Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC015861A_C01 KMC015861A_c01
(590 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_568629.1| expressed protein; protein id: At5g43750.1, sup... 186 1e-46
gb|AAM62895.1| unknown [Arabidopsis thaliana] 186 1e-46
dbj|BAB90754.1| OSJNBa0052O12.12 [Oryza sativa (japonica cultiva... 131 7e-30
pir||T32258 hypothetical protein C24A1.3 - Caenorhabditis elegans 32 6.0
ref|NP_497240.1| Protein kinase with ankyrin repeat, possibly N-... 32 6.0
>ref|NP_568629.1| expressed protein; protein id: At5g43750.1, supported by cDNA:
16944. [Arabidopsis thaliana]
gi|10177943|dbj|BAB11302.1| gene_id:MQD19.9~unknown
protein [Arabidopsis thaliana]
gi|28393512|gb|AAO42177.1| unknown protein [Arabidopsis
thaliana] gi|28973171|gb|AAO63910.1| unknown protein
[Arabidopsis thaliana]
Length = 212
Score = 186 bits (473), Expect = 1e-46
Identities = 81/111 (72%), Positives = 99/111 (88%)
Frame = -2
Query: 589 IAEDIAATEPPTGFQGIISWLFPPAIAAGVFFDVPGEYLYIAAGIFTIVFCVIEMDKPDK 410
IA+DIAA + GFQG+IS +F PAIA G++FD PGEYL+I A +FT+VFC+IEMDKPD+
Sbjct: 102 IADDIAAVDQTNGFQGLISCMFLPAIALGMYFDAPGEYLFIGAALFTVVFCIIEMDKPDQ 161
Query: 409 PHHFEPQIYNMERGSRDKLISDYNTMSIWDFNEKYGDIWDFTIKKDDIITR 257
PH+FEPQIY +ERG+RDKLI+DYNTMSIWDFN+KYGD+WDFTI+KDDI TR
Sbjct: 162 PHNFEPQIYKLERGARDKLINDYNTMSIWDFNDKYGDVWDFTIEKDDIATR 212
>gb|AAM62895.1| unknown [Arabidopsis thaliana]
Length = 212
Score = 186 bits (473), Expect = 1e-46
Identities = 81/111 (72%), Positives = 99/111 (88%)
Frame = -2
Query: 589 IAEDIAATEPPTGFQGIISWLFPPAIAAGVFFDVPGEYLYIAAGIFTIVFCVIEMDKPDK 410
IA+DIAA + GFQG+IS +F PAIA G++FD PGEYL+I A +FT+VFC+IEMDKPD+
Sbjct: 102 IADDIAAVDQTNGFQGLISCMFLPAIALGMYFDAPGEYLFIGAALFTVVFCIIEMDKPDQ 161
Query: 409 PHHFEPQIYNMERGSRDKLISDYNTMSIWDFNEKYGDIWDFTIKKDDIITR 257
PH+FEPQIY +ERG+RDKLI+DYNTMSIWDFN+KYGD+WDFTI+KDDI TR
Sbjct: 162 PHNFEPQIYKLERGARDKLINDYNTMSIWDFNDKYGDVWDFTIEKDDIATR 212
>dbj|BAB90754.1| OSJNBa0052O12.12 [Oryza sativa (japonica cultivar-group)]
Length = 711
Score = 131 bits (329), Expect = 7e-30
Identities = 55/76 (72%), Positives = 66/76 (86%)
Frame = -2
Query: 484 GEYLYIAAGIFTIVFCVIEMDKPDKPHHFEPQIYNMERGSRDKLISDYNTMSIWDFNEKY 305
GEYLYI A +F +VFCVIEMDKPDKPH+FEP+IY MER +RDKLI+DYNTM IWDFNEKY
Sbjct: 634 GEYLYIGAAVFVVVFCVIEMDKPDKPHNFEPEIYMMERSARDKLIADYNTMDIWDFNEKY 693
Query: 304 GDIWDFTIKKDDIITR 257
G++WDFT+ + D I +
Sbjct: 694 GELWDFTVDRRDEIVK 709
>pir||T32258 hypothetical protein C24A1.3 - Caenorhabditis elegans
Length = 842
Score = 32.0 bits (71), Expect = 6.0
Identities = 22/88 (25%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Frame = +2
Query: 170 HNKLKRVALILMNHYIQEL--TSNGICSKELSGDYVILLDCKIPNVPIFFIEIPYAHGVV 343
H K +L+++N I+++ T++ IC++ L GD + L C + I + + +
Sbjct: 246 HYAAKSGSLVILNMLIKQVRGTNDRICARNLYGDTALHLSCYSGRLDIVKSILDSSPTNI 305
Query: 344 VTYQLV-SRSPLHVVYLRFKVVRFIRFI 424
V + V S +PLH K + + F+
Sbjct: 306 VNMENVFSETPLHAACTGGKSIELVSFL 333
>ref|NP_497240.1| Protein kinase with ankyrin repeat, possibly N-myristoylated
[Caenorhabditis elegans] gi|14573851|gb|AAB70312.2|
Hypothetical protein C24A1.3 [Caenorhabditis elegans]
Length = 850
Score = 32.0 bits (71), Expect = 6.0
Identities = 22/88 (25%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Frame = +2
Query: 170 HNKLKRVALILMNHYIQEL--TSNGICSKELSGDYVILLDCKIPNVPIFFIEIPYAHGVV 343
H K +L+++N I+++ T++ IC++ L GD + L C + I + + +
Sbjct: 254 HYAAKSGSLVILNMLIKQVRGTNDRICARNLYGDTALHLSCYSGRLDIVKSILDSSPTNI 313
Query: 344 VTYQLV-SRSPLHVVYLRFKVVRFIRFI 424
V + V S +PLH K + + F+
Sbjct: 314 VNMENVFSETPLHAACTGGKSIELVSFL 341
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 518,290,154
Number of Sequences: 1393205
Number of extensions: 11577034
Number of successful extensions: 30141
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 29149
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30137
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 22569056698
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
