Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC015665A_C02 KMC015665A_c02
(646 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAB88638.2| unknown protein [Arabidopsis thaliana] 155 6e-37
dbj|BAC42505.1| unknown protein [Arabidopsis thaliana] 155 6e-37
gb|AAO37153.1| hypothetical protein [Arabidopsis thaliana] 155 6e-37
gb|AAO37154.1| hypothetical protein [Arabidopsis thaliana] 155 6e-37
ref|NP_191360.1| putative protein; protein id: At3g58010.1, supp... 150 1e-35
>gb|AAB88638.2| unknown protein [Arabidopsis thaliana]
Length = 299
Score = 155 bits (391), Expect = 6e-37
Identities = 76/111 (68%), Positives = 95/111 (85%)
Frame = -2
Query: 645 IILSTKLSVEGPLRMKEEYVEGVLVSPTVIEERVPEQIKGALGQALNALQQLPVPIRNAV 466
IILS+KL+VEGPLR+KEEYVEG+L +PTVIEE VPEQ+K ALGQA LQQLP I++ +
Sbjct: 184 IILSSKLTVEGPLRLKEEYVEGMLETPTVIEEAVPEQLKSALGQAATTLQQLPALIKDTL 243
Query: 465 ASGLKVPLSGSIQRLFMISYLDEEILIIRDTAGMPEVLTRLDASPSSIGES 313
ASGL++PLSGS +R FMISYLDEEILI+RDT G+PEVLTR++ S++ E+
Sbjct: 244 ASGLRIPLSGSFERFFMISYLDEEILIVRDTEGVPEVLTRIETPSSTVVET 294
>dbj|BAC42505.1| unknown protein [Arabidopsis thaliana]
Length = 141
Score = 155 bits (391), Expect = 6e-37
Identities = 76/111 (68%), Positives = 95/111 (85%)
Frame = -2
Query: 645 IILSTKLSVEGPLRMKEEYVEGVLVSPTVIEERVPEQIKGALGQALNALQQLPVPIRNAV 466
IILS+KL+VEGPLR+KEEYVEG+L +PTVIEE VPEQ+K ALGQA LQQLP I++ +
Sbjct: 26 IILSSKLTVEGPLRLKEEYVEGMLETPTVIEEAVPEQLKSALGQAATTLQQLPALIKDTL 85
Query: 465 ASGLKVPLSGSIQRLFMISYLDEEILIIRDTAGMPEVLTRLDASPSSIGES 313
ASGL++PLSGS +R FMISYLDEEILI+RDT G+PEVLTR++ S++ E+
Sbjct: 86 ASGLRIPLSGSFERFFMISYLDEEILIVRDTEGVPEVLTRIETPSSTVVET 136
>gb|AAO37153.1| hypothetical protein [Arabidopsis thaliana]
Length = 250
Score = 155 bits (391), Expect = 6e-37
Identities = 76/111 (68%), Positives = 95/111 (85%)
Frame = -2
Query: 645 IILSTKLSVEGPLRMKEEYVEGVLVSPTVIEERVPEQIKGALGQALNALQQLPVPIRNAV 466
IILS+KL+VEGPLR+KEEYVEG+L +PTVIEE VPEQ+K ALGQA LQQLP I++ +
Sbjct: 135 IILSSKLTVEGPLRLKEEYVEGMLETPTVIEEAVPEQLKSALGQAATTLQQLPALIKDTL 194
Query: 465 ASGLKVPLSGSIQRLFMISYLDEEILIIRDTAGMPEVLTRLDASPSSIGES 313
ASGL++PLSGS +R FMISYLDEEILI+RDT G+PEVLTR++ S++ E+
Sbjct: 195 ASGLRIPLSGSFERFFMISYLDEEILIVRDTEGVPEVLTRIETPSSTVVET 245
>gb|AAO37154.1| hypothetical protein [Arabidopsis thaliana]
Length = 271
Score = 155 bits (391), Expect = 6e-37
Identities = 76/111 (68%), Positives = 95/111 (85%)
Frame = -2
Query: 645 IILSTKLSVEGPLRMKEEYVEGVLVSPTVIEERVPEQIKGALGQALNALQQLPVPIRNAV 466
IILS+KL+VEGPLR+KEEYVEG+L +PTVIEE VPEQ+K ALGQA LQQLP I++ +
Sbjct: 156 IILSSKLTVEGPLRLKEEYVEGMLETPTVIEEAVPEQLKSALGQAATTLQQLPALIKDTL 215
Query: 465 ASGLKVPLSGSIQRLFMISYLDEEILIIRDTAGMPEVLTRLDASPSSIGES 313
ASGL++PLSGS +R FMISYLDEEILI+RDT G+PEVLTR++ S++ E+
Sbjct: 216 ASGLRIPLSGSFERFFMISYLDEEILIVRDTEGVPEVLTRIETPSSTVVET 266
>ref|NP_191360.1| putative protein; protein id: At3g58010.1, supported by cDNA: 1979.
[Arabidopsis thaliana] gi|11357956|pir||T46023
hypothetical protein T10K17.220 - Arabidopsis thaliana
gi|6729544|emb|CAB67629.1| putative protein [Arabidopsis
thaliana] gi|21554063|gb|AAM63144.1| unknown
[Arabidopsis thaliana] gi|22135958|gb|AAM91561.1|
putative protein [Arabidopsis thaliana]
gi|24899829|gb|AAN65129.1| putative protein [Arabidopsis
thaliana]
Length = 308
Score = 150 bits (379), Expect = 1e-35
Identities = 71/104 (68%), Positives = 91/104 (87%)
Frame = -2
Query: 645 IILSTKLSVEGPLRMKEEYVEGVLVSPTVIEERVPEQIKGALGQALNALQQLPVPIRNAV 466
I LS+KL++EGPLRMKEEY+EG+L SPTVIEE VP+Q++G LGQA LQQLP PI++ +
Sbjct: 189 ITLSSKLTIEGPLRMKEEYLEGLLESPTVIEEAVPDQLRGLLGQATTTLQQLPEPIKDTL 248
Query: 465 ASGLKVPLSGSIQRLFMISYLDEEILIIRDTAGMPEVLTRLDAS 334
A+GL++PL G+ QR FMISYLD+EILI+RDTAG+PEVLTR++ S
Sbjct: 249 ANGLRIPLGGTYQRFFMISYLDDEILIVRDTAGVPEVLTRVETS 292
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 545,588,144
Number of Sequences: 1393205
Number of extensions: 11524087
Number of successful extensions: 30112
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 29154
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30085
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 27291941472
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
