KMC015269A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KMC015269A_C01 KMC015269A_c01
AACTGGCAAACCACCAATAGAATATGTCAGGTGTTTCAAACAAGGTCTACAATTCCCATA
ATGCAAATTACGTACACCACCAAATTAAATACTACCCTAGTCTTATGTATTAAATTTTCA
CATTAACCAGCAGCAACAGACTAAGCTAACTGGGCTCCGCCACCAGTTTGATGCAGCATC
GCGTCGATTTCATCCCCATCCTCCATTTCCAGCTCATCAGGACCTCGTGCCGAATTCGGC
ACGAGGCTGAAACCCTAATCCATCTTCCTGTGAATTTTCCGAAGATCGAAGCTCTGAACG
TTGAAATTAGCGATGCCGCAGAGACACTCGAAGAACAACAACGATCTCGCCTTCTTCACC
TACGATGAGAAGCGCAAACTCGGGTATGGCACTCAGAAGGAGAGGCTGGGTAAGGATTCC
ATTAAGCCCTTCGATGCTTGTTGCCTCTGCCTCAAATCCCTAATTGACCCCATGAGCTGC
CAAAAGGGCCATCTCTATTGCAAAGAGTGCATTCTTCAGTGCTTGTTGTCTCAGAAGAAA
GACATTCAAAGGAGGCTTGTGGCCCATGCTGCTCAGCAGAAGCAAGAAAAAGACGAGGAA
GAAGAGAGATTGACATTGCAAAAGGCTAAAGAGCTTGAAGCATTTGATCA


Nr search

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KMC015269A_C01 KMC015269A_c01
         (650 letters)

Database: nr 
           1,393,205 sequences; 448,689,247 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_564781.1| expressed protein; protein id: At1g61620.1, sup...   197  8e-50
dbj|BAC41858.1| unknown protein [Arabidopsis thaliana]                196  2e-49
ref|NP_703524.1| hypothetical protein [Plasmodium falciparum 3D7...    89  4e-17
gb|AAH11249.1|AAH11249 Similar to eNOS interacting protein [Homo...    86  4e-16
ref|NP_057037.1| eNOS interacting protein; CGI-25 protein [Homo ...    86  4e-16

>ref|NP_564781.1| expressed protein; protein id: At1g61620.1, supported by cDNA:
           15739. [Arabidopsis thaliana] gi|25404329|pir||F96641
           hypothetical protein T25B24.3 [imported] - Arabidopsis
           thaliana gi|4585875|gb|AAD25548.1|AC005850_5 Unknown
           protein [Arabidopsis thaliana]
           gi|21553686|gb|AAM62779.1| unknown [Arabidopsis
           thaliana]
          Length = 310

 Score =  197 bits (502), Expect = 8e-50
 Identities = 88/112 (78%), Positives = 103/112 (91%)
 Frame = +1

Query: 313 MPQRHSKNNNDLAFFTYDEKRKLGYGTQKERLGKDSIKPFDACCLCLKSLIDPMSCQKGH 492
           MPQRHSKNNNDLA+FTYDEK+KLGYGTQ+ERLG+DSIKPFDAC LCLK  IDPM C KGH
Sbjct: 1   MPQRHSKNNNDLAYFTYDEKKKLGYGTQRERLGRDSIKPFDACSLCLKPFIDPMCCHKGH 60

Query: 493 LYCKECILQCLLSQKKDIQRRLVAHAAQQKQEKDEEEERLTLQKAKELEAFD 648
           ++C+ECIL+C L+QKKDIQRRL AH++Q+KQ+KDEEEERL LQKA+EL+ FD
Sbjct: 61  VFCRECILECFLAQKKDIQRRLAAHSSQKKQDKDEEEERLMLQKARELDEFD 112

>dbj|BAC41858.1| unknown protein [Arabidopsis thaliana]
          Length = 310

 Score =  196 bits (499), Expect = 2e-49
 Identities = 87/112 (77%), Positives = 103/112 (91%)
 Frame = +1

Query: 313 MPQRHSKNNNDLAFFTYDEKRKLGYGTQKERLGKDSIKPFDACCLCLKSLIDPMSCQKGH 492
           MPQRHSKNNNDLA+FTYDEK+KLGYGTQ+ERLG+DSIKPFDAC LCLK  IDPM C KGH
Sbjct: 1   MPQRHSKNNNDLAYFTYDEKKKLGYGTQRERLGRDSIKPFDACSLCLKPFIDPMCCHKGH 60

Query: 493 LYCKECILQCLLSQKKDIQRRLVAHAAQQKQEKDEEEERLTLQKAKELEAFD 648
           ++C+EC+L+C L+QKKDIQRRL AH++Q+KQ+KDEEEERL LQKA+EL+ FD
Sbjct: 61  VFCRECMLECFLAQKKDIQRRLAAHSSQKKQDKDEEEERLMLQKARELDEFD 112

>ref|NP_703524.1| hypothetical protein [Plasmodium falciparum 3D7]
           gi|23504666|emb|CAD51544.1| hypothetical protein
           [Plasmodium falciparum 3D7]
          Length = 268

 Score = 89.4 bits (220), Expect = 4e-17
 Identities = 45/108 (41%), Positives = 68/108 (62%)
 Frame = +1

Query: 322 RHSKNNNDLAFFTYDEKRKLGYGTQKERLGKDSIKPFDACCLCLKSLIDPMSCQKGHLYC 501
           RHSKNN     FTY E++K+  GT +ERLGKDS++ F+ C +CL++  +P+S   GH++C
Sbjct: 3   RHSKNNTANPIFTYHERKKVK-GTLRERLGKDSMRKFEQCWICLRTAENPVSSPYGHIFC 61

Query: 502 KECILQCLLSQKKDIQRRLVAHAAQQKQEKDEEEERLTLQKAKELEAF 645
           K CI+   L+QKK   R+   +    K  K +++E L  +K KE + F
Sbjct: 62  KICIINNFLNQKKIYARKKKEYEDYIKDLKKKKKEELLQEKEKEKKKF 109

>gb|AAH11249.1|AAH11249 Similar to eNOS interacting protein [Homo sapiens]
          Length = 301

 Score = 85.9 bits (211), Expect = 4e-16
 Identities = 46/106 (43%), Positives = 67/106 (62%), Gaps = 4/106 (3%)
 Frame = +1

Query: 322 RHSKNNNDLAFFTYDEKRK----LGYGTQKERLGKDSIKPFDACCLCLKSLIDPMSCQKG 489
           RH KN    A +TY EK+K     GYGTQ  RL +D++K FD CCL L+   DP+    G
Sbjct: 3   RHGKNCTAGAVYTYHEKKKDTAASGYGTQNIRLSRDAVKDFDCCCLSLQPCHDPVVTPDG 62

Query: 490 HLYCKECILQCLLSQKKDIQRRLVAHAAQQKQEKDEEEERLTLQKA 627
           +LY +E IL+ +L QKK+I R++ A+  Q+   ++E++E   LQ+A
Sbjct: 63  YLYEREAILEYILHQKKEIARQMKAYEKQRGTRREEQKE---LQRA 105

>ref|NP_057037.1| eNOS interacting protein; CGI-25 protein [Homo sapiens]
           gi|4680689|gb|AAD27734.1|AF132959_1 CGI-25 protein [Homo
           sapiens] gi|14424550|gb|AAH09299.1|AAH09299 eNOS
           interacting protein [Homo sapiens]
           gi|14603229|gb|AAH10077.1|AAH10077 eNOS interacting
           protein [Homo sapiens]
          Length = 301

 Score = 85.9 bits (211), Expect = 4e-16
 Identities = 46/106 (43%), Positives = 67/106 (62%), Gaps = 4/106 (3%)
 Frame = +1

Query: 322 RHSKNNNDLAFFTYDEKRK----LGYGTQKERLGKDSIKPFDACCLCLKSLIDPMSCQKG 489
           RH KN    A +TY EK+K     GYGTQ  RL +D++K FD CCL L+   DP+    G
Sbjct: 3   RHGKNCTAGAVYTYHEKKKDTAASGYGTQNIRLSRDAVKDFDCCCLSLQPCHDPVVTPDG 62

Query: 490 HLYCKECILQCLLSQKKDIQRRLVAHAAQQKQEKDEEEERLTLQKA 627
           +LY +E IL+ +L QKK+I R++ A+  Q+   ++E++E   LQ+A
Sbjct: 63  YLYEREAILEYILHQKKEIARQMKAYEKQRGTRREEQKE---LQRA 105

  Database: nr
    Posted date:  Apr 1, 2003  2:05 AM
  Number of letters in database: 448,689,247
  Number of sequences in database:  1,393,205
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 554,676,770
Number of Sequences: 1393205
Number of extensions: 11885747
Number of successful extensions: 41983
Number of sequences better than 10.0: 353
Number of HSP's better than 10.0 without gapping: 39374
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41845
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 27860523586
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)


EST assemble image


clone accession position
1 SPD083h07_f BP050665 1 386
2 MFB100d01_f BP041256 294 650




Lotus japonicus
Kazusa DNA Research Institute