Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC015266A_C01 KMC015266A_c01
(936 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAM65376.1| unknown [Arabidopsis thaliana] 141 1e-32
ref|NP_564784.1| expressed protein; protein id: At1g61730.1, sup... 140 2e-32
emb|CAC39398.1| storekeeper protein [Solanum tuberosum] 132 6e-30
ref|NP_194251.1| putative protein; protein id: At4g25210.1, supp... 130 2e-29
ref|NP_191949.1| putative protein; protein id: At4g00390.1, supp... 130 3e-29
>gb|AAM65376.1| unknown [Arabidopsis thaliana]
Length = 377
Score = 141 bits (356), Expect = 1e-32
Identities = 96/281 (34%), Positives = 145/281 (51%), Gaps = 2/281 (0%)
Frame = +2
Query: 62 KRPSPLEDPPTASSSSESEEEDDQPLSQVKHAAAEEEELSSEEEGSSEE--EEEDETTAP 235
K+ +PLEDPPTA+SS E + E + A ++ SSEE+ + + TTA
Sbjct: 3 KKLNPLEDPPTATSSDEDDVETSEA------GEASDDSSSSEEDAPIKIRIKSPSATTAA 56
Query: 236 APPAATTSHTKPPQPEPESDSATQSDSESDTDSDQAPSASAPTPNPKVKPLATKPMDQTQ 415
APPA +T+ + +SDS ++++++SD++S P++ + K D T
Sbjct: 57 APPAKSTAVSAAA----DSDSGSETETDSDSESTNPPNSGSGKTIALNAVNLKKKEDPTS 112
Query: 416 THKPKAQPSPAPAKSAAKRAAESNANAGDSKRAKKKAVDSAPAAAAGSDEEMEEDGKKSG 595
+ A P+ KS KR A A +KR KK EE KK G
Sbjct: 113 SSATLALPA---VKSGTKRPASEAAATTSTKRVKKD----------------EETVKKPG 153
Query: 596 NDSKKQFTRLWSDEDEIAILKGLADFISKTGNDPLKYPDAFYDFVIRSLQADATRTQVKD 775
F RLWS+EDEI +L+G+ DF + TG P +AFYDF+ +S+ + ++ Q D
Sbjct: 154 G-----FQRLWSEEDEILVLQGMIDFKADTGKSPYVDTNAFYDFLKKSISFEVSKNQFMD 208
Query: 776 KVRRLKKKFQTLAGKGKNGETPKFPKVHDQKTFELAKKVWG 898
K+R L+KK+ + +G+N P F K HD+K FEL+K +WG
Sbjct: 209 KIRSLRKKY--IGKEGRN--EPSFVKAHDKKAFELSKFIWG 245
>ref|NP_564784.1| expressed protein; protein id: At1g61730.1, supported by cDNA:
38650. [Arabidopsis thaliana] gi|25350270|pir||A96643
hypothetical protein T13M11.9 [imported] - Arabidopsis
thaliana gi|4508074|gb|AAD21418.1| 45341
Length = 376
Score = 140 bits (354), Expect = 2e-32
Identities = 97/282 (34%), Positives = 143/282 (50%), Gaps = 3/282 (1%)
Frame = +2
Query: 62 KRPSPLEDPPTASSSSESEEEDDQPLSQVKHAAAEEEELSSEEEGSSEEEEEDETTAPAP 241
K+ +PLEDPPTA+SS +EDD S+ A S++ SSEE+ + +P
Sbjct: 3 KKLNPLEDPPTATSS----DEDDVETSEAGEA--------SDDSSSSEEDVPIKIRIKSP 50
Query: 242 PAATTSHTKPPQPEPESDSATQSDSESDTDSDQAPSASAPTPNPKVKPLATKPMDQTQTH 421
A T + PP +A SDS S+T++D ++ P + K +A ++ +
Sbjct: 51 SATTAA--APPAKSTAVSTAADSDSGSETETDSDSESTNPPNSGSGKTIALNTVNLKKKE 108
Query: 422 KPKAQPSPA--PA-KSAAKRAAESNANAGDSKRAKKKAVDSAPAAAAGSDEEMEEDGKKS 592
P + + PA KS KR A A +KR KK EE KK
Sbjct: 109 DPTSSSATLALPAMKSGTKRPASEAAATTSTKRVKKD----------------EESVKKP 152
Query: 593 GNDSKKQFTRLWSDEDEIAILKGLADFISKTGNDPLKYPDAFYDFVIRSLQADATRTQVK 772
G F RLWS+EDEI +L+G+ DF + TG P +AFYDF+ +S+ + ++ Q
Sbjct: 153 GG-----FQRLWSEEDEILVLQGMIDFKADTGKSPYVDTNAFYDFLKKSISFEVSKNQFM 207
Query: 773 DKVRRLKKKFQTLAGKGKNGETPKFPKVHDQKTFELAKKVWG 898
DK+R L+KK+ + +G+N P F K HD+K FEL+K +WG
Sbjct: 208 DKIRSLRKKY--IGKEGRN--EPSFVKAHDKKAFELSKFIWG 245
>emb|CAC39398.1| storekeeper protein [Solanum tuberosum]
Length = 399
Score = 132 bits (333), Expect = 6e-30
Identities = 101/292 (34%), Positives = 146/292 (49%), Gaps = 8/292 (2%)
Frame = +2
Query: 47 MAQKQKRPSPLEDPPTASSSSESEEEDDQPLSQVKHAAAEEEELSSEEEG---SSEEEEE 217
MA K K S L D P ++SSSE +E V+ + EEE+ S EEEG S EE EE
Sbjct: 1 MAPKTK--SRLVDQPPSASSSEEQE-------LVEESQEEEEQQSREEEGEEESGEETEE 51
Query: 218 DETTAPAPPAATTSHTK-----PPQPEPESDSATQSDSESDTDSDQAPSASAPTPNPKVK 382
DE A P ++ P +P+ S+S +++ S SD++++ S P+P
Sbjct: 52 DEEPKTAHPVVKKPISQKLVQTPQKPQFSSESGSENGSGSDSEAESGNSL----PSPSAS 107
Query: 383 PLATKPMDQTQTHKPKAQPSPAPAKSAAKRAAESNANAGDSKRAKKKAVDSAPAAAAGSD 562
KP A + P+K AAKR E+ G K P A
Sbjct: 108 DFTVKPN--------VAAKAATPSKPAAKRPQEAQKEKGKKK----------PKIA---- 145
Query: 563 EEMEEDGKKSGNDSKKQFTRLWSDEDEIAILKGLADFISKTGNDPLKYPDAFYDFVIRSL 742
EE+ KKS + LWSD+D++A+LKG+ ++ + G +P AF++F+ L
Sbjct: 146 ---EEEEKKSPATPRS----LWSDDDQLALLKGILEYKTVKGMEPSADMSAFHEFIRGKL 198
Query: 743 QADATRTQVKDKVRRLKKKFQTLAGKGKNGETPKFPKVHDQKTFELAKKVWG 898
QA+ +++Q+ DKVRRLKKKF T K+GE P F K D FE +K++WG
Sbjct: 199 QAEVSKSQISDKVRRLKKKFLT---NVKDGEEPVFKKGQDFLIFEHSKRIWG 247
>ref|NP_194251.1| putative protein; protein id: At4g25210.1, supported by cDNA:
gi_13272448, supported by cDNA: gi_14423517 [Arabidopsis
thaliana] gi|7486062|pir||T05542 hypothetical protein
F24A6.50 - Arabidopsis thaliana
gi|4454009|emb|CAA23062.1| putative protein [Arabidopsis
thaliana] gi|7269371|emb|CAB79430.1| putative protein
[Arabidopsis thaliana]
gi|13272449|gb|AAK17163.1|AF325095_1 putative protein
[Arabidopsis thaliana]
Length = 368
Score = 130 bits (328), Expect = 2e-29
Identities = 90/252 (35%), Positives = 132/252 (51%), Gaps = 7/252 (2%)
Frame = +2
Query: 164 EEEELSSEEEGSSEEEEEDETTAPAPPAATTSHTKPPQPEPESDSATQSDSESDTDSDQA 343
E +SSEEE S EE E++A P +S +PESDS +S+SES + +
Sbjct: 11 ESPPVSSEEEESGSSGEESESSAEVPKKVESSQ------KPESDSEGESESESSSGPEPE 64
Query: 344 PSASAPTPNPKVKPLATKPMDQTQTHK---PKAQPSPAPAKSAAKRAAESNANAGDSKRA 514
S P K+KP+ TKP+ +T P++ + P K AA A + + D++
Sbjct: 65 ---SEPAKTIKLKPVGTKPIPETSGSAATVPESSTAKRPLKEAAPEAIKKQKTS-DTEHV 120
Query: 515 KKKAVDSAPAAAAGSDEEMEEDGKKSGNDSKKQFTRLWSDEDEIAILKGLADFISKTGND 694
KK + +E K S D+KK F RL+S+ DEIA+L+G+ DF S G D
Sbjct: 121 KKPITN-------------DEVKKISSEDAKKMFQRLFSETDEIALLQGIIDFTSTKG-D 166
Query: 695 PLKYPDAFYDFVIRSLQADATRTQVKDKVRRLKKKFQTLA----GKGKNGETPKFPKVHD 862
P + DAF +V + + DAT+ Q+ K++RLKKKF KGK + +F K +
Sbjct: 167 PYEDIDAFCIYVKKLIDFDATKNQIVTKLQRLKKKFNNAVKNSLKKGKTEDDIEFAKDLE 226
Query: 863 QKTFELAKKVWG 898
QK FEL++K+WG
Sbjct: 227 QKGFELSRKIWG 238
>ref|NP_191949.1| putative protein; protein id: At4g00390.1, supported by cDNA:
157614. [Arabidopsis thaliana] gi|7485269|pir||T01532
hypothetical protein A_IG005I10.6 - Arabidopsis thaliana
gi|2252829|gb|AAB62828.1| A_IG005I10.6 gene product
[Arabidopsis thaliana]
gi|6049871|gb|AAF02786.1|AF195115_6 F5I10.6 gene product
[Arabidopsis thaliana] gi|7267126|emb|CAB80797.1|
putative protein [Arabidopsis thaliana]
Length = 364
Score = 130 bits (327), Expect = 3e-29
Identities = 92/274 (33%), Positives = 140/274 (50%), Gaps = 2/274 (0%)
Frame = +2
Query: 83 DPPTASSSSESEEEDDQPLSQVKHAAAEEEE-LSSEEEGSSEEEEEDETTAPAPPAATTS 259
DPPTA SS +EDD S+ +++EE+E + S ++ + + A PA +TS
Sbjct: 6 DPPTAPSS----DEDDVETSEDDSSSSEEDEPIKSLPATTAAAPAKSTAVSAATPAKSTS 61
Query: 260 -HTKPPQPEPESDSATQSDSESDTDSDQAPSASAPTPNPKVKPLATKPMDQTQTHKPKAQ 436
P +A SDS S++++D ++ P + K +A+K D + A
Sbjct: 62 VSAAAPSKSTAVSAAADSDSGSESETDSDSESTDPPKSGSGKTIASKKKDDPSSST--AT 119
Query: 437 PSPAPAKSAAKRAAESNANAGDSKRAKKKAVDSAPAAAAGSDEEMEEDGKKSGNDSKKQF 616
+ KS AKRAA S A +KR KK EE KK F
Sbjct: 120 LALPAVKSGAKRAA-SEAATTSTKRVKKD----------------EESVKKPA-----LF 157
Query: 617 TRLWSDEDEIAILKGLADFISKTGNDPLKYPDAFYDFVIRSLQADATRTQVKDKVRRLKK 796
RLWSD+DEI++L+G+ D+ + TG P +AFY+F +S+ + +++Q DKVR L+K
Sbjct: 158 QRLWSDDDEISMLQGMIDYHADTGKSPSADTNAFYEFQKKSISFEVSKSQFSDKVRSLRK 217
Query: 797 KFQTLAGKGKNGETPKFPKVHDQKTFELAKKVWG 898
K++ GK + P+F K HD+K FEL+K +WG
Sbjct: 218 KYRAKEGK----DEPRFVKAHDKKAFELSKFIWG 247
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,045,729,686
Number of Sequences: 1393205
Number of extensions: 34419330
Number of successful extensions: 747714
Number of sequences better than 10.0: 18797
Number of HSP's better than 10.0 without gapping: 189148
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 423212
length of database: 448,689,247
effective HSP length: 123
effective length of database: 277,325,032
effective search space used: 52137106016
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
