Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC015776A_C01 KMC015776A_c01
(585 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_187483.1| thioredoxin-like protein; protein id: At3g08710... 175 4e-43
gb|AAN63619.1|AF435818_1 thioredoxin h-like protein [Nicotiana t... 171 8e-42
gb|AAN63617.1|AF435816_1 thioredoxin h-like protein [Zea mays] 157 1e-37
gb|AAN63616.1|AF435815_1 thioredoxin h-like protein [Hordeum vul... 157 1e-37
gb|AAO16555.1| thioredoxin h [Leymus chinensis] 157 1e-37
>ref|NP_187483.1| thioredoxin-like protein; protein id: At3g08710.1 [Arabidopsis
thaliana] gi|12322718|gb|AAG51342.1|AC012562_3
thioredoxin-like protein; 56513-57227 [Arabidopsis
thaliana]
Length = 140
Score = 175 bits (443), Expect = 4e-43
Identities = 81/102 (79%), Positives = 95/102 (92%)
Frame = -3
Query: 580 KLEEAKRDGKIVIANFSATWCGPCKIIAPYYCELSEKYTSMMFLLVDVDELTDFSTSWDI 401
KL EA RDGKIV+ANFSATWCGPCKI+AP++ ELSEK++S+MFLLVDVDEL+DFS+SWDI
Sbjct: 37 KLAEADRDGKIVVANFSATWCGPCKIVAPFFIELSEKHSSLMFLLVDVDELSDFSSSWDI 96
Query: 400 KATPTFFFLKDGQQLDKLVGANRPELEKKVVAIADSVPESKQ 275
KATPTFFFLK+GQQ+ KLVGAN+PEL+KKV +I DSVPES Q
Sbjct: 97 KATPTFFFLKNGQQIGKLVGANKPELQKKVTSIIDSVPESPQ 138
>gb|AAN63619.1|AF435818_1 thioredoxin h-like protein [Nicotiana tabacum]
Length = 152
Score = 171 bits (432), Expect = 8e-42
Identities = 77/97 (79%), Positives = 91/97 (93%)
Frame = -3
Query: 583 QKLEEAKRDGKIVIANFSATWCGPCKIIAPYYCELSEKYTSMMFLLVDVDELTDFSTSWD 404
QKL EA ++GKIVIANFSA+WCGPC++IAP+YCELSEKY S+MFL VDVDELT+FS+SWD
Sbjct: 47 QKLAEANKEGKIVIANFSASWCGPCRMIAPFYCELSEKYLSLMFLTVDVDELTEFSSSWD 106
Query: 403 IKATPTFFFLKDGQQLDKLVGANRPELEKKVVAIADS 293
IKATPTFFFLKD QQ+DKLVGAN+PEL+KK+ AIAD+
Sbjct: 107 IKATPTFFFLKDSQQIDKLVGANKPELQKKITAIADT 143
>gb|AAN63617.1|AF435816_1 thioredoxin h-like protein [Zea mays]
Length = 133
Score = 157 bits (396), Expect = 1e-37
Identities = 69/97 (71%), Positives = 86/97 (88%)
Frame = -3
Query: 583 QKLEEAKRDGKIVIANFSATWCGPCKIIAPYYCELSEKYTSMMFLLVDVDELTDFSTSWD 404
QK+ EA RDGK V+ANFSA+WCGPC++IAP Y E+S+ Y +MFL +DVD+L DFS+SWD
Sbjct: 34 QKIAEANRDGKTVVANFSASWCGPCRVIAPVYAEMSKTYPQLMFLTIDVDDLMDFSSSWD 93
Query: 403 IKATPTFFFLKDGQQLDKLVGANRPELEKKVVAIADS 293
I+ATPTFFFLK+GQQ+DKLVGAN+PELEKKV+A AD+
Sbjct: 94 IRATPTFFFLKNGQQIDKLVGANKPELEKKVLAAADA 130
>gb|AAN63616.1|AF435815_1 thioredoxin h-like protein [Hordeum vulgare subsp. vulgare]
Length = 131
Score = 157 bits (396), Expect = 1e-37
Identities = 68/96 (70%), Positives = 86/96 (88%)
Frame = -3
Query: 583 QKLEEAKRDGKIVIANFSATWCGPCKIIAPYYCELSEKYTSMMFLLVDVDELTDFSTSWD 404
QK+EEA +DGKIV+ANFSA+WCGPC++IAP Y E+S+ Y +MFL +DVD+L DFS++WD
Sbjct: 34 QKIEEANKDGKIVVANFSASWCGPCRVIAPVYAEMSKTYPQLMFLTIDVDDLMDFSSTWD 93
Query: 403 IKATPTFFFLKDGQQLDKLVGANRPELEKKVVAIAD 296
I+ATPTFFFLK+GQQ+DKLVGAN+PELEKKV A+ D
Sbjct: 94 IRATPTFFFLKNGQQIDKLVGANKPELEKKVQALGD 129
>gb|AAO16555.1| thioredoxin h [Leymus chinensis]
Length = 131
Score = 157 bits (396), Expect = 1e-37
Identities = 68/96 (70%), Positives = 86/96 (88%)
Frame = -3
Query: 583 QKLEEAKRDGKIVIANFSATWCGPCKIIAPYYCELSEKYTSMMFLLVDVDELTDFSTSWD 404
QK+EEA +DGKIV+ANFSA+WCGPC++IAP Y E+S+ Y +MFL +DVD+L DFS++WD
Sbjct: 34 QKIEEANKDGKIVVANFSASWCGPCRVIAPVYAEMSKTYPQLMFLTIDVDDLMDFSSTWD 93
Query: 403 IKATPTFFFLKDGQQLDKLVGANRPELEKKVVAIAD 296
I+ATPTFFFLK+GQQ+DKLVGAN+PELEKKV A+ D
Sbjct: 94 IRATPTFFFLKNGQQIDKLVGANKPELEKKVQALGD 129
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 524,755,797
Number of Sequences: 1393205
Number of extensions: 10892205
Number of successful extensions: 35736
Number of sequences better than 10.0: 1052
Number of HSP's better than 10.0 without gapping: 33602
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35276
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 21997688174
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
