Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC015874A_C01 KMC015874A_c01
(469 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAN33150.1| RloA [Campylobacter jejuni] 32 2.5
gb|AAO39490.1| SD17909p [Drosophila melanogaster] 32 4.3
ref|NP_477157.1| Calnexin 99A CG11958-PB gi|24651030|ref|NP_7332... 32 4.3
gb|AAO25073.1| GH03249p [Drosophila melanogaster] 32 4.3
emb|CAA67846.1| calnexin [Drosophila melanogaster] 32 4.3
>gb|AAN33150.1| RloA [Campylobacter jejuni]
Length = 434
Score = 32.3 bits (72), Expect = 2.5
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = +2
Query: 137 LSTHYTHYYGNFLIKFNIFH-KNINKLS-QIIFFWES*QLPNQFSYERDQFHNCQQRRK 307
L+TH FL+ N+FH +N+NK + Q+IF + NQ + RDQ C+++ K
Sbjct: 332 LNTHLHPLMTKFLV--NLFHNENLNKSNAQLIFTTHDTSILNQDVFRRDQIWFCEKQNK 388
>gb|AAO39490.1| SD17909p [Drosophila melanogaster]
Length = 677
Score = 31.6 bits (70), Expect = 4.3
Identities = 12/36 (33%), Positives = 22/36 (60%)
Frame = +3
Query: 93 KKHCNTPKNILKKPASVRTTHTIMVIF*SNSTFSIK 200
+KHCN PKN L++P + H ++ +++F I+
Sbjct: 295 EKHCNKPKNRLEEPFKDKLPHLYQLVVRPDNSFEIR 330
>ref|NP_477157.1| Calnexin 99A CG11958-PB gi|24651030|ref|NP_733286.1| Calnexin 99A
CG11958-PA gi|23172561|gb|AAF56887.2| CG11958-PA
[Drosophila melanogaster] gi|23172562|gb|AAN14170.1|
CG11958-PB [Drosophila melanogaster]
Length = 605
Score = 31.6 bits (70), Expect = 4.3
Identities = 12/36 (33%), Positives = 22/36 (60%)
Frame = +3
Query: 93 KKHCNTPKNILKKPASVRTTHTIMVIF*SNSTFSIK 200
+KHCN PKN L++P + H ++ +++F I+
Sbjct: 223 EKHCNKPKNRLEEPFKDKLPHLYQLVVRPDNSFEIR 258
>gb|AAO25073.1| GH03249p [Drosophila melanogaster]
Length = 605
Score = 31.6 bits (70), Expect = 4.3
Identities = 12/36 (33%), Positives = 22/36 (60%)
Frame = +3
Query: 93 KKHCNTPKNILKKPASVRTTHTIMVIF*SNSTFSIK 200
+KHCN PKN L++P + H ++ +++F I+
Sbjct: 223 EKHCNKPKNRLEEPFKDKLPHLYQLVVRPDNSFEIR 258
>emb|CAA67846.1| calnexin [Drosophila melanogaster]
Length = 605
Score = 31.6 bits (70), Expect = 4.3
Identities = 12/36 (33%), Positives = 22/36 (60%)
Frame = +3
Query: 93 KKHCNTPKNILKKPASVRTTHTIMVIF*SNSTFSIK 200
+KHCN PKN L++P + H ++ +++F I+
Sbjct: 223 EKHCNKPKNRLEEPFKDKLPHLYQLVVRPDNSFEIR 258
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 373,220,812
Number of Sequences: 1393205
Number of extensions: 7393035
Number of successful extensions: 12502
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 12235
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12500
length of database: 448,689,247
effective HSP length: 113
effective length of database: 291,257,082
effective search space used: 12232797444
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
