>KMC015676A_C01 KMC015676A_c01
aatcatttcatttagtaattcatgttacctatcaacagaaatccaaattgaccatataat
acaacaaaatacagatgctaAATTGCTAATATGAAGCAAATCTAGCAACCTGAAAAATGC
CTCAATCACAGCATGACAGACCCAAACAAAGAAATTTCTGCAAAAACAAACCTTAAGAAC
AAATAGAATCAACGGTCAACCGGTCATTTTATTCAAGGATCAGTGCAGATAAACCAACTA
ACCAAGCAACTTCACTCGGGGTCTGTGTATATATATTATTATGAATATTTCCTACATCTT
TCATGTGTGAAAGGTAAACAATAAAAATGATTCATCGGAACTAATTAACGCACCAGATTG
CAATCCTTCTAAAATTGATTCTAGAGCCAAAATCAATTGAGTAAAAGCTTCCCTGAGTAG
CTTCTACGTGTCAGAATTGATTCCGCGAAAACTGAAGCTGATTCAAACTCAGCAAGACAC
CCAATTCTTGTGAGTGCTGATGAGAGCAGACAAAAGCCCTGCAGAAGAAAGCAAAATCGG
CTTCGAAAACGGTGCTTTCCCATCCAATATATCATCCAAAGCCATCAATCCATCAGCCAA
ATCCTGAACAACTGAAAGCTGCTTCATCAGTTTCTTCTCCCTCAACTTCCCCAATTTCCC
TTCTTCTTCTCCACACCCAAnccctc

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KMC015676A_C01 KMC015676A_c01
         (686 letters)

Database: nr 
           1,393,205 sequences; 448,689,247 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAM60843.1| unknown [Arabidopsis thaliana]                          89  7e-17
ref|NP_564514.1| expressed protein; protein id: At1g47750.1, sup...    89  7e-17
ref|NP_499472.1| Sterol regulatory element binding like (125.2 k...    33  3.7
ref|NP_579668.1| neopullulanase (alpha-amylase II) [Pyrococcus f...    33  3.7
dbj|BAA82563.1| sPTPN2 [Ephydatia fluviatilis]                         33  4.8

>gb|AAM60843.1| unknown [Arabidopsis thaliana]
          Length = 248

 Score = 88.6 bits (218), Expect = 7e-17
 Identities = 40/71 (56%), Positives = 53/71 (74%)
 Frame = -3

Query: 684 GXGCGEEEGKLGKLREKKLMKQLSVVQDLADGLMALDDILDGKAPFSKPILLSSAGLLSA 505
           G  C  E+ K+  ++EKK +K LS++QDLADGLM + DI DGK   S P ++SSAGL SA
Sbjct: 178 GLACDGEDEKMKMIKEKKTLKVLSILQDLADGLMTIADIRDGKGVLSAPNVISSAGLFSA 237

Query: 504 LISTHKNWVSC 472
           ++STHKNW+SC
Sbjct: 238 IVSTHKNWISC 248

>ref|NP_564514.1| expressed protein; protein id: At1g47750.1, supported by cDNA:
           1012. [Arabidopsis thaliana] gi|25405892|pir||B96518
           protein T2E6.18 [imported] - Arabidopsis thaliana
           gi|9802590|gb|AAF99792.1|AC012463_9 T2E6.18 [Arabidopsis
           thaliana]
          Length = 248

 Score = 88.6 bits (218), Expect = 7e-17
 Identities = 40/71 (56%), Positives = 53/71 (74%)
 Frame = -3

Query: 684 GXGCGEEEGKLGKLREKKLMKQLSVVQDLADGLMALDDILDGKAPFSKPILLSSAGLLSA 505
           G  C  E+ K+  ++EKK +K LS++QDLADGLM + DI DGK   S P ++SSAGL SA
Sbjct: 178 GLACDGEDEKMKMIKEKKTLKVLSILQDLADGLMTIADIRDGKGVLSAPNVISSAGLFSA 237

Query: 504 LISTHKNWVSC 472
           ++STHKNW+SC
Sbjct: 238 IVSTHKNWISC 248

>ref|NP_499472.1| Sterol regulatory element binding like (125.2 kD) [Caenorhabditis
           elegans] gi|7509933|pir||T26954 hypothetical protein
           Y47D3B.7 - Caenorhabditis elegans
           gi|3881008|emb|CAA21042.1| Hypothetical protein Y47D3B.7
           [Caenorhabditis elegans]
          Length = 1113

 Score = 33.1 bits (74), Expect = 3.7
 Identities = 15/35 (42%), Positives = 21/35 (59%)
 Frame = +3

Query: 561 HPIYHPKPSIHQPNPEQLKAASSVSSPSTSPISLL 665
           H  +HP P IH+ NPEQ+ + S   +P T P  L+
Sbjct: 231 HHHHHPMPKIHE-NPEQVASPSIEDAPETKPTHLV 264

>ref|NP_579668.1| neopullulanase (alpha-amylase II) [Pyrococcus furiosus DSM 3638]
           gi|18894139|gb|AAL82063.1| neopullulanase (alpha-amylase
           II) [Pyrococcus furiosus DSM 3638]
          Length = 645

 Score = 33.1 bits (74), Expect = 3.7
 Identities = 16/36 (44%), Positives = 20/36 (55%)
 Frame = +3

Query: 60  YNKIQMLNC*YEANLAT*KMPQSQHDRPKQRNFCKN 167
           Y KI+ L   YE+  +   MP+  HD PK R F KN
Sbjct: 360 YKKIKSLGWNYESFFSVWIMPRLNHDNPKVREFIKN 395

>dbj|BAA82563.1| sPTPN2 [Ephydatia fluviatilis]
          Length = 837

 Score = 32.7 bits (73), Expect = 4.8
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = +3

Query: 558 SHPIYHPKPSIHQPNPEQLKAASSVSSPSTSPIS 659
           S  + HP P+   P PE   A++ +SSP  SP S
Sbjct: 237 SETLLHPSPAPMSPPPENSSASALISSPGASPTS 270

  Database: nr
    Posted date:  Apr 1, 2003  2:05 AM
  Number of letters in database: 448,689,247
  Number of sequences in database:  1,393,205
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 543,390,471
Number of Sequences: 1393205
Number of extensions: 11121653
Number of successful extensions: 31978
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 30341
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31920
length of database: 448,689,247
effective HSP length: 119
effective length of database: 282,897,852
effective search space used: 30835865868
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

EST assemble image

clone accession position 1 MWM136g05_f AV766874 1 442 2 MF091d11_f BP033070 195 686

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