Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC015702A_C02 KMC015702A_c02
(678 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P58822|PGI2_PHAVU Polygalacturonase inhibitor 2 precursor (Po... 211 6e-54
gb|AAD45503.1| polygalacturonase inhibitor protein [Glycine max] 211 7e-54
sp|P35334|PGI1_PHAVU Polygalacturonase inhibitor 1 precursor (Po... 209 3e-53
sp|P58823|PGI3_PHAVU Polygalacturonase inhibitor 3 precursor (Po... 205 5e-52
gb|AAM94616.2| polygalacturonase inhibitor protein [Glycine max] 187 1e-46
>sp|P58822|PGI2_PHAVU Polygalacturonase inhibitor 2 precursor
(Polygalacturonase-inhibiting protein) (PGIP-2)
Length = 342
Score = 211 bits (538), Expect = 6e-54
Identities = 102/132 (77%), Positives = 117/132 (88%)
Frame = -2
Query: 677 LNRNQLSGKIPASLSKLNLAFVDLSMNMLEGDASVFFGSKKNTQKIILARNSLAFDLGKV 498
++RN+L+GKIP + + LNLAFVDLS NMLEGDASV FGS KNTQKI LA+NSLAFDLGKV
Sbjct: 210 ISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKV 269
Query: 497 GLSSNLNTIDLRNNRVYGKLPQELTGLKFLKKLNVSYHSLCGQIPQGGNLQRFDVYSYAH 318
GLS NLN +DLRNNR+YG LPQ LT LKFL LNVS+++LCG+IPQGGNLQRFDV +YA+
Sbjct: 270 GLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYAN 329
Query: 317 NKCLCGSPLPAC 282
NKCLCGSPLPAC
Sbjct: 330 NKCLCGSPLPAC 341
>gb|AAD45503.1| polygalacturonase inhibitor protein [Glycine max]
Length = 313
Score = 211 bits (537), Expect = 7e-54
Identities = 99/132 (75%), Positives = 117/132 (88%)
Frame = -2
Query: 677 LNRNQLSGKIPASLSKLNLAFVDLSMNMLEGDASVFFGSKKNTQKIILARNSLAFDLGKV 498
++RN+L+GKIPA+ + LNLAFVDLS NMLEGDASV FG++KNTQKI+LA+N LAFDLGKV
Sbjct: 181 ISRNRLTGKIPATFANLNLAFVDLSRNMLEGDASVLFGTEKNTQKILLAKNMLAFDLGKV 240
Query: 497 GLSSNLNTIDLRNNRVYGKLPQELTGLKFLKKLNVSYHSLCGQIPQGGNLQRFDVYSYAH 318
GLS NLN +DLRNNR+YG LPQ LT LKFL NVS++ LCG+IPQGGN+QRFDV SYA+
Sbjct: 241 GLSKNLNGLDLRNNRIYGTLPQGLTALKFLHSFNVSFNDLCGEIPQGGNMQRFDVSSYAN 300
Query: 317 NKCLCGSPLPAC 282
NKCLCGSPLP+C
Sbjct: 301 NKCLCGSPLPSC 312
>sp|P35334|PGI1_PHAVU Polygalacturonase inhibitor 1 precursor
(Polygalacturonase-inhibiting protein) (PGIP-1)
gi|478677|pir||S23764 polygalacturanase-inhibiting
protein precursor - kidney bean gi|21029|emb|CAA46016.1|
polygalacturanase-inhibiting protein [Phaseolus
vulgaris]
Length = 342
Score = 209 bits (532), Expect = 3e-53
Identities = 100/132 (75%), Positives = 118/132 (88%)
Frame = -2
Query: 677 LNRNQLSGKIPASLSKLNLAFVDLSMNMLEGDASVFFGSKKNTQKIILARNSLAFDLGKV 498
++RN+L+GKIP + + LNLAFVDLS NMLEGDASV FGS KNT+KI LA+NSLAFDLGKV
Sbjct: 210 ISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTKKIHLAKNSLAFDLGKV 269
Query: 497 GLSSNLNTIDLRNNRVYGKLPQELTGLKFLKKLNVSYHSLCGQIPQGGNLQRFDVYSYAH 318
GLS NLN +DLRNNR+YG LPQ LT LKFL+ LNVS+++LCG+IPQGGNL+RFDV SYA+
Sbjct: 270 GLSKNLNGLDLRNNRIYGTLPQGLTQLKFLQSLNVSFNNLCGEIPQGGNLKRFDVSSYAN 329
Query: 317 NKCLCGSPLPAC 282
NKCLCGSPLP+C
Sbjct: 330 NKCLCGSPLPSC 341
>sp|P58823|PGI3_PHAVU Polygalacturonase inhibitor 3 precursor
(Polygalacturonase-inhibiting protein) (PGIP-2) (PGIP-3)
Length = 342
Score = 205 bits (521), Expect = 5e-52
Identities = 99/132 (75%), Positives = 115/132 (87%)
Frame = -2
Query: 677 LNRNQLSGKIPASLSKLNLAFVDLSMNMLEGDASVFFGSKKNTQKIILARNSLAFDLGKV 498
++RN+L+GKIP + + LNLAFVDLS NML+GDASV FGS KNTQKI LA+NSL FDL KV
Sbjct: 210 ISRNRLTGKIPPTFANLNLAFVDLSRNMLQGDASVLFGSDKNTQKIHLAKNSLDFDLEKV 269
Query: 497 GLSSNLNTIDLRNNRVYGKLPQELTGLKFLKKLNVSYHSLCGQIPQGGNLQRFDVYSYAH 318
GLS NLN +DLRNNR+YG LPQ LT LKFL LNVS+++LCG+IPQGGNLQRFDV +YA+
Sbjct: 270 GLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYAN 329
Query: 317 NKCLCGSPLPAC 282
NKCLCGSPLPAC
Sbjct: 330 NKCLCGSPLPAC 341
>gb|AAM94616.2| polygalacturonase inhibitor protein [Glycine max]
Length = 333
Score = 187 bits (475), Expect = 1e-46
Identities = 93/132 (70%), Positives = 110/132 (82%)
Frame = -2
Query: 677 LNRNQLSGKIPASLSKLNLAFVDLSMNMLEGDASVFFGSKKNTQKIILARNSLAFDLGKV 498
L+RN+L+GKIPA+L+KLNL F+DLS NMLEGDASV FGS+K+T +I L +N+LAFDLGKV
Sbjct: 198 LSRNRLTGKIPATLAKLNLRFLDLSRNMLEGDASVLFGSEKDTVQINLGKNNLAFDLGKV 257
Query: 497 GLSSNLNTIDLRNNRVYGKLPQELTGLKFLKKLNVSYHSLCGQIPQGGNLQRFDVYSYAH 318
S L +DLR+NR+YG LPQ LT LK L KLNVS ++LCG+IPQGGNLQR V SYAH
Sbjct: 258 EFSEILAILDLRHNRIYGTLPQGLTALKHLTKLNVSNNNLCGEIPQGGNLQRIKVNSYAH 317
Query: 317 NKCLCGSPLPAC 282
NKCLCGS LPAC
Sbjct: 318 NKCLCGSXLPAC 329
Score = 32.7 bits (73), Expect = 4.7
Identities = 14/42 (33%), Positives = 26/42 (61%)
Frame = -2
Query: 488 SNLNTIDLRNNRVYGKLPQELTGLKFLKKLNVSYHSLCGQIP 363
+NLN +++ V G +P L+ +K L ++ SY++L G +P
Sbjct: 118 TNLNYLNITYTNVSGTIPDFLSHIKTLVSIDFSYNNLSGNLP 159
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 603,588,909
Number of Sequences: 1393205
Number of extensions: 13211360
Number of successful extensions: 38213
Number of sequences better than 10.0: 1004
Number of HSP's better than 10.0 without gapping: 32547
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36392
length of database: 448,689,247
effective HSP length: 119
effective length of database: 282,897,852
effective search space used: 29987172312
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
