Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC015148A_C01 KMC015148A_c01
(627 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAL07491.1|AF414608_1 prunasin hydrolase isoform PH I precurs... 126 3e-28
gb|AAL35324.1|AF411131_1 prunasin hydrolase isoform PH C precurs... 126 3e-28
gb|AAL07434.1|AF413213_1 prunasin hydrolase isoform PH C precurs... 126 3e-28
pir||T09657 beta-glucosidase (EC 3.2.1.21) precursor, cyanogenic... 126 3e-28
gb|AAF34650.1|AF221526_1 prunasin hydrolase isoform PHA precurso... 125 3e-28
>gb|AAL07491.1|AF414608_1 prunasin hydrolase isoform PH I precursor [Prunus serotina]
Length = 513
Score = 126 bits (316), Expect = 3e-28
Identities = 53/75 (70%), Positives = 66/75 (87%)
Frame = -2
Query: 626 DTFRIDYYFRHLFYLQSAIRNGSNVKGYFAWSLLDNYEWSSGYTVRFGMNFVDYENGLKR 447
D RIDYY+RHL YLQ+AI+ G+NV+GYFAWSLLDN+EWS GYTVRFG+N++DY+NGL+R
Sbjct: 414 DANRIDYYYRHLCYLQAAIKEGANVQGYFAWSLLDNFEWSEGYTVRFGINYIDYDNGLER 473
Query: 446 YKKLSAKWFTNFLKR 402
+ KLS WF +FLKR
Sbjct: 474 HSKLSTHWFKSFLKR 488
>gb|AAL35324.1|AF411131_1 prunasin hydrolase isoform PH C precursor [Prunus serotina]
Length = 542
Score = 126 bits (316), Expect = 3e-28
Identities = 53/75 (70%), Positives = 66/75 (87%)
Frame = -2
Query: 626 DTFRIDYYFRHLFYLQSAIRNGSNVKGYFAWSLLDNYEWSSGYTVRFGMNFVDYENGLKR 447
D RIDYY+RHL YLQ+AI+ G+NV+GYFAWSLLDN+EWS GYTVRFG+N++DY+NGL+R
Sbjct: 443 DVNRIDYYYRHLCYLQAAIKEGANVQGYFAWSLLDNFEWSEGYTVRFGINYIDYDNGLER 502
Query: 446 YKKLSAKWFTNFLKR 402
+ KLS WF +FLKR
Sbjct: 503 HSKLSTHWFKSFLKR 517
>gb|AAL07434.1|AF413213_1 prunasin hydrolase isoform PH C precursor [Prunus serotina]
Length = 517
Score = 126 bits (316), Expect = 3e-28
Identities = 53/75 (70%), Positives = 66/75 (87%)
Frame = -2
Query: 626 DTFRIDYYFRHLFYLQSAIRNGSNVKGYFAWSLLDNYEWSSGYTVRFGMNFVDYENGLKR 447
D RIDYY+RHL YLQ+AI+ G+NV+GYFAWSLLDN+EWS GYTVRFG+N++DY+NGL+R
Sbjct: 418 DVNRIDYYYRHLCYLQAAIKEGANVQGYFAWSLLDNFEWSEGYTVRFGINYIDYDNGLER 477
Query: 446 YKKLSAKWFTNFLKR 402
+ KLS WF +FLKR
Sbjct: 478 HSKLSTHWFKSFLKR 492
>pir||T09657 beta-glucosidase (EC 3.2.1.21) precursor, cyanogenic - black cherry
gi|1236961|gb|AAA93032.1| prunasin hydrolase isoform PH
I precursor [Prunus serotina]
Length = 549
Score = 126 bits (316), Expect = 3e-28
Identities = 53/75 (70%), Positives = 66/75 (87%)
Frame = -2
Query: 626 DTFRIDYYFRHLFYLQSAIRNGSNVKGYFAWSLLDNYEWSSGYTVRFGMNFVDYENGLKR 447
D RIDYY+RHL YLQ+AI+ G+NV+GYFAWSLLDN+EWS GYTVRFG+N++DY+NGL+R
Sbjct: 450 DANRIDYYYRHLCYLQAAIKEGANVQGYFAWSLLDNFEWSEGYTVRFGINYIDYDNGLER 509
Query: 446 YKKLSAKWFTNFLKR 402
+ KLS WF +FLKR
Sbjct: 510 HSKLSTHWFKSFLKR 524
>gb|AAF34650.1|AF221526_1 prunasin hydrolase isoform PHA precursor [Prunus serotina]
Length = 537
Score = 125 bits (315), Expect = 3e-28
Identities = 54/76 (71%), Positives = 64/76 (84%)
Frame = -2
Query: 626 DTFRIDYYFRHLFYLQSAIRNGSNVKGYFAWSLLDNYEWSSGYTVRFGMNFVDYENGLKR 447
DT RIDYY+ HL YLQ+AI++G VKGYFAWS+LDN+EW+SGYTVRFG+N+VDY+NGLKR
Sbjct: 438 DTMRIDYYYHHLCYLQAAIKDGVRVKGYFAWSVLDNFEWNSGYTVRFGINYVDYDNGLKR 497
Query: 446 YKKLSAKWFTNFLKRY 399
K SA W NFLK Y
Sbjct: 498 RSKFSAHWLKNFLKNY 513
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 567,540,101
Number of Sequences: 1393205
Number of extensions: 12433738
Number of successful extensions: 37799
Number of sequences better than 10.0: 501
Number of HSP's better than 10.0 without gapping: 35777
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37613
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 25586195130
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)