Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC015860A_C01 KMC015860A_c01
(542 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EAA21333.1| s-antigen protein precursor, putative [Plasmodium... 39 0.031
ref|NP_193333.1| pectinesterase family; protein id: At4g15980.1 ... 39 0.031
gb|AAA29104.1| K2 36 0.35
dbj|BAC22730.1| serine-rich protein [Entamoeba histolytica] 35 0.45
gb|AAH29843.1| RIKEN cDNA 5730511K23 gene [Mus musculus] 35 0.45
>gb|EAA21333.1| s-antigen protein precursor, putative [Plasmodium yoelii yoelii]
Length = 1112
Score = 39.3 bits (90), Expect = 0.031
Identities = 23/63 (36%), Positives = 30/63 (47%), Gaps = 7/63 (11%)
Frame = -2
Query: 541 GGSPS-------NENDGSDSDKSPKDDDRGGSENPSAESEIQPAPESSGSHSLDNQPLES 383
GG PS NE DGS SDK P D D + PS + PE+ S + +PLE+
Sbjct: 710 GGGPSSEPGKLGNEPDGSGSDKDPSDKD-PSDKGPSDKGPSDNGPETKESQNTSEKPLEN 768
Query: 382 SEY 374
+
Sbjct: 769 GSF 771
>ref|NP_193333.1| pectinesterase family; protein id: At4g15980.1 [Arabidopsis
thaliana] gi|7485174|pir||G71425 hypothetical protein -
Arabidopsis thaliana gi|2244956|emb|CAB10377.1|
pectinesterase like protein [Arabidopsis thaliana]
gi|7268346|emb|CAB78640.1| pectinesterase like protein
[Arabidopsis thaliana]
Length = 701
Score = 39.3 bits (90), Expect = 0.031
Identities = 23/61 (37%), Positives = 32/61 (51%), Gaps = 3/61 (4%)
Frame = -2
Query: 538 GSPSNENDGSDSDKSPKDDDRGGSENPSAESEIQPAPESSGSHSLD---NQPLESSEYHQ 368
GS +E+ GS D P +D S + SE QP SS + S D N+PL+SS+ Q
Sbjct: 226 GSSRDESVGSSQDSPPNEDSSDDSPSTVDSSENQPVDSSSENQSSDSSNNRPLDSSKNQQ 285
Query: 367 L 365
+
Sbjct: 286 M 286
>gb|AAA29104.1| K2
Length = 242
Score = 35.8 bits (81), Expect = 0.35
Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = -2
Query: 532 PSNENDGSDSDKSPKDDDRGGSENPSAESEIQP--APESSGSHSLDNQPLESS 380
P N+ + S SDK + S+ P A S +P PE+S S DN+P SS
Sbjct: 129 PDNKPEESSSDKPDNKPEASSSDKPEASSSDKPDNKPEASSSDKPDNKPEASS 181
Score = 34.7 bits (78), Expect = 0.77
Identities = 20/52 (38%), Positives = 28/52 (53%)
Frame = -2
Query: 535 SPSNENDGSDSDKSPKDDDRGGSENPSAESEIQPAPESSGSHSLDNQPLESS 380
S S++ + S SDK + S+ P A S +P E+S S DN+P ESS
Sbjct: 88 SSSDKPEASSSDKPDNKPEASSSDKPEASSSDKP--EASSSDKPDNKPEESS 137
Score = 32.0 bits (71), Expect = 5.0
Identities = 19/53 (35%), Positives = 24/53 (44%), Gaps = 2/53 (3%)
Frame = -2
Query: 532 PSNENDGSDSDKSPKDDDRGGSENPSAESEIQP--APESSGSHSLDNQPLESS 380
P N+ + S SDK P A S +P PE+S S DN+P SS
Sbjct: 141 PDNKPEASSSDKPEASSSDKPDNKPEASSSDKPDNKPEASSSDKPDNKPEASS 193
Score = 31.6 bits (70), Expect = 6.5
Identities = 20/53 (37%), Positives = 26/53 (48%), Gaps = 2/53 (3%)
Frame = -2
Query: 532 PSNENDGSDSDKSPKDDDRGGSENPSAESEIQP--APESSGSHSLDNQPLESS 380
P N+ + S SDK + S+ P A S +P PE S S DN+P SS
Sbjct: 101 PDNKPEASSSDKP----EASSSDKPEASSSDKPDNKPEESSSDKPDNKPEASS 149
Score = 31.2 bits (69), Expect = 8.5
Identities = 18/54 (33%), Positives = 27/54 (49%), Gaps = 2/54 (3%)
Frame = -2
Query: 535 SPSNENDGSDSDKSPKDDDRGGSENPSAESEIQPA--PESSGSHSLDNQPLESS 380
S S++ + S SDK + S+ P + E + PE+S S DN+P SS
Sbjct: 116 SSSDKPEASSSDKPDNKPEESSSDKPDNKPEASSSDKPEASSSDKPDNKPEASS 169
Score = 31.2 bits (69), Expect = 8.5
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Frame = -2
Query: 535 SPSNENDGSDSDKSPKDDDRG-GSENPSAESEIQPA----PESSGSHSLDNQPLESS 380
S SN D D++ K DD S N ++ +++ + PE+S S DN+P SS
Sbjct: 53 SSSNTGDEPDNNSEAKSDDEPEASSNDKSDDKVEASSSDKPEASSSDKPDNKPEASS 109
>dbj|BAC22730.1| serine-rich protein [Entamoeba histolytica]
Length = 129
Score = 35.4 bits (80), Expect = 0.45
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = -2
Query: 535 SPSNENDGSDSDKSPKDDDRGGSENPSAESEIQP--APESSGSHSLDNQPLESS 380
S S+ ++ S SDK + S+ P A S +P PE+S S DN+P SS
Sbjct: 4 SSSDNSESSSSDKPDNKPEASSSDKPEASSSDKPDNKPEASSSDKPDNKPEASS 57
Score = 32.0 bits (71), Expect = 5.0
Identities = 19/53 (35%), Positives = 24/53 (44%), Gaps = 2/53 (3%)
Frame = -2
Query: 532 PSNENDGSDSDKSPKDDDRGGSENPSAESEIQP--APESSGSHSLDNQPLESS 380
P N+ + S SDK P A S +P PE+S S DN+P SS
Sbjct: 17 PDNKPEASSSDKPEASSSDKPDNKPEASSSDKPDNKPEASSSDKPDNKPEASS 69
Score = 31.2 bits (69), Expect = 8.5
Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 6/57 (10%)
Frame = -2
Query: 532 PSNENDGSDSDKSPKDDDRGGSENPSAESEIQPA------PESSGSHSLDNQPLESS 380
P N+ + S SDK + S+ P + E + PE+S S DN+P SS
Sbjct: 37 PDNKPEASSSDKPDNKPEASSSDKPDNKPEASSSDKPDNKPEASSSDKPDNKPEASS 93
Score = 31.2 bits (69), Expect = 8.5
Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 6/57 (10%)
Frame = -2
Query: 532 PSNENDGSDSDKSPKDDDRGGSENPSAESEIQPA------PESSGSHSLDNQPLESS 380
P N+ + S SDK + S+ P + E + PE+S S DN+P SS
Sbjct: 61 PDNKPEASSSDKPDNKPEASSSDKPDNKPEASSSDKPDNKPEASSSDKPDNKPEASS 117
Score = 31.2 bits (69), Expect = 8.5
Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 6/57 (10%)
Frame = -2
Query: 532 PSNENDGSDSDKSPKDDDRGGSENPSAESEIQPA------PESSGSHSLDNQPLESS 380
P N+ + S SDK + S+ P + E + PE+S S DN+P SS
Sbjct: 49 PDNKPEASSSDKPDNKPEASSSDKPDNKPEASSSDKPDNKPEASSSDKPDNKPEASS 105
>gb|AAH29843.1| RIKEN cDNA 5730511K23 gene [Mus musculus]
Length = 535
Score = 35.4 bits (80), Expect = 0.45
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = -2
Query: 541 GGSPSNENDGSDSDKSPKDDDRGGSENPSAESEIQPAPESSGS 413
GGS + GS S+K +D+ GSE+ E + A + SGS
Sbjct: 392 GGSDEEQEKGSSSEKEGSEDEHSGSESDREEGDRDEASDKSGS 434
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 492,651,667
Number of Sequences: 1393205
Number of extensions: 11463712
Number of successful extensions: 41438
Number of sequences better than 10.0: 91
Number of HSP's better than 10.0 without gapping: 36560
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40691
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 18750593680
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
