSYFTALDLSYNNLKGAIPKSISSAAYIGHLDLSHNHLCGAIP 222
P FG + LS N + G IP SIS + LDLS N + G IP
Sbjct: 150 PKDFGRLPMLSRALLSGNKISGPIPDSISRIYRLADLDLSRNQVSGPIP 198
Score = 63.9 bits (154), Expect = 1e-09
Identities = 39/109 (35%), Positives = 59/109 (53%), Gaps = 1/109 (0%)
Frame = -2
Query: 545 LDLSRNQVSGPIPESLGKMAVLSTLNLDMNRLSGHIPKSLF-VSGISDLNISHHALEGAI 369
L+++ N +SG IP SL + L L++ N++SG IPK + +S +S + + G I
Sbjct: 114 LNVADNAISGNIPPSLTNLRSLMHLDIRNNQISGPIPKDFGRLPMLSRALLSGNKISGPI 173
Query: 368 PDAFGERSYFTALDLSYNNLKGAIPKSISSAAYIGHLDLSHNHLCGAIP 222
PD+ LDLS N + G IP+S+ A + L+L N L G IP
Sbjct: 174 PDSISRIYRLADLDLSRNQVSGPIPESLGKMAVLSTLNLDMNKLSGPIP 222
Score = 50.8 bits (120), Expect = 1e-05
Identities = 30/102 (29%), Positives = 49/102 (47%), Gaps = 1/102 (0%)
Frame = -2
Query: 524 VSGPIPESLGKMAVLSTLNLDMNRLSGHIPKSL-FVSGISDLNISHHALEGAIPDAFGER 348
+SG IP + + L ++L NR+S IP + + ++ LN++ +A+ G IP +
Sbjct: 73 ISGEIPRCITSLPFLRIIDLIGNRISSTIPSDIGRLHRLTVLNVADNAISGNIPPSLTNL 132
Query: 347 SYFTALDLSYNNLKGAIPKSISSAAYIGHLDLSHNHLCGAIP 222
LD+ N + G IPK + LS N + G IP
Sbjct: 133 RSLMHLDIRNNQISGPIPKDFGRLPMLSRALLSGNKISGPIP 174
>ref|NP_188718.1| disease resistance protein family (LRR); protein id: At3g20820.1,
supported by cDNA: gi_17380931 [Arabidopsis thaliana]
gi|9294409|dbj|BAB02490.1| polygalacturonase
inhibitor-like protein [Arabidopsis thaliana]
gi|17380932|gb|AAL36278.1| unknown protein [Arabidopsis
thaliana] gi|21436417|gb|AAM51409.1| unknown protein
[Arabidopsis thaliana]
Length = 365
Score = 208 bits (529), Expect = 4e-53
Identities = 94/136 (69%), Positives = 117/136 (85%)
Frame = -2
Query: 548 DLDLSRNQVSGPIPESLGKMAVLSTLNLDMNRLSGHIPKSLFVSGISDLNISHHALEGAI 369
D+DLS NQ+ G IP SLG+M+VL+TLNLD N++SG IP++L S + +LN+S + L+G I
Sbjct: 227 DVDLSGNQLYGTIPPSLGRMSVLATLNLDGNKISGEIPQTLMTSSVMNLNLSRNLLQGKI 286
Query: 368 PDAFGERSYFTALDLSYNNLKGAIPKSISSAAYIGHLDLSHNHLCGAIPIGSPFDHLEAS 189
P+ FG RSYFT LDLSYNNLKG IP+SIS A++IGHLDLSHNHLCG IP+GSPFDHLEA+
Sbjct: 287 PEGFGPRSYFTVLDLSYNNLKGPIPRSISGASFIGHLDLSHNHLCGRIPVGSPFDHLEAA 346
Query: 188 SFVYNDCLCGKPLKAC 141
SF++NDCLCGKPL+AC
Sbjct: 347 SFMFNDCLCGKPLRAC 362
Score = 77.0 bits (188), Expect = 1e-13
Identities = 43/109 (39%), Positives = 65/109 (59%), Gaps = 1/109 (0%)
Frame = -2
Query: 545 LDLSRNQVSGPIPESLGKMAVLSTLNLDMNRLSGHIPKSLF-VSGISDLNISHHALEGAI 369
LDL NQ+SG IP +G++ L+ LN+ NR+SG IPKSL +S + L++ ++ + G I
Sbjct: 132 LDLIGNQISGGIPYDIGRLNRLAVLNVADNRISGSIPKSLTNLSSLMHLDLRNNLISGVI 191
Query: 368 PDAFGERSYFTALDLSYNNLKGAIPKSISSAAYIGHLDLSHNHLCGAIP 222
P G + LS N + G IP+S+++ + +DLS N L G IP
Sbjct: 192 PSDVGRLKMLSRALLSGNRITGRIPESLTNIYRLADVDLSGNQLYGTIP 240
Score = 56.6 bits (135), Expect = 2e-07
Identities = 32/102 (31%), Positives = 55/102 (53%), Gaps = 1/102 (0%)
Frame = -2
Query: 524 VSGPIPESLGKMAVLSTLNLDMNRLSGHIPKSL-FVSGISDLNISHHALEGAIPDAFGER 348
+SG IP+ + ++ L TL+L N++SG IP + ++ ++ LN++ + + G+IP +
Sbjct: 115 ISGEIPKCITRLPFLRTLDLIGNQISGGIPYDIGRLNRLAVLNVADNRISGSIPKSLTNL 174
Query: 347 SYFTALDLSYNNLKGAIPKSISSAAYIGHLDLSHNHLCGAIP 222
S LDL N + G IP + + LS N + G IP
Sbjct: 175 SSLMHLDLRNNLISGVIPSDVGRLKMLSRALLSGNRITGRIP 216
Score = 36.2 bits (82), Expect = 0.27
Identities = 22/79 (27%), Positives = 39/79 (48%), Gaps = 2/79 (2%)
Frame = -2
Query: 452 LSGHIPKSLF-VSGISDLNISH-HALEGAIPDAFGERSYFTALDLSYNNLKGAIPKSISS 279
++GHI S+ ++ +S + I+ + G IP + LDL N + G IP I
Sbjct: 90 MTGHISASICELTRLSAITIADWKGISGEIPKCITRLPFLRTLDLIGNQISGGIPYDIGR 149
Query: 278 AAYIGHLDLSHNHLCGAIP 222
+ L+++ N + G+IP
Sbjct: 150 LNRLAVLNVADNRISGSIP 168
>gb|AAM65656.1| leucine rich repeat protein, putative [Arabidopsis thaliana]
Length = 371
Score = 189 bits (479), Expect = 2e-47
Identities = 88/136 (64%), Positives = 111/136 (80%)
Frame = -2
Query: 548 DLDLSRNQVSGPIPESLGKMAVLSTLNLDMNRLSGHIPKSLFVSGISDLNISHHALEGAI 369
DL+LS N+++GPIP S GKM+VL+TLNLD N +SG IP SL S IS+LN+S + + G+I
Sbjct: 234 DLELSMNRLTGPIPASFGKMSVLATLNLDGNLISGMIPGSLLASSISNLNLSGNLITGSI 293
Query: 368 PDAFGERSYFTALDLSYNNLKGAIPKSISSAAYIGHLDLSHNHLCGAIPIGSPFDHLEAS 189
P+ FG RSYFT LDL+ N L+G IP SI++A++IGHLD+SHNHLCG IP+GSPFDHL+A+
Sbjct: 294 PNTFGPRSYFTVLDLANNRLQGPIPASITAASFIGHLDVSHNHLCGKIPMGSPFDHLDAT 353
Query: 188 SFVYNDCLCGKPLKAC 141
SF YN CLCGKPL C
Sbjct: 354 SFAYNACLCGKPLGNC 369
Score = 68.2 bits (165), Expect = 6e-11
Identities = 41/109 (37%), Positives = 61/109 (55%), Gaps = 1/109 (0%)
Frame = -2
Query: 545 LDLSRNQVSGPIPESLGKMAVLSTLNLDMNRLSGHIPKSLF-VSGISDLNISHHALEGAI 369
LDL N+ SG IP ++GK+ L LNL N L G IP S+ + +S L++ ++ + G I
Sbjct: 139 LDLVGNKFSGVIPANIGKLLRLKVLNLADNHLYGVIPPSITRLVSLSHLDLRNNNISGVI 198
Query: 368 PDAFGERSYFTALDLSYNNLKGAIPKSISSAAYIGHLDLSHNHLCGAIP 222
P G + + LS N + G IP+S++ + L+LS N L G IP
Sbjct: 199 PRDIGRLKMVSRVLLSGNKISGQIPESLTRIYRLADLELSMNRLTGPIP 247
Score = 53.5 bits (127), Expect = 2e-06
Identities = 33/102 (32%), Positives = 52/102 (50%), Gaps = 1/102 (0%)
Frame = -2
Query: 524 VSGPIPESLGKMAVLSTLNLDMNRLSGHIPKSLF-VSGISDLNISHHALEGAIPDAFGER 348
+SG IP + + L L+L N+ SG IP ++ + + LN++ + L G IP +
Sbjct: 122 ISGVIPSCIENLPFLRHLDLVGNKFSGVIPANIGKLLRLKVLNLADNHLYGVIPPSITRL 181
Query: 347 SYFTALDLSYNNLKGAIPKSISSAAYIGHLDLSHNHLCGAIP 222
+ LDL NN+ G IP+ I + + LS N + G IP
Sbjct: 182 VSLSHLDLRNNNISGVIPRDIGRLKMVSRVLLSGNKISGQIP 223
>gb|AAK64162.1| unknown protein [Arabidopsis thaliana]
Length = 371
Score = 189 bits (479), Expect = 2e-47
Identities = 88/136 (64%), Positives = 111/136 (80%)
Frame = -2
Query: 548 DLDLSRNQVSGPIPESLGKMAVLSTLNLDMNRLSGHIPKSLFVSGISDLNISHHALEGAI 369
DL+LS N+++GPIP S GKM+VL+TLNLD N +SG IP SL S IS+LN+S + + G+I
Sbjct: 234 DLELSMNRLTGPIPASFGKMSVLATLNLDGNLISGMIPGSLLASSISNLNLSGNLITGSI 293
Query: 368 PDAFGERSYFTALDLSYNNLKGAIPKSISSAAYIGHLDLSHNHLCGAIPIGSPFDHLEAS 189
P+ FG RSYFT LDL+ N L+G IP SI++A++IGHLD+SHNHLCG IP+GSPFDHL+A+
Sbjct: 294 PNTFGPRSYFTVLDLANNRLQGLIPASITAASFIGHLDVSHNHLCGKIPMGSPFDHLDAT 353
Query: 188 SFVYNDCLCGKPLKAC 141
SF YN CLCGKPL C
Sbjct: 354 SFAYNACLCGKPLGNC 369
Score = 67.4 bits (163), Expect = 1e-10
Identities = 41/109 (37%), Positives = 60/109 (54%), Gaps = 1/109 (0%)
Frame = -2
Query: 545 LDLSRNQVSGPIPESLGKMAVLSTLNLDMNRLSGHIPKSLF-VSGISDLNISHHALEGAI 369
LDL N+ SG IP ++GK+ L LNL N L G IP S+ + +S L++ ++ + G I
Sbjct: 139 LDLVGNKFSGVIPANIGKLLRLKVLNLADNHLYGVIPPSITRLVSLSHLDLRNNNISGVI 198
Query: 368 PDAFGERSYFTALDLSYNNLKGAIPKSISSAAYIGHLDLSHNHLCGAIP 222
P G + + LS N + G IP S++ + L+LS N L G IP
Sbjct: 199 PRDIGRLKMVSRVLLSGNKISGQIPDSLTRIYRLADLELSMNRLTGPIP 247
Score = 53.5 bits (127), Expect = 2e-06
Identities = 33/102 (32%), Positives = 52/102 (50%), Gaps = 1/102 (0%)
Frame = -2
Query: 524 VSGPIPESLGKMAVLSTLNLDMNRLSGHIPKSLF-VSGISDLNISHHALEGAIPDAFGER 348
+SG IP + + L L+L N+ SG IP ++ + + LN++ + L G IP +
Sbjct: 122 ISGVIPSCIENLPFLRHLDLVGNKFSGVIPANIGKLLRLKVLNLADNHLYGVIPPSITRL 181
Query: 347 SYFTALDLSYNNLKGAIPKSISSAAYIGHLDLSHNHLCGAIP 222
+ LDL NN+ G IP+ I + + LS N + G IP
Sbjct: 182 VSLSHLDLRNNNISGVIPRDIGRLKMVSRVLLSGNKISGQIP 223
>ref|NP_196798.1| leucine rich repeat protein family; protein id: At5g12940.1,
supported by cDNA: 41409., supported by cDNA:
gi_14532721 [Arabidopsis thaliana]
gi|11358226|pir||T49908 hypothetical protein T24H18.110
- Arabidopsis thaliana gi|7630050|emb|CAB88258.1|
putative protein [Arabidopsis thaliana]
Length = 371
Score = 189 bits (479), Expect = 2e-47
Identities = 88/136 (64%), Positives = 111/136 (80%)
Frame = -2
Query: 548 DLDLSRNQVSGPIPESLGKMAVLSTLNLDMNRLSGHIPKSLFVSGISDLNISHHALEGAI 369
DL+LS N+++GPIP S GKM+VL+TLNLD N +SG IP SL S IS+LN+S + + G+I
Sbjct: 234 DLELSMNRLTGPIPASFGKMSVLATLNLDGNLISGMIPGSLLASSISNLNLSGNLITGSI 293
Query: 368 PDAFGERSYFTALDLSYNNLKGAIPKSISSAAYIGHLDLSHNHLCGAIPIGSPFDHLEAS 189
P+ FG RSYFT LDL+ N L+G IP SI++A++IGHLD+SHNHLCG IP+GSPFDHL+A+
Sbjct: 294 PNTFGPRSYFTVLDLANNRLQGPIPASITAASFIGHLDVSHNHLCGKIPMGSPFDHLDAT 353
Query: 188 SFVYNDCLCGKPLKAC 141
SF YN CLCGKPL C
Sbjct: 354 SFAYNACLCGKPLGNC 369
Score = 67.4 bits (163), Expect = 1e-10
Identities = 41/109 (37%), Positives = 60/109 (54%), Gaps = 1/109 (0%)
Frame = -2
Query: 545 LDLSRNQVSGPIPESLGKMAVLSTLNLDMNRLSGHIPKSLF-VSGISDLNISHHALEGAI 369
LDL N+ SG IP ++GK+ L LNL N L G IP S+ + +S L++ ++ + G I
Sbjct: 139 LDLVGNKFSGVIPANIGKLLRLKVLNLADNHLYGVIPPSITRLVSLSHLDLRNNNISGVI 198
Query: 368 PDAFGERSYFTALDLSYNNLKGAIPKSISSAAYIGHLDLSHNHLCGAIP 222
P G + + LS N + G IP S++ + L+LS N L G IP
Sbjct: 199 PRDIGRLKMVSRVLLSGNKISGQIPDSLTRIYRLADLELSMNRLTGPIP 247
Score = 53.5 bits (127), Expect = 2e-06
Identities = 33/102 (32%), Positives = 52/102 (50%), Gaps = 1/102 (0%)
Frame = -2
Query: 524 VSGPIPESLGKMAVLSTLNLDMNRLSGHIPKSLF-VSGISDLNISHHALEGAIPDAFGER 348
+SG IP + + L L+L N+ SG IP ++ + + LN++ + L G IP +
Sbjct: 122 ISGVIPSCIENLPFLRHLDLVGNKFSGVIPANIGKLLRLKVLNLADNHLYGVIPPSITRL 181
Query: 347 SYFTALDLSYNNLKGAIPKSISSAAYIGHLDLSHNHLCGAIP 222
+ LDL NN+ G IP+ I + + LS N + G IP
Sbjct: 182 VSLSHLDLRNNNISGVIPRDIGRLKMVSRVLLSGNKISGQIP 223
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 480,749,051
Number of Sequences: 1393205
Number of extensions: 10440018
Number of successful extensions: 39023
Number of sequences better than 10.0: 1502
Number of HSP's better than 10.0 without gapping: 26191
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32578
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 18947112822
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
