Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC015634A_C01 KMC015634A_c01
(582 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAL38258.1| dnaJ-like protein [Arabidopsis thaliana] gi|27311... 137 1e-31
ref|NP_191293.1| dnaJ-like protein; protein id: At3g57340.1, sup... 137 1e-31
ref|NP_196194.1| DnaJ-like protein; protein id: At5g05750.1, sup... 131 7e-30
dbj|BAB89081.1| dnaJ-like protein [Oryza sativa (japonica cultiv... 106 2e-22
ref|NP_199717.1| DNAJ-like protein; protein id: At5g49060.1 [Ara... 87 1e-16
>gb|AAL38258.1| dnaJ-like protein [Arabidopsis thaliana] gi|27311873|gb|AAO00902.1|
dnaJ-like protein [Arabidopsis thaliana]
Length = 367
Score = 137 bits (345), Expect = 1e-31
Identities = 71/132 (53%), Positives = 95/132 (71%), Gaps = 4/132 (3%)
Frame = +1
Query: 166 MDGNKDDALKCFRIAKEALESGDRSRALKFVSKARRLDPTLPVDDLLTAIGGG----GGA 333
MDGNKDDALKC +I K A+E+GDR RALKF++KARRLDP LP+DDL++ + G+
Sbjct: 1 MDGNKDDALKCLKICKSAMEAGDRPRALKFLAKARRLDPNLPIDDLVSELNNNKSDEPGS 60
Query: 334 GDNPTEAAAEPGKPAADNPSVRRRSSASAAAAPVPPSSSSSSSASYTTEQVSIIREIKRK 513
+P AAA+ ++D PS+R+R S+ ++SSSSS SYT EQ+SI+R+IK K
Sbjct: 61 AKSPGSAAAKDSSNSSDRPSLRQRGSS---------TTSSSSSMSYTEEQISIVRKIKSK 111
Query: 514 KNYYEILGLEKS 549
K+YYEILGLE +
Sbjct: 112 KDYYEILGLESN 123
>ref|NP_191293.1| dnaJ-like protein; protein id: At3g57340.1, supported by cDNA:
120719., supported by cDNA: gi_17473564 [Arabidopsis
thaliana] gi|11357271|pir||T45812 dnaJ-like protein -
Arabidopsis thaliana gi|6735313|emb|CAB68140.1|
dnaJ-like protein [Arabidopsis thaliana]
Length = 367
Score = 137 bits (345), Expect = 1e-31
Identities = 71/132 (53%), Positives = 95/132 (71%), Gaps = 4/132 (3%)
Frame = +1
Query: 166 MDGNKDDALKCFRIAKEALESGDRSRALKFVSKARRLDPTLPVDDLLTAIGGG----GGA 333
MDGNKDDALKC +I K A+E+GDR RALKF++KARRLDP LP+DDL++ + G+
Sbjct: 1 MDGNKDDALKCLKICKSAMEAGDRPRALKFLAKARRLDPNLPIDDLVSELNNNKSDEPGS 60
Query: 334 GDNPTEAAAEPGKPAADNPSVRRRSSASAAAAPVPPSSSSSSSASYTTEQVSIIREIKRK 513
+P AAA+ ++D PS+R+R S+ ++SSSSS SYT EQ+SI+R+IK K
Sbjct: 61 AKSPGSAAAKDSSNSSDRPSLRQRGSS---------TTSSSSSMSYTEEQISIVRKIKSK 111
Query: 514 KNYYEILGLEKS 549
K+YYEILGLE +
Sbjct: 112 KDYYEILGLESN 123
>ref|NP_196194.1| DnaJ-like protein; protein id: At5g05750.1, supported by cDNA:
gi_15810414, supported by cDNA: gi_20258918 [Arabidopsis
thaliana] gi|9759100|dbj|BAB09669.1| DnaJ-like protein
[Arabidopsis thaliana] gi|15810415|gb|AAL07095.1|
putative DnaJ protein [Arabidopsis thaliana]
gi|20258919|gb|AAM14153.1| putative DnaJ protein
[Arabidopsis thaliana]
Length = 294
Score = 131 bits (329), Expect = 7e-30
Identities = 73/132 (55%), Positives = 94/132 (70%), Gaps = 4/132 (3%)
Frame = +1
Query: 166 MDGNKDDALKCFRIAKEALESGDRSRALKFVSKARRLDPTLPVDDLLTAI----GGGGGA 333
MDGNKDDALKC +I K+A+E+GDRSRALKF+ KARRLDP LP+D L++ +
Sbjct: 1 MDGNKDDALKCLKIGKDAIEAGDRSRALKFLEKARRLDPNLPIDGLVSDLKKQSDEPAAE 60
Query: 334 GDNPTEAAAEPGKPAADNPSVRRRSSASAAAAPVPPSSSSSSSASYTTEQVSIIREIKRK 513
D+P AA E KP +D PS+R+R S+S+AA SSSS+S T EQ +I+REIK K
Sbjct: 61 EDSPGSAANESSKP-SDRPSLRQRGSSSSAA-------GSSSSSSSTEEQRTIVREIKSK 112
Query: 514 KNYYEILGLEKS 549
K+YYEILGL+ +
Sbjct: 113 KDYYEILGLKSN 124
>dbj|BAB89081.1| dnaJ-like protein [Oryza sativa (japonica cultivar-group)]
Length = 380
Score = 106 bits (264), Expect = 2e-22
Identities = 59/143 (41%), Positives = 87/143 (60%), Gaps = 16/143 (11%)
Frame = +1
Query: 166 MDGNKDDALKCFRIAKEALESGDRSRALKFVSKARRLDPTLPVDDLLTAIGGGGGAGDNP 345
M+GNKDDA+KC RI K A ++GD +RA+KF+SKA+RLDP+LP+D LL + D+P
Sbjct: 1 MEGNKDDAVKCLRIGKAAADAGDSARAVKFLSKAKRLDPSLPIDHLLDPLLN----QDDP 56
Query: 346 TEAAAEPGKPAADNPSVRRRSSASAAAAPVPPS---------------SSSSSSASYTTE 480
++A P A P R S+A+A+A S S+ SYT+E
Sbjct: 57 PSSSASSSSPQAPPPPPPRSSAAAASAEEATGSDGLRERKQKGKKKEEDESAGERSYTSE 116
Query: 481 QVSIIREIKR-KKNYYEILGLEK 546
Q+ ++R++K+ ++YY+ILGLEK
Sbjct: 117 QLEVVRQVKKHTRDYYQILGLEK 139
>ref|NP_199717.1| DNAJ-like protein; protein id: At5g49060.1 [Arabidopsis thaliana]
gi|10176939|dbj|BAB10088.1| DNAJ-like protein
[Arabidopsis thaliana]
Length = 350
Score = 87.4 bits (215), Expect = 1e-16
Identities = 53/131 (40%), Positives = 71/131 (53%), Gaps = 3/131 (2%)
Frame = +1
Query: 166 MDGNKDDALKCFRIAKEALESGDRSRALKFVSKARRLDPTLPVDDLLTAIGGGGGAGDNP 345
MDGNKDDA +C RIA++A+ SGD+ RALKF++ A+RL+P+L VD+L+
Sbjct: 1 MDGNKDDASRCLRIAEDAIVSGDKERALKFINMAKRLNPSLSVDELVA------------ 48
Query: 346 TEAAAEPGKPAADN-PSVRRRSSASAAAAPVPPSSS--SSSSASYTTEQVSIIREIKRKK 516
A DN SV R SS S + + YT E V ++R I R
Sbjct: 49 ----------ACDNLDSVSRNSSVSEKLKTMDGDDDKLETGKMKYTEENVDLVRNIIRNN 98
Query: 517 NYYEILGLEKS 549
+YY ILGLEK+
Sbjct: 99 DYYAILGLEKN 109
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.312 0.129 0.364
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 514,699,730
Number of Sequences: 1393205
Number of extensions: 12374616
Number of successful extensions: 107380
Number of sequences better than 10.0: 695
Number of HSP's better than 10.0 without gapping: 67765
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 97630
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 21712003912
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
