Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC015210A_C01 KMC015210A_c01
(608 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAC53984.1| putative chalcone isomerase [Lotus japonicus] 168 4e-41
pir||S29554 chalcone isomerase (EC 5.5.1.6) - apple tree (fragme... 119 2e-26
sp|P51117|CFI_VITVI Chalcone--flavonone isomerase (Chalcone isom... 118 7e-26
pir||S29555 chalcone isomerase (EC 5.5.1.6) - apple tree (fragme... 118 7e-26
sp|O22604|CFI_IPOPU Chalcone--flavonone isomerase (Chalcone isom... 117 1e-25
>dbj|BAC53984.1| putative chalcone isomerase [Lotus japonicus]
Length = 221
Score = 168 bits (426), Expect = 4e-41
Identities = 87/87 (100%), Positives = 87/87 (100%)
Frame = -2
Query: 607 DKFVSVFKDQTFPPGSSILFTVLPKGSLAISFSKDGSIPEVESAVIDNKLLSEAVLESMI 428
DKFVSVFKDQTFPPGSSILFTVLPKGSLAISFSKDGSIPEVESAVIDNKLLSEAVLESMI
Sbjct: 135 DKFVSVFKDQTFPPGSSILFTVLPKGSLAISFSKDGSIPEVESAVIDNKLLSEAVLESMI 194
Query: 427 GAHGVSPAAKQSLASRLSELFKHHAEV 347
GAHGVSPAAKQSLASRLSELFKHHAEV
Sbjct: 195 GAHGVSPAAKQSLASRLSELFKHHAEV 221
>pir||S29554 chalcone isomerase (EC 5.5.1.6) - apple tree (fragment)
gi|19585|emb|CAA48774.1| chalcone isomerase [Malus sp.]
Length = 157
Score = 119 bits (299), Expect = 2e-26
Identities = 58/80 (72%), Positives = 69/80 (85%)
Frame = -2
Query: 607 DKFVSVFKDQTFPPGSSILFTVLPKGSLAISFSKDGSIPEVESAVIDNKLLSEAVLESMI 428
++F+ VFKDQ FPPG+SILFT PKGSL ISFSKD S+PE +AVI+NKLLSE VLES++
Sbjct: 73 EQFIDVFKDQNFPPGASILFTQSPKGSLTISFSKDASMPEATNAVIENKLLSETVLESIV 132
Query: 427 GAHGVSPAAKQSLASRLSEL 368
G HGVSPA KQSLA+RLS+L
Sbjct: 133 GKHGVSPATKQSLAARLSQL 152
>sp|P51117|CFI_VITVI Chalcone--flavonone isomerase (Chalcone isomerase)
gi|499036|emb|CAA53577.1| chalcone isomerase [Vitis
vinifera]
Length = 234
Score = 118 bits (295), Expect = 7e-26
Identities = 59/81 (72%), Positives = 71/81 (86%)
Frame = -2
Query: 607 DKFVSVFKDQTFPPGSSILFTVLPKGSLAISFSKDGSIPEVESAVIDNKLLSEAVLESMI 428
+KF V KD+TFPPG+SILFT P G+L +SFSKDGS+PEV +AVI+NKLL+EAVLES+I
Sbjct: 135 EKFNEVLKDETFPPGNSILFTHSPLGALTMSFSKDGSLPEVGNAVIENKLLTEAVLESII 194
Query: 427 GAHGVSPAAKQSLASRLSELF 365
G HGVSP AK+SLA+RLSELF
Sbjct: 195 GKHGVSPEAKKSLAARLSELF 215
>pir||S29555 chalcone isomerase (EC 5.5.1.6) - apple tree (fragment)
gi|19587|emb|CAA48775.1| chalcone isomerase [Malus sp.]
Length = 156
Score = 118 bits (295), Expect = 7e-26
Identities = 57/80 (71%), Positives = 68/80 (84%)
Frame = -2
Query: 607 DKFVSVFKDQTFPPGSSILFTVLPKGSLAISFSKDGSIPEVESAVIDNKLLSEAVLESMI 428
++F+ FKDQ FPPG+SILFT PKGSL ISFSKD S+PE +AVI+NKLLSE VLES++
Sbjct: 72 EQFIDAFKDQNFPPGASILFTQSPKGSLTISFSKDASMPEATNAVIENKLLSETVLESIV 131
Query: 427 GAHGVSPAAKQSLASRLSEL 368
G HGVSPA KQSLA+RLS+L
Sbjct: 132 GKHGVSPATKQSLAARLSQL 151
>sp|O22604|CFI_IPOPU Chalcone--flavonone isomerase (Chalcone isomerase)
gi|7437428|pir||T08006 chalcone isomerase (EC 5.5.1.6) -
common morning-glory gi|2599056|gb|AAB86474.1| chalcone
isomerase [Ipomoea purpurea]
Length = 241
Score = 117 bits (293), Expect = 1e-25
Identities = 61/90 (67%), Positives = 71/90 (78%)
Frame = -2
Query: 607 DKFVSVFKDQTFPPGSSILFTVLPKGSLAISFSKDGSIPEVESAVIDNKLLSEAVLESMI 428
DKF VF DQ FPPG+SI FT P GSL +SFSKDGS+PE+ SAVI+NK LSEAVLES+I
Sbjct: 135 DKFNDVFSDQMFPPGASIFFTQSPLGSLTVSFSKDGSMPEIASAVIENKPLSEAVLESII 194
Query: 427 GAHGVSPAAKQSLASRLSELFKHHAEV*SG 338
G+ GVSP AKQSLA RLSE+F + + SG
Sbjct: 195 GSKGVSPEAKQSLAVRLSEMFINGGDAISG 224
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 492,724,701
Number of Sequences: 1393205
Number of extensions: 10088689
Number of successful extensions: 22761
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 22141
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22738
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 24283162270
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
