Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC015671A_C01 KMC015671A_c01
(802 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||G96729 hypothetical protein F5A18.25 [imported] - Arabidops... 305 5e-82
ref|NP_564991.1| expressed protein; protein id: At1g70570.1, sup... 305 5e-82
ref|NP_440813.1| unknown protein [Synechocystis sp. PCC 6803] gi... 49 1e-04
ref|NP_626403.1| phosphoribosylanthranilate transferase [Strepto... 46 7e-04
ref|ZP_00117964.1| hypothetical protein [Cytophaga hutchinsonii] 45 0.002
>pir||G96729 hypothetical protein F5A18.25 [imported] - Arabidopsis thaliana
gi|12324765|gb|AAG52347.1|AC011663_26 hypothetical
protein; 95675-92527 [Arabidopsis thaliana]
gi|12325051|gb|AAG52478.1|AC010796_17 hypothetical
protein; 58827-61975 [Arabidopsis thaliana]
Length = 552
Score = 305 bits (781), Expect = 5e-82
Identities = 148/205 (72%), Positives = 181/205 (88%)
Frame = +2
Query: 2 YSLNKIREHIKKRPPLATTEKVQQYVKASGKEAIVAGFYHEGYDESLLMLMKRRGVHSGL 181
YSL ++REHIKKRPPLATTEKVQQ+V+A+GKEAIVAGFYHEGY+E LLMLM+RRGVHSGL
Sbjct: 347 YSLIEMREHIKKRPPLATTEKVQQFVRATGKEAIVAGFYHEGYEEPLLMLMRRRGVHSGL 406
Query: 182 VVKGEEGALSMTTRSRSGNTTKGLPVNYCSGFRSLNTSSTSEPGGVTRQGFSLKVKAKDY 361
VVKGEEGALSMTTR R+ + +KG PVNYCSGFRSL++ + E GV+RQ F+L+V A++Y
Sbjct: 407 VVKGEEGALSMTTRVRAASASKGFPVNYCSGFRSLSSDTALEADGVSRQSFNLEVDARNY 466
Query: 362 GFKPTDTPRTDRSIAKNIVYGLEALWGKKGPAYDRIVLNAGMVDHLLGVDGAEDVSAALD 541
GF+PT+TPRTDRS++KNI GL AL G+KG AYDRIVLNAG+VDHLLG +GAEDV+ A++
Sbjct: 467 GFEPTETPRTDRSVSKNIELGLAALRGEKGAAYDRIVLNAGIVDHLLGSEGAEDVAVAME 526
Query: 542 RAREAIDSGNALKRLLTYIKASHRV 616
RA+EAIDSG ALK+LL YI+ S ++
Sbjct: 527 RAKEAIDSGKALKKLLNYIEISRKI 551
>ref|NP_564991.1| expressed protein; protein id: At1g70570.1, supported by cDNA:
gi_13430747, supported by cDNA: gi_15293216 [Arabidopsis
thaliana] gi|13430748|gb|AAK25996.1|AF360286_1 unknown
protein [Arabidopsis thaliana] gi|15293217|gb|AAK93719.1|
unknown protein [Arabidopsis thaliana]
Length = 595
Score = 305 bits (781), Expect = 5e-82
Identities = 148/205 (72%), Positives = 181/205 (88%)
Frame = +2
Query: 2 YSLNKIREHIKKRPPLATTEKVQQYVKASGKEAIVAGFYHEGYDESLLMLMKRRGVHSGL 181
YSL ++REHIKKRPPLATTEKVQQ+V+A+GKEAIVAGFYHEGY+E LLMLM+RRGVHSGL
Sbjct: 390 YSLIEMREHIKKRPPLATTEKVQQFVRATGKEAIVAGFYHEGYEEPLLMLMRRRGVHSGL 449
Query: 182 VVKGEEGALSMTTRSRSGNTTKGLPVNYCSGFRSLNTSSTSEPGGVTRQGFSLKVKAKDY 361
VVKGEEGALSMTTR R+ + +KG PVNYCSGFRSL++ + E GV+RQ F+L+V A++Y
Sbjct: 450 VVKGEEGALSMTTRVRAASASKGFPVNYCSGFRSLSSDTALEADGVSRQSFNLEVDARNY 509
Query: 362 GFKPTDTPRTDRSIAKNIVYGLEALWGKKGPAYDRIVLNAGMVDHLLGVDGAEDVSAALD 541
GF+PT+TPRTDRS++KNI GL AL G+KG AYDRIVLNAG+VDHLLG +GAEDV+ A++
Sbjct: 510 GFEPTETPRTDRSVSKNIELGLAALRGEKGAAYDRIVLNAGIVDHLLGSEGAEDVAVAME 569
Query: 542 RAREAIDSGNALKRLLTYIKASHRV 616
RA+EAIDSG ALK+LL YI+ S ++
Sbjct: 570 RAKEAIDSGKALKKLLNYIEISRKI 594
>ref|NP_440813.1| unknown protein [Synechocystis sp. PCC 6803]
gi|1652572|dbj|BAA17493.1| ORF_ID:sll1634~unknown
protein [Synechocystis sp. PCC 6803]
Length = 349
Score = 48.5 bits (114), Expect = 1e-04
Identities = 27/65 (41%), Positives = 37/65 (56%)
Frame = +2
Query: 20 REHIKKRPPLATTEKVQQYVKASGKEAIVAGFYHEGYDESLLMLMKRRGVHSGLVVKGEE 199
RE I KRPPLAT E + +V +GK +VAGF H + + + RGV + VKG E
Sbjct: 178 REEIGKRPPLATLELI--WVPYAGKHHVVAGFVHPPTENMIAEALSLRGVSTFTTVKGLE 235
Query: 200 GALSM 214
G+ +
Sbjct: 236 GSCDL 240
>ref|NP_626403.1| phosphoribosylanthranilate transferase [Streptomyces coelicolor
A3(2)] gi|8479075|sp|O68608|TRD1_STRCO Anthranilate
phosphoribosyltransferase 1 gi|7480323|pir||T35529
anthranilate phosphoribosyltransferase (EC 2.4.2.18) -
Streptomyces coelicolor gi|3169549|gb|AAC17870.1|
phosphoribosylanthranilate transferase [Streptomyces
coelicolor A3(2)] gi|4539216|emb|CAB39874.1|
phosphoribosylanthranilate transferase [Streptomyces
coelicolor A3(2)]
Length = 354
Score = 45.8 bits (107), Expect = 7e-04
Identities = 48/153 (31%), Positives = 69/153 (44%), Gaps = 6/153 (3%)
Frame = +2
Query: 170 HSGLVVKGEEGALSMTTRSRSGNTTKGLPVNYCSGFRSLNTSSTSEPGGVTRQGFSLKVK 349
HS LV +G++G +TT S S G VT + F
Sbjct: 226 HSSLVFRGDDGLDELTTTSTS-------------------RVWVVRDGRVTEETFD---- 262
Query: 350 AKDYGFK--PTDTPR-TDRSIAKNIVYGLEALWGKKGPAYDRIVLN-AGMVDHLLGVDGA 517
+D G + P + R D S ++ L A G+KGP D ++LN A ++ L +GA
Sbjct: 263 PRDVGIELVPVEALRGADASYNADVARRLLA--GEKGPVRDAVLLNSAAALEALEPGEGA 320
Query: 518 --EDVSAALDRAREAIDSGNALKRLLTYIKASH 610
E + A +DRA EAIDSG A + L ++ SH
Sbjct: 321 LAERLRAGMDRAAEAIDSGAARRVLERWVAVSH 353
>ref|ZP_00117964.1| hypothetical protein [Cytophaga hutchinsonii]
Length = 432
Score = 44.7 bits (104), Expect = 0.002
Identities = 26/69 (37%), Positives = 39/69 (55%), Gaps = 1/69 (1%)
Frame = +2
Query: 2 YSLNKIREHIKKRPPLATTEKVQQYVKASGKEAIVAGFYHEGY-DESLLMLMKRRGVHSG 178
Y L +R+ + KRP LAT EK+ Q V+A ++ GF H Y E L ++ + +
Sbjct: 257 YRLKTVRKEMVKRPFLATFEKMMQPVQAINGNHLLTGFTHAHYRTEVAEQLKAQQKIAAA 316
Query: 179 LVVKGEEGA 205
LV+KG EG+
Sbjct: 317 LVIKGMEGS 325
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 662,857,790
Number of Sequences: 1393205
Number of extensions: 14276587
Number of successful extensions: 36176
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 34821
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36153
length of database: 448,689,247
effective HSP length: 121
effective length of database: 280,111,442
effective search space used: 40616159090
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
