Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC015467A_C01 KMC015467A_c01
(520 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAC43187.1| unknown protein [Arabidopsis thaliana] 113 1e-24
ref|NP_565321.1| hypothetical protein; protein id: At2g05230.1 [... 113 1e-24
ref|NP_680345.1| similar to DnaJ protein-like; protein id: At5g3... 102 2e-21
gb|AAK52144.1|AC084380_17 putative heat shock protein [Oryza sat... 81 8e-15
ref|NP_180126.1| putative DnaJ protein; protein id: At2g25560.1,... 75 5e-13
>dbj|BAC43187.1| unknown protein [Arabidopsis thaliana]
Length = 200
Score = 113 bits (283), Expect = 1e-24
Identities = 50/77 (64%), Positives = 58/77 (74%)
Frame = -1
Query: 520 EELGVCVTPLIKLSGFKTVYKSNADKSAIKWIPRREMLRFSHQVPSWLLKGEASNLPERC 341
E+ GVCVTPL+KL G+KTVY + + + KWIPR EMLRFSHQVPSW LK S PE C
Sbjct: 121 EQYGVCVTPLVKLEGYKTVYHRSTREDSKKWIPRCEMLRFSHQVPSWFLKDATSGFPENC 180
Query: 340 WDLDPAATPDDLLHAAA 290
WDLDPAA P++LLH A
Sbjct: 181 WDLDPAAIPEELLHIGA 197
>ref|NP_565321.1| hypothetical protein; protein id: At2g05230.1 [Arabidopsis
thaliana] gi|18396006|ref|NP_565322.1| expressed
protein; protein id: At2g05250.1, supported by cDNA:
gi_15983798 [Arabidopsis thaliana]
gi|25411152|pir||D84466 hypothetical protein At2g05250
[imported] - Arabidopsis thaliana
gi|4755194|gb|AAD29061.1| hypothetical protein
[Arabidopsis thaliana] gi|4755195|gb|AAD29062.1|
expressed protein [Arabidopsis thaliana]
gi|15983799|gb|AAL10496.1| At2g05250/F5G3.15
[Arabidopsis thaliana] gi|24111445|gb|AAN46891.1|
At2g05250/F5G3.15 [Arabidopsis thaliana]
Length = 706
Score = 113 bits (283), Expect = 1e-24
Identities = 50/77 (64%), Positives = 58/77 (74%)
Frame = -1
Query: 520 EELGVCVTPLIKLSGFKTVYKSNADKSAIKWIPRREMLRFSHQVPSWLLKGEASNLPERC 341
E+ GVCVTPL+KL G+KTVY + + + KWIPR EMLRFSHQVPSW LK S PE C
Sbjct: 627 EQYGVCVTPLVKLEGYKTVYHRSTREDSKKWIPRCEMLRFSHQVPSWFLKDATSGFPENC 686
Query: 340 WDLDPAATPDDLLHAAA 290
WDLDPAA P++LLH A
Sbjct: 687 WDLDPAAIPEELLHIGA 703
>ref|NP_680345.1| similar to DnaJ protein-like; protein id: At5g35753.1 [Arabidopsis
thaliana]
Length = 592
Score = 102 bits (255), Expect = 2e-21
Identities = 45/77 (58%), Positives = 56/77 (72%)
Frame = -1
Query: 520 EELGVCVTPLIKLSGFKTVYKSNADKSAIKWIPRREMLRFSHQVPSWLLKGEASNLPERC 341
E+ GVC+ PL+K+ G+KTVY + + KWIPRREMLRFSHQVPS LK E +P C
Sbjct: 513 EQFGVCIAPLVKVDGYKTVYCRRDKEESKKWIPRREMLRFSHQVPSRFLKEETCGVPGNC 572
Query: 340 WDLDPAATPDDLLHAAA 290
WDLDP+A P++LLH A
Sbjct: 573 WDLDPSAIPEELLHNGA 589
>gb|AAK52144.1|AC084380_17 putative heat shock protein [Oryza sativa]
Length = 748
Score = 80.9 bits (198), Expect = 8e-15
Identities = 38/74 (51%), Positives = 56/74 (75%), Gaps = 1/74 (1%)
Frame = -1
Query: 520 EELGVCVTPLIKLSGFKTVYKSNADKSAIKWIPRREMLRFSHQVPSWLLKG-EASNLPER 344
E+LG+ V PL+K++GF+TV++ N D +AIK IP+ EM RFSH+VP + + G EA N+P+
Sbjct: 659 EDLGISVIPLVKVAGFRTVFQRNQDLNAIKKIPKEEMFRFSHEVPFYRMSGEEAPNVPKD 718
Query: 343 CWDLDPAATPDDLL 302
++LDPAA +LL
Sbjct: 719 SYELDPAAISKELL 732
>ref|NP_180126.1| putative DnaJ protein; protein id: At2g25560.1, supported by cDNA:
gi_14194100, supported by cDNA: gi_18175672, supported
by cDNA: gi_20465658 [Arabidopsis thaliana]
gi|25412332|pir||H84649 probable DnaJ protein [imported]
- Arabidopsis thaliana
gi|14194101|gb|AAK56245.1|AF367256_1 At2g25560/F13B15.22
[Arabidopsis thaliana] gi|18175673|gb|AAL59908.1|
putative DnaJ protein [Arabidopsis thaliana]
gi|20197751|gb|AAM15231.1| putative DnaJ protein
[Arabidopsis thaliana] gi|20465659|gb|AAM20298.1|
putative DnaJ protein [Arabidopsis thaliana]
gi|23506045|gb|AAN28882.1| At2g25560/F13B15.22
[Arabidopsis thaliana]
Length = 656
Score = 75.1 bits (183), Expect = 5e-13
Identities = 39/76 (51%), Positives = 48/76 (62%), Gaps = 1/76 (1%)
Frame = -1
Query: 520 EELGVCVTPLIKLSGFKTVYKSNADKSAIKWIPRREMLRFSHQVPSWLLKG-EASNLPER 344
EE GV V PL+K++GFK V+ + D K R E+ RFSH++PS+LL G EA P
Sbjct: 576 EEYGVVVVPLVKVAGFKAVFHHHLDSKETKRFLRDEISRFSHKIPSYLLTGQEAPGAPRG 635
Query: 343 CWDLDPAATPDDLLHA 296
C LDPAATP LL A
Sbjct: 636 CRQLDPAATPSQLLQA 651
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 443,122,216
Number of Sequences: 1393205
Number of extensions: 9334991
Number of successful extensions: 28611
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 27537
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28576
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 16442828304
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
