Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC015772A_C01 KMC015772A_c01
(723 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_195303.2| putative protein; protein id: At4g35780.1, supp... 131 1e-29
pir||T04683 hypothetical protein F8D20.290 - Arabidopsis thalian... 127 2e-28
ref|NP_568041.1| protein kinase like protein; protein id: At4g38... 115 5e-25
ref|NP_179361.1| putative protein kinase; protein id: At2g17700.... 112 5e-24
dbj|BAC65932.1| P0571D04.18 [Oryza sativa (japonica cultivar-gro... 94 2e-18
>ref|NP_195303.2| putative protein; protein id: At4g35780.1, supported by cDNA:
gi_20260235 [Arabidopsis thaliana]
gi|20260236|gb|AAM13016.1| putative protein [Arabidopsis
thaliana] gi|22136520|gb|AAM91338.1| putative protein
[Arabidopsis thaliana]
Length = 570
Score = 131 bits (329), Expect = 1e-29
Identities = 64/94 (68%), Positives = 76/94 (80%)
Frame = -2
Query: 689 LLTGELPYSYLTPLQAAVGVVQKGLRPSIPKNTHPRLSELLQRCWKQDPIERPAFSEIIE 510
LLTGELPYSYLTPLQAAVGVVQKGLRP IPK THP+L+ELL++CW+QDP RP F+EIIE
Sbjct: 480 LLTGELPYSYLTPLQAAVGVVQKGLRPKIPKETHPKLTELLEKCWQQDPALRPNFAEIIE 539
Query: 509 ILQNIAKEVNDTKTDRHKDKSSHHGFLSTLKRAH 408
+L + +EV D +RHKDK H G+ S LK+ H
Sbjct: 540 MLNQLIREVGD--DERHKDK--HGGYFSGLKKGH 569
>pir||T04683 hypothetical protein F8D20.290 - Arabidopsis thaliana
gi|3367596|emb|CAA20048.1| putative protein [Arabidopsis
thaliana] gi|7270530|emb|CAB81487.1| putative protein
[Arabidopsis thaliana]
Length = 553
Score = 127 bits (318), Expect = 2e-28
Identities = 63/94 (67%), Positives = 74/94 (78%)
Frame = -2
Query: 689 LLTGELPYSYLTPLQAAVGVVQKGLRPSIPKNTHPRLSELLQRCWKQDPIERPAFSEIIE 510
LLTGELPYSYLTPLQAAVGVVQKGLRP IPK THP+L+ELL++CW+QDP RP F+EIIE
Sbjct: 463 LLTGELPYSYLTPLQAAVGVVQKGLRPKIPKETHPKLTELLEKCWQQDPALRPNFAEIIE 522
Query: 509 ILQNIAKEVNDTKTDRHKDKSSHHGFLSTLKRAH 408
+L + +EV D HKDK H G+ S LK+ H
Sbjct: 523 MLNQLIREVIDLSL--HKDK--HGGYFSGLKKGH 552
>ref|NP_568041.1| protein kinase like protein; protein id: At4g38470.1 [Arabidopsis
thaliana]
Length = 575
Score = 115 bits (289), Expect = 5e-25
Identities = 57/94 (60%), Positives = 72/94 (75%), Gaps = 1/94 (1%)
Frame = -2
Query: 689 LLTGELPYSYLTPLQAAVGVVQKGLRPSIPKNTHPRLSELLQRCWKQDPIERPAFSEIIE 510
LLTG+LPY Y+TPLQAAVGVVQKGLRP+IPKNTHP+L+ELL+R W+ D +RP FSEIIE
Sbjct: 478 LLTGKLPYEYMTPLQAAVGVVQKGLRPTIPKNTHPKLAELLERLWEHDSTQRPDFSEIIE 537
Query: 509 ILQNIAKEVNDTKTDRHKDKSS-HHGFLSTLKRA 411
LQ IAKEV + ++ K + G + L+R+
Sbjct: 538 QLQEIAKEVGEEGEEKKKSSTGLGGGIFAALRRS 571
>ref|NP_179361.1| putative protein kinase; protein id: At2g17700.1, supported by
cDNA: gi_17979170, supported by cDNA: gi_20465914
[Arabidopsis thaliana] gi|25411811|pir||D84555 probable
protein kinase [imported] - Arabidopsis thaliana
gi|17979171|gb|AAL49781.1| putative protein kinase
[Arabidopsis thaliana] gi|20465915|gb|AAM20110.1|
putative protein kinase [Arabidopsis thaliana]
Length = 546
Score = 112 bits (280), Expect = 5e-24
Identities = 51/70 (72%), Positives = 60/70 (84%)
Frame = -2
Query: 689 LLTGELPYSYLTPLQAAVGVVQKGLRPSIPKNTHPRLSELLQRCWKQDPIERPAFSEIIE 510
LLTG++PY++LTPLQAAVGVVQKGLRP IPK THP++ LL+RCW QDP +RP F EIIE
Sbjct: 474 LLTGDIPYAFLTPLQAAVGVVQKGLRPKIPKKTHPKVKGLLERCWHQDPEQRPLFEEIIE 533
Query: 509 ILQNIAKEVN 480
+LQ I KEVN
Sbjct: 534 MLQQIMKEVN 543
>dbj|BAC65932.1| P0571D04.18 [Oryza sativa (japonica cultivar-group)]
Length = 719
Score = 94.0 bits (232), Expect = 2e-18
Identities = 45/71 (63%), Positives = 58/71 (81%)
Frame = -2
Query: 689 LLTGELPYSYLTPLQAAVGVVQKGLRPSIPKNTHPRLSELLQRCWKQDPIERPAFSEIIE 510
LLTG+LPY +TPLQAAV VVQK LRP IP +THP L+ LLQ+CW++DP RP FSEI++
Sbjct: 440 LLTGKLPYEDMTPLQAAVAVVQKDLRPIIPADTHPMLAGLLQKCWQKDPALRPTFSEILD 499
Query: 509 ILQNIAKEVND 477
IL +I KE+++
Sbjct: 500 ILNSI-KEISE 509
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 627,059,748
Number of Sequences: 1393205
Number of extensions: 13630388
Number of successful extensions: 40837
Number of sequences better than 10.0: 1583
Number of HSP's better than 10.0 without gapping: 38966
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40745
length of database: 448,689,247
effective HSP length: 120
effective length of database: 281,504,647
effective search space used: 33780557640
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
