Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC015181A_C01 KMC015181A_c01
(600 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_174260.1| lipase/hydrolase, putative; protein id: At1g296... 75 6e-13
gb|AAM64368.1| lipase/hydrolase, putative [Arabidopsis thaliana] 75 6e-13
gb|AAM63021.1| GDSL-motif lipase/hydrolase-like protein [Arabido... 70 2e-11
ref|NP_199379.1| GDSL-motif lipase/hydrolase-like protein; prote... 69 4e-11
pir||T05034 hypothetical protein F13C5.140 - Arabidopsis thalian... 68 8e-11
>ref|NP_174260.1| lipase/hydrolase, putative; protein id: At1g29670.1, supported by
cDNA: 23556., supported by cDNA: gi_18086454
[Arabidopsis thaliana] gi|25336248|pir||A86420 probable
lipase/hydrolase, 118270-120144 [imported] - Arabidopsis
thaliana gi|12323546|gb|AAG51758.1|AC068667_37
lipase/hydrolase, putative; 118270-120144 [Arabidopsis
thaliana] gi|18086455|gb|AAL57681.1| At1g29670/F15D2_22
[Arabidopsis thaliana]
Length = 363
Score = 75.1 bits (183), Expect = 6e-13
Identities = 41/94 (43%), Positives = 56/94 (58%), Gaps = 6/94 (6%)
Frame = -2
Query: 587 SKFIFINSTSIDRE---NSLVSGISVTDAACC---RTTLHGECIPDERPCYNRNEYVFWD 426
+KFI+IN+ I ++ N G VT+A CC R C+P +RPC +RN YVFWD
Sbjct: 268 AKFIYINAYGIFQDMITNPARFGFRVTNAGCCGIGRNAGQITCLPGQRPCRDRNAYVFWD 327
Query: 425 DFHPTEAWNLHTAMKSYDTSSNQAFTHPLDIKNL 324
FHPTEA N+ A +SY+ S + +P+DI L
Sbjct: 328 AFHPTEAANVIIARRSYNAQS-ASDAYPMDISRL 360
>gb|AAM64368.1| lipase/hydrolase, putative [Arabidopsis thaliana]
Length = 363
Score = 75.1 bits (183), Expect = 6e-13
Identities = 41/94 (43%), Positives = 56/94 (58%), Gaps = 6/94 (6%)
Frame = -2
Query: 587 SKFIFINSTSIDRE---NSLVSGISVTDAACC---RTTLHGECIPDERPCYNRNEYVFWD 426
+KFI+IN+ I ++ N G VT+A CC R C+P +RPC +RN YVFWD
Sbjct: 268 AKFIYINAYGIFQDMITNPARFGFRVTNAGCCGIGRNAGQITCLPGQRPCRDRNAYVFWD 327
Query: 425 DFHPTEAWNLHTAMKSYDTSSNQAFTHPLDIKNL 324
FHPTEA N+ A +SY+ S + +P+DI L
Sbjct: 328 AFHPTEAANVIIARRSYNAQS-ASDAYPMDISRL 360
>gb|AAM63021.1| GDSL-motif lipase/hydrolase-like protein [Arabidopsis thaliana]
Length = 362
Score = 70.1 bits (170), Expect = 2e-11
Identities = 40/96 (41%), Positives = 54/96 (55%), Gaps = 8/96 (8%)
Frame = -2
Query: 587 SKFIFINSTSIDRE---NSLVSGISVTDAACC---RTTLHGECIPDERPCYNRNEYVFWD 426
+KF +IN+ I ++ N G VT+A CC R C+P + PC NRNEYVFWD
Sbjct: 267 AKFTYINAYGIFQDIITNPARYGFRVTNAGCCGVGRNNGQITCLPGQAPCLNRNEYVFWD 326
Query: 425 DFHPTEAWNLHTAMKSY--DTSSNQAFTHPLDIKNL 324
FHP EA N+ +S+ + +SN HP DI+ L
Sbjct: 327 AFHPGEAANIVIGRRSFKREAASN---AHPYDIQQL 359
>ref|NP_199379.1| GDSL-motif lipase/hydrolase-like protein; protein id: At5g45670.1,
supported by cDNA: 18389., supported by cDNA:
gi_17933311, supported by cDNA: gi_20453402 [Arabidopsis
thaliana] gi|9758670|dbj|BAB09209.1| GDSL-motif
lipase/hydrolase-like protein [Arabidopsis thaliana]
gi|17933312|gb|AAL48238.1|AF446366_1 AT5g45670/MRA19_6
[Arabidopsis thaliana] gi|20453403|gb|AAM19940.1|
AT5g45670/MRA19_6 [Arabidopsis thaliana]
Length = 362
Score = 69.3 bits (168), Expect = 4e-11
Identities = 38/94 (40%), Positives = 52/94 (54%), Gaps = 6/94 (6%)
Frame = -2
Query: 587 SKFIFINSTSIDRE---NSLVSGISVTDAACC---RTTLHGECIPDERPCYNRNEYVFWD 426
+KF +IN+ I ++ N G VT+A CC R C+P + PC NRNEYVFWD
Sbjct: 267 AKFTYINAYGIFQDIITNPARYGFRVTNAGCCGVGRNNGQITCLPGQAPCLNRNEYVFWD 326
Query: 425 DFHPTEAWNLHTAMKSYDTSSNQAFTHPLDIKNL 324
FHP EA N+ +S+ + + HP DI+ L
Sbjct: 327 AFHPGEAANIVIGRRSFKREA-ASDAHPYDIQQL 359
>pir||T05034 hypothetical protein F13C5.140 - Arabidopsis thaliana
gi|2832625|emb|CAA16754.1| putative protein [Arabidopsis
thaliana] gi|7268691|emb|CAB78899.1| putative protein
[Arabidopsis thaliana]
Length = 626
Score = 68.2 bits (165), Expect = 8e-11
Identities = 38/94 (40%), Positives = 52/94 (54%), Gaps = 6/94 (6%)
Frame = -2
Query: 587 SKFIFINSTSIDRE---NSLVSGISVTDAACC---RTTLHGECIPDERPCYNRNEYVFWD 426
+KF +IN+ I ++ N G VT+A CC R C+P + PC NR+EYVFWD
Sbjct: 531 AKFTYINAYGIFQDMVANPSRYGFRVTNAGCCGVGRNNGQITCLPGQAPCLNRDEYVFWD 590
Query: 425 DFHPTEAWNLHTAMKSYDTSSNQAFTHPLDIKNL 324
FHP EA N+ +S+ S + HP DI+ L
Sbjct: 591 AFHPGEAANVVIGSRSFQRES-ASDAHPYDIQQL 623
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 474,899,201
Number of Sequences: 1393205
Number of extensions: 9616940
Number of successful extensions: 21323
Number of sequences better than 10.0: 114
Number of HSP's better than 10.0 without gapping: 20704
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21320
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 23426109484
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
