>KMC015249A_C01 KMC015249A_c01
atcagaacaGGCTAGATAAAAATGCCTGACAATTTATTAAATACAAGTGAATATTACATT
GATATCATTATACAAGCAATATATTTCATCTTCAGTTCAATCAATCGTTTGTTAAGGTAC
AAAAATCATGTTTCCTAACAGAATCTAGTTCCACTGCATAAAAGAAATTACTGTTTCACC
ATGAAGGAACTTTTACAACTGCAACCACCAACTGCGCTAGGGTTTTCAGTCACCTGCAAA
TGAAACCAGAAACTGGAAAATTGTCCTTGGTTAAATGTCTCAAGAATGCTATTAAAACTA
ATAAAGATTAGTTTTGGCCACACAGCCCTGTTTTCCATACACTCTCACATGCTCAATTTA
ATTCCATACTCTCACACGCCCATTTCAATTCCATACACTCTACAGTCTCACA

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KMC015249A_C01 KMC015249A_c01
         (412 letters)

Database: nr 
           1,393,205 sequences; 448,689,247 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

pir||T48417 hypothetical protein F8F6.110 - Arabidopsis thaliana...    41  0.004
ref|NP_568130.1| Expressed protein; protein id: At5g03905.1, sup...    41  0.004
gb|AAM64402.1| unknown [Arabidopsis thaliana]                          41  0.004
ref|NP_180867.1| leucine rich repeat protein family; protein id:...    32  1.9
ref|XP_203592.1| RIKEN cDNA 0710001C05 [Mus musculus]                  31  3.2

>pir||T48417 hypothetical protein F8F6.110 - Arabidopsis thaliana
           gi|7406400|emb|CAB85510.1| putative protein [Arabidopsis
           thaliana]
          Length = 757

 Score = 40.8 bits (94), Expect = 0.004
 Identities = 18/20 (90%), Positives = 18/20 (90%)
 Frame = -3

Query: 233 VTENPSAVGGCSCKSSFMVK 174
           V  NPSAVGGCSCKSSFMVK
Sbjct: 737 VAVNPSAVGGCSCKSSFMVK 756

>ref|NP_568130.1| Expressed protein; protein id: At5g03905.1, supported by cDNA:
           24058. [Arabidopsis thaliana] gi|9758020|dbj|BAB08617.1|
           gene_id:MED24.21~unknown protein [Arabidopsis thaliana]
          Length = 158

 Score = 40.8 bits (94), Expect = 0.004
 Identities = 18/20 (90%), Positives = 18/20 (90%)
 Frame = -3

Query: 233 VTENPSAVGGCSCKSSFMVK 174
           V  NPSAVGGCSCKSSFMVK
Sbjct: 138 VAVNPSAVGGCSCKSSFMVK 157

>gb|AAM64402.1| unknown [Arabidopsis thaliana]
          Length = 158

 Score = 40.8 bits (94), Expect = 0.004
 Identities = 18/20 (90%), Positives = 18/20 (90%)
 Frame = -3

Query: 233 VTENPSAVGGCSCKSSFMVK 174
           V  NPSAVGGCSCKSSFMVK
Sbjct: 138 VAVNPSAVGGCSCKSSFMVK 157

>ref|NP_180867.1| leucine rich repeat protein family; protein id: At2g33080.1
           [Arabidopsis thaliana] gi|25408242|pir||B84741
           hypothetical protein At2g33080 [imported] - Arabidopsis
           thaliana gi|2924783|gb|AAC04912.1| putative leucine-rich
           repeat disease resistance protein [Arabidopsis thaliana]
          Length = 740

 Score = 32.0 bits (71), Expect = 1.9
 Identities = 16/47 (34%), Positives = 21/47 (44%)
 Frame = +3

Query: 258 KLSLVKCLKNAIKTNKD*FWPHSPVFHTLSHAQFNSILSHAHFNSIH 398
           KL L  CL   +  N   FW H   F  LSH  F S    + F +++
Sbjct: 79  KLQLNACLSGTLNPNSSLFWFHQLRFLNLSHNNFTSTSFPSEFGNLN 125

>ref|XP_203592.1| RIKEN cDNA 0710001C05 [Mus musculus]
          Length = 154

 Score = 31.2 bits (69), Expect = 3.2
 Identities = 14/21 (66%), Positives = 14/21 (66%)
 Frame = -3

Query: 236 QVTENPSAVGGCSCKSSFMVK 174
           QV  NP A  GCSC SSF VK
Sbjct: 133 QVLNNPQAQQGCSCGSSFSVK 153

  Database: nr
    Posted date:  Apr 1, 2003  2:05 AM
  Number of letters in database: 448,689,247
  Number of sequences in database:  1,393,205
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 323,081,747
Number of Sequences: 1393205
Number of extensions: 5932444
Number of successful extensions: 13963
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 13565
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13961
length of database: 448,689,247
effective HSP length: 112
effective length of database: 292,650,287
effective search space used: 7023606888
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

EST assemble image

clone accession position 1 MWM064d01_f AV765723 1 383 2 SPDL073e04_f BP056526 10 412

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