Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC015859A_C01 KMC015859A_c01
(611 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_187646.1| putative ATPase; protein id: At3g10350.1 [Arabi... 133 2e-30
dbj|BAB09846.1| arsenite translocating ATPase-like protein [Arab... 121 8e-27
ref|NP_200881.1| ATPase - like protein; protein id: At5g60730.1 ... 121 8e-27
emb|CAB54139.1| ATPase [Solanum tuberosum] 95 8e-19
gb|AAL96261.1|AF482963_1 arsenite transport subunit A [Dictyoste... 47 2e-04
>ref|NP_187646.1| putative ATPase; protein id: At3g10350.1 [Arabidopsis thaliana]
gi|6056208|gb|AAF02825.1|AC009400_21 putative ATPase
[Arabidopsis thaliana]
Length = 386
Score = 133 bits (334), Expect = 2e-30
Identities = 63/77 (81%), Positives = 73/77 (93%)
Frame = -2
Query: 610 LKKESVPVKRLIVNQILPPSASDCKFCSMKRKDQTRALDMIQNDPELSSLLMIQAPLVDV 431
LKKESVPVKRLIVNQ+LPPS+SDCKFCS+KRKDQ RALDMI+ D ELS+L +++APLVD+
Sbjct: 310 LKKESVPVKRLIVNQLLPPSSSDCKFCSIKRKDQMRALDMIREDSELSALTLMEAPLVDM 369
Query: 430 EIRGVPALKFLGDIIWK 380
EIRGVPAL+FLGDIIWK
Sbjct: 370 EIRGVPALRFLGDIIWK 386
>dbj|BAB09846.1| arsenite translocating ATPase-like protein [Arabidopsis thaliana]
Length = 417
Score = 121 bits (303), Expect = 8e-27
Identities = 56/77 (72%), Positives = 68/77 (87%)
Frame = -2
Query: 610 LKKESVPVKRLIVNQILPPSASDCKFCSMKRKDQTRALDMIQNDPELSSLLMIQAPLVDV 431
L+KE+VPV RLIVNQ+LP S SDCKFCS++RK+QTR L +IQND ELS L +IQ+PL+D
Sbjct: 341 LRKENVPVHRLIVNQLLPQSESDCKFCSIRRKEQTRVLGLIQNDTELSGLKLIQSPLLDA 400
Query: 430 EIRGVPALKFLGDIIWK 380
EIRGVPALKF+GD+IWK
Sbjct: 401 EIRGVPALKFMGDLIWK 417
>ref|NP_200881.1| ATPase - like protein; protein id: At5g60730.1 [Arabidopsis
thaliana]
Length = 393
Score = 121 bits (303), Expect = 8e-27
Identities = 56/77 (72%), Positives = 68/77 (87%)
Frame = -2
Query: 610 LKKESVPVKRLIVNQILPPSASDCKFCSMKRKDQTRALDMIQNDPELSSLLMIQAPLVDV 431
L+KE+VPV RLIVNQ+LP S SDCKFCS++RK+QTR L +IQND ELS L +IQ+PL+D
Sbjct: 317 LRKENVPVHRLIVNQLLPQSESDCKFCSIRRKEQTRVLGLIQNDTELSGLKLIQSPLLDA 376
Query: 430 EIRGVPALKFLGDIIWK 380
EIRGVPALKF+GD+IWK
Sbjct: 377 EIRGVPALKFMGDLIWK 393
>emb|CAB54139.1| ATPase [Solanum tuberosum]
Length = 369
Score = 94.7 bits (234), Expect = 8e-19
Identities = 45/51 (88%), Positives = 48/51 (93%)
Frame = -2
Query: 610 LKKESVPVKRLIVNQILPPSASDCKFCSMKRKDQTRALDMIQNDPELSSLL 458
LK E VPVKRLI NQILPPSASDCKFC+MKRKDQ+RALDMIQNDPELSSL+
Sbjct: 319 LKMEDVPVKRLIANQILPPSASDCKFCAMKRKDQSRALDMIQNDPELSSLM 369
>gb|AAL96261.1|AF482963_1 arsenite transport subunit A [Dictyostelium discoideum]
Length = 329
Score = 47.4 bits (111), Expect = 2e-04
Identities = 27/77 (35%), Positives = 43/77 (55%)
Frame = -2
Query: 610 LKKESVPVKRLIVNQILPPSASDCKFCSMKRKDQTRALDMIQNDPELSSLLMIQAPLVDV 431
L K + V +IVNQI+ P DC C+ ++K Q + LD I + + + PL+
Sbjct: 241 LTKLDIDVHNVIVNQIVYPE-KDCSLCNARQKMQKKYLDQIAD--LYFDFHVTKLPLLKA 297
Query: 430 EIRGVPALKFLGDIIWK 380
E+RGVP+LK +++ K
Sbjct: 298 EVRGVPSLKLFSELLIK 314
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 483,626,252
Number of Sequences: 1393205
Number of extensions: 9796696
Number of successful extensions: 20892
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 20401
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20885
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 24568846532
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
