Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC015714A_C01 KMC015714A_c01
(568 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAF98554.1|AF153441_1 serine threonine kinase homolog COK-4 [... 75 4e-13
ref|NP_198220.1| receptor-like protein kinase precursor - like; ... 52 4e-06
dbj|BAB56062.1| putative receptor-protein kinase [Oryza sativa (... 50 1e-05
ref|NP_187120.1| putative protein kinase; protein id: At3g04690.... 50 2e-05
dbj|BAA87852.1| unnamed protein product [Oryza sativa (japonica ... 50 3e-05
>gb|AAF98554.1|AF153441_1 serine threonine kinase homolog COK-4 [Phaseolus vulgaris]
Length = 369
Score = 75.5 bits (184), Expect = 4e-13
Identities = 33/59 (55%), Positives = 47/59 (78%)
Frame = -1
Query: 511 IDPALIGIIAPECFTVYIDIIDMCLKDDPNERPTMGEVEVQLEHALALQHEADNANDTS 335
IDP + G IAP+C+ V++D++ CLK +P+ERPT+GEVEVQLEHAL++Q ++D N S
Sbjct: 293 IDPIIKGKIAPDCWQVFVDMMVSCLKYEPDERPTIGEVEVQLEHALSMQEQSDITNSNS 351
>ref|NP_198220.1| receptor-like protein kinase precursor - like; protein id:
At5g28680.1 [Arabidopsis thaliana]
Length = 858
Score = 52.4 bits (124), Expect = 4e-06
Identities = 27/55 (49%), Positives = 32/55 (58%)
Frame = -1
Query: 511 IDPALIGIIAPECFTVYIDIIDMCLKDDPNERPTMGEVEVQLEHALALQHEADNA 347
IDP L G I PEC + D + CL D +RPTMG+V LE AL LQ AD +
Sbjct: 750 IDPNLKGKINPECLKKFADTAEKCLSDSGLDRPTMGDVLWNLEFALQLQETADGS 804
>dbj|BAB56062.1| putative receptor-protein kinase [Oryza sativa (japonica
cultivar-group)] gi|21743317|dbj|BAC03312.1| putative
receptor-protein kinase [Oryza sativa (japonica
cultivar-group)]
Length = 896
Score = 50.4 bits (119), Expect = 1e-05
Identities = 22/55 (40%), Positives = 36/55 (65%)
Frame = -1
Query: 511 IDPALIGIIAPECFTVYIDIIDMCLKDDPNERPTMGEVEVQLEHALALQHEADNA 347
+DP L G IAP+CF + + + C+ D+ +RP+MG+V LE AL +Q A+++
Sbjct: 773 VDPHLKGKIAPQCFKKFAETAEKCVSDEGIDRPSMGDVLWNLEFALQMQESAEDS 827
>ref|NP_187120.1| putative protein kinase; protein id: At3g04690.1 [Arabidopsis
thaliana] gi|6175184|gb|AAF04910.1|AC011437_25 putative
protein kinase [Arabidopsis thaliana]
Length = 850
Score = 50.1 bits (118), Expect = 2e-05
Identities = 27/53 (50%), Positives = 30/53 (55%)
Frame = -1
Query: 511 IDPALIGIIAPECFTVYIDIIDMCLKDDPNERPTMGEVEVQLEHALALQHEAD 353
IDP L G I EC + D + CL D ERPTMG+V LE AL LQ AD
Sbjct: 746 IDPNLKGKINAECLKKFADTAEKCLNDSGLERPTMGDVLWNLEFALQLQETAD 798
>dbj|BAA87852.1| unnamed protein product [Oryza sativa (japonica cultivar-group)]
gi|7106536|dbj|BAA92221.1| unnamed protein product
[Oryza sativa (japonica cultivar-group)]
Length = 898
Score = 49.7 bits (117), Expect = 3e-05
Identities = 24/55 (43%), Positives = 32/55 (57%)
Frame = -1
Query: 511 IDPALIGIIAPECFTVYIDIIDMCLKDDPNERPTMGEVEVQLEHALALQHEADNA 347
+DPA+ IAPEC + D + CL ++ ERPTMG+V LE A+ Q D A
Sbjct: 777 VDPAIRDQIAPECLAKFADTAEKCLSENGTERPTMGDVLWNLESAMHFQDAFDAA 831
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 453,995,220
Number of Sequences: 1393205
Number of extensions: 9229983
Number of successful extensions: 25082
Number of sequences better than 10.0: 156
Number of HSP's better than 10.0 without gapping: 24178
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25064
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 20669577624
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
