Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC015487A_C01 KMC015487A_c01
(816 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T07871 miraculin homolog, root-knot nematode-induced - toma... 74 3e-12
pir||T03803 tumor-related protein, clone NF34 - common tobacco g... 72 7e-12
dbj|BAA05474.1| tumor-related protein [Nicotiana glauca x Nicoti... 70 5e-11
dbj|BAA82843.1| miraculin homologue [Solanum melongena] 70 5e-11
sp|P16348|APIB_SOLTU Aspartic protease inhibitor 11 (Cathepsin D... 65 1e-09
>pir||T07871 miraculin homolog, root-knot nematode-induced - tomato
gi|2654440|gb|AAC63057.1| Lemir [Lycopersicon
esculentum]
Length = 205
Score = 73.6 bits (179), Expect = 3e-12
Identities = 38/130 (29%), Positives = 64/130 (49%)
Frame = -3
Query: 814 ENTDLPEGFPVKFTPFAKGDKYVKLGKDFTVVFSAATTCVQSTAWSVGSTEAKSGRRLVV 635
E+ ++ +G P+ FTP ++ D ++FSA + CVQ+T W + + +G+ +
Sbjct: 76 EHNEIDQGLPLTFTPVDPKKGVIRESTDLNIIFSANSICVQTTQWKLDDFDETTGQYFIT 135
Query: 634 TGGDVGERAYGSYFRIVAVEGRAGIYNIQWCPTDVCNICRFRCGTAGILRENGKILLALD 455
GGD G + +E Y + +CPT VC+ C+ C GI ++G LAL
Sbjct: 136 LGGDQGNPGVETISNWFKIEKYDRDYKLLYCPT-VCDFCKVICRDIGIFIQDGVRRLALS 194
Query: 454 GGMLPVVFQK 425
V+F+K
Sbjct: 195 DVPFKVMFKK 204
>pir||T03803 tumor-related protein, clone NF34 - common tobacco
gi|1762933|gb|AAC49969.1| tumor-related protein
[Nicotiana tabacum]
Length = 210
Score = 72.4 bits (176), Expect = 7e-12
Identities = 39/130 (30%), Positives = 62/130 (47%)
Frame = -3
Query: 814 ENTDLPEGFPVKFTPFAKGDKYVKLGKDFTVVFSAATTCVQSTAWSVGSTEAKSGRRLVV 635
E ++ G P+ FTP ++ D + FSAA+ CVQ+T W + + +G+ +
Sbjct: 76 EQQEIKNGLPLTFTPVNPKKGVIRESTDLNIKFSAASICVQTTLWKLDDFDETTGKYFIT 135
Query: 634 TGGDVGERAYGSYFRIVAVEGRAGIYNIQWCPTDVCNICRFRCGTAGILRENGKILLALD 455
GG+ G + +E Y + +CPT VCN C+ C GI ++G LAL
Sbjct: 136 IGGNEGNPGRETISNWFKIEKFERDYKLVYCPT-VCNFCKVICKDVGIFIQDGIRRLALS 194
Query: 454 GGMLPVVFQK 425
V+F+K
Sbjct: 195 DVPFKVMFKK 204
>dbj|BAA05474.1| tumor-related protein [Nicotiana glauca x Nicotiana langsdorffii]
Length = 125
Score = 69.7 bits (169), Expect = 5e-11
Identities = 38/123 (30%), Positives = 59/123 (47%)
Frame = -3
Query: 793 GFPVKFTPFAKGDKYVKLGKDFTVVFSAATTCVQSTAWSVGSTEAKSGRRLVVTGGDVGE 614
G P+ FTP ++ D + FSAA+ CVQ+T W + + +G+ + GG+ G
Sbjct: 3 GLPLTFTPVNPKKGVIRESTDLNIKFSAASICVQTTLWKLDDFDETTGKYFITIGGNEGN 62
Query: 613 RAYGSYFRIVAVEGRAGIYNIQWCPTDVCNICRFRCGTAGILRENGKILLALDGGMLPVV 434
+ +E Y + +CPT VCN C+ C GI ++G LAL V+
Sbjct: 63 PGRETISNWFKIEKFERDYKLVYCPT-VCNFCKVICKDVGIFIQDGIRRLALSDVPFKVM 121
Query: 433 FQK 425
F+K
Sbjct: 122 FKK 124
>dbj|BAA82843.1| miraculin homologue [Solanum melongena]
Length = 160
Score = 69.7 bits (169), Expect = 5e-11
Identities = 35/119 (29%), Positives = 60/119 (50%)
Frame = -3
Query: 814 ENTDLPEGFPVKFTPFAKGDKYVKLGKDFTVVFSAATTCVQSTAWSVGSTEAKSGRRLVV 635
E ++ +G P+ FTPF ++ D ++FSA + CVQ+T W + + + +G+ +
Sbjct: 41 EQEEVKQGLPLTFTPFNPKKGVIRESTDLNIIFSANSICVQTTQWKLDNFDETTGKYFIT 100
Query: 634 TGGDVGERAYGSYFRIVAVEGRAGIYNIQWCPTDVCNICRFRCGTAGILRENGKILLAL 458
GG+ G + +E Y + +CPT VC+ C+ C GI ++G LAL
Sbjct: 101 LGGNQGNPGRETISNWFKIEKFERDYKLVYCPT-VCDFCKVICKDIGIFIQDGVRRLAL 158
>sp|P16348|APIB_SOLTU Aspartic protease inhibitor 11 (Cathepsin D inhibitor PDI)
(Allergen Sola t 2) gi|68834|pir||XKPODC cathepsin D
inhibitor pdi - potato gi|226412|prf||1511092A cathepsin
D inhibitor
Length = 188
Score = 65.1 bits (157), Expect = 1e-09
Identities = 51/139 (36%), Positives = 73/139 (51%), Gaps = 9/139 (6%)
Frame = -3
Query: 811 NTDL-PEGFPVKFTPFAKGDKYVKLGKDFTVVFSAATT--CVQSTAWSVGSTEAKSGRRL 641
N+D+ P G PV+F P + G +L + F+ AT CV T W VG+ A L
Sbjct: 56 NSDVGPSGTPVRFIPLSGGIFEDQL---LNIQFNIATVKLCVSYTIWKVGNLNAYFRTML 112
Query: 640 VVTGGDVGERAYGSYFRIVAVEGRAGIYNIQWCPTD---VCNICRFR--CGTAGILRENG 476
+ TGG +G+ A SYF+IV + YN+ +CP +C CR C G++ +NG
Sbjct: 113 LETGGTIGQ-ADSSYFKIVKLSNFG--YNLLYCPITPPFLCPFCRDDNFCAKVGVVIQNG 169
Query: 475 KILLAL-DGGMLPVVFQKV 422
K LAL + L V+FQ+V
Sbjct: 170 KRRLALVNENPLDVLFQEV 188
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 760,800,795
Number of Sequences: 1393205
Number of extensions: 18038822
Number of successful extensions: 49463
Number of sequences better than 10.0: 123
Number of HSP's better than 10.0 without gapping: 46738
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49357
length of database: 448,689,247
effective HSP length: 121
effective length of database: 280,111,442
effective search space used: 42016716300
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
