Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC015092A_C01 KMC015092A_c01
(878 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB92921.1| P0460C04.14 [Oryza sativa (japonica cultivar-gro... 263 3e-69
gb|AAL36312.1| unknown protein [Arabidopsis thaliana] gi|2128117... 248 9e-65
ref|NP_565826.1| expressed protein; protein id: At2g35820.1, sup... 248 1e-64
gb|AAM64294.1| unknown [Arabidopsis thaliana] 246 4e-64
ref|NP_565827.1| expressed protein; protein id: At2g35830.1, sup... 244 9e-64
>dbj|BAB92921.1| P0460C04.14 [Oryza sativa (japonica cultivar-group)]
Length = 244
Score = 263 bits (671), Expect = 3e-69
Identities = 126/185 (68%), Positives = 151/185 (81%), Gaps = 1/185 (0%)
Frame = -3
Query: 735 EEPKLLKLKPIEATPATFKDYGQVIQASPDGHGFGPHDAQLDLTRGIPRFYIMHLENRPL 556
EE +++ L+ +EATP +F +GQVI A+PDG FGPHDAQLDLTRGIPRFYIM LE RPL
Sbjct: 60 EEARVVALRAVEATPESFAPFGQVIAATPDGDEFGPHDAQLDLTRGIPRFYIMRLEKRPL 119
Query: 555 KFSNITHHASVTQCLGSIGGHAWYLGVAKPSIVDSSEIKDDTD-RKVVQSRSGHLYVPPA 379
KF ITHHASVTQCLGSIGG WYLGVAKPSIV+ + D RK VQSR+GH Y+PP
Sbjct: 120 KFWTITHHASVTQCLGSIGGEDWYLGVAKPSIVEDGAHEQGGDGRKPVQSRAGHYYLPPD 179
Query: 378 IEDIHVFKVTGSKFLKLNRGTWHAGPIFKADSMDFYNLELSNTNEIDHTTHNFKKDNGVI 199
++ VF+V+G+KFLKL+ GTWHAGP FKAD++DFYNLELSNTN +DHTTH+FKKD+GV
Sbjct: 180 PAEVCVFRVSGAKFLKLHIGTWHAGPQFKADAVDFYNLELSNTNIVDHTTHDFKKDDGVT 239
Query: 198 FSIDE 184
F I++
Sbjct: 240 FVIED 244
>gb|AAL36312.1| unknown protein [Arabidopsis thaliana] gi|21281171|gb|AAM45120.1|
unknown protein [Arabidopsis thaliana]
Length = 199
Score = 248 bits (633), Expect = 9e-65
Identities = 120/199 (60%), Positives = 151/199 (75%), Gaps = 3/199 (1%)
Frame = -3
Query: 774 SLSISSSSSSSAMEEPKLLKLKPIEATPATFKDYGQVIQASPDGHGFGPHDAQLDLTRGI 595
SLS S S+ + P + L PIEATP TF +YGQVI+AS DG G+GP+DAQLDL++GI
Sbjct: 4 SLSFSCGVKSTMAKSPVEVNLIPIEATPETFAEYGQVIEASRDGAGYGPNDAQLDLSKGI 63
Query: 594 PRFYIMHLENRPLKFSNITHHASVTQCLGSIGGHAWYLGVAKPSIVDSSEIKDDTDRKV- 418
PR YI+ L+ PL F ITHHA VTQCLGSIGG WY+GVAKPS+++ DD R+V
Sbjct: 64 PRLYILRLKETPLGFFKITHHAKVTQCLGSIGGDIWYMGVAKPSLIED----DDDGRRVD 119
Query: 417 -VQSRSGHLYVPPAIEDIHVFKVTGSKFLKLNRGTWHAGPIFKADS-MDFYNLELSNTNE 244
V+++SGHLY+PP +E+I VF+ +G KF+KL+RGTWHAGP+F S MDFYNLELSNTN
Sbjct: 120 TVKAKSGHLYIPPEVEEIRVFRFSGPKFVKLHRGTWHAGPLFSGSSIMDFYNLELSNTNV 179
Query: 243 IDHTTHNFKKDNGVIFSID 187
+DHT+H+F K+NGV F D
Sbjct: 180 VDHTSHDFTKNNGVSFRFD 198
>ref|NP_565826.1| expressed protein; protein id: At2g35820.1, supported by cDNA:
22535. [Arabidopsis thaliana] gi|20197998|gb|AAD21475.2|
expressed protein [Arabidopsis thaliana]
Length = 192
Score = 248 bits (632), Expect = 1e-64
Identities = 115/183 (62%), Positives = 142/183 (76%)
Frame = -3
Query: 735 EEPKLLKLKPIEATPATFKDYGQVIQASPDGHGFGPHDAQLDLTRGIPRFYIMHLENRPL 556
+ P +KL PIEATP F DYGQVI+AS DG GFGP+DAQLDL+RGIPRFYIM + + P
Sbjct: 3 KSPVEVKLIPIEATPENFADYGQVIEASRDGAGFGPNDAQLDLSRGIPRFYIMRIRDTPF 62
Query: 555 KFSNITHHASVTQCLGSIGGHAWYLGVAKPSIVDSSEIKDDTDRKVVQSRSGHLYVPPAI 376
FS +THHASVTQCLGSIGGH WYLGVAKP++++ + D+ ++SRSGHLY PPA+
Sbjct: 63 DFSVLTHHASVTQCLGSIGGHVWYLGVAKPTLIEDGDDGKMVDK--LKSRSGHLYAPPAV 120
Query: 375 EDIHVFKVTGSKFLKLNRGTWHAGPIFKADSMDFYNLELSNTNEIDHTTHNFKKDNGVIF 196
E+I VF+V+G KF+KLN GTWH GP+F MDFYNLELSNTN +D TT++F K+ GV
Sbjct: 121 EEIRVFRVSGPKFIKLNHGTWHVGPLFSDSYMDFYNLELSNTNAVDRTTYDFIKNKGVTI 180
Query: 195 SID 187
+D
Sbjct: 181 RVD 183
>gb|AAM64294.1| unknown [Arabidopsis thaliana]
Length = 192
Score = 246 bits (627), Expect = 4e-64
Identities = 113/183 (61%), Positives = 142/183 (76%)
Frame = -3
Query: 735 EEPKLLKLKPIEATPATFKDYGQVIQASPDGHGFGPHDAQLDLTRGIPRFYIMHLENRPL 556
+ P +KL PIEATP F +YGQVI+AS DG GFGP+DAQLDL+RGIPRFYIM + + P
Sbjct: 3 KSPVEVKLIPIEATPENFAEYGQVIEASRDGAGFGPNDAQLDLSRGIPRFYIMRIRDTPF 62
Query: 555 KFSNITHHASVTQCLGSIGGHAWYLGVAKPSIVDSSEIKDDTDRKVVQSRSGHLYVPPAI 376
FS +THHASVTQCLGSIGGH WYLGVAKP++++ + D+ ++SRSGHLY PPA+
Sbjct: 63 DFSVLTHHASVTQCLGSIGGHVWYLGVAKPTLIEDGDDGKMVDK--LKSRSGHLYAPPAV 120
Query: 375 EDIHVFKVTGSKFLKLNRGTWHAGPIFKADSMDFYNLELSNTNEIDHTTHNFKKDNGVIF 196
E+I +F+V+G KF+KLN GTWH GP+F MDFYNLELSNTN +D TT++F K+ GV
Sbjct: 121 EEIRIFRVSGPKFIKLNHGTWHVGPLFSDSYMDFYNLELSNTNAVDRTTYDFIKNKGVTI 180
Query: 195 SID 187
+D
Sbjct: 181 RVD 183
>ref|NP_565827.1| expressed protein; protein id: At2g35830.1, supported by cDNA:
gi_16226204 [Arabidopsis thaliana]
gi|16226205|gb|AAL16102.1|AF428270_1 At2g35830/F11F19.26
[Arabidopsis thaliana] gi|20197996|gb|AAD21474.2|
expressed protein [Arabidopsis thaliana]
gi|21436045|gb|AAM51600.1| At2g35830/F11F19.26
[Arabidopsis thaliana]
Length = 189
Score = 244 bits (624), Expect = 9e-64
Identities = 117/186 (62%), Positives = 142/186 (75%), Gaps = 3/186 (1%)
Frame = -3
Query: 735 EEPKLLKLKPIEATPATFKDYGQVIQASPDGHGFGPHDAQLDLTRGIPRFYIMHLENRPL 556
+ P + L PIEATP F +YGQVI+AS DG GFGPHDAQLDL+RG PR YI+ L+ PL
Sbjct: 3 KSPVEVNLIPIEATPENFAEYGQVIEASRDGAGFGPHDAQLDLSRGTPRLYILRLKETPL 62
Query: 555 KFSNITHHASVTQCLGSIGGHAWYLGVAKPSIVDSSEIKDDTDRKV--VQSRSGHLYVPP 382
F ITHHA VTQCLGSIGG WY+GVAKPS+++ DD R V V+S+SGHLY+PP
Sbjct: 63 GFFKITHHAKVTQCLGSIGGDVWYMGVAKPSLIEDD---DDDGRSVDTVKSKSGHLYIPP 119
Query: 381 AIEDIHVFKVTGSKFLKLNRGTWHAGPIFKADS-MDFYNLELSNTNEIDHTTHNFKKDNG 205
+E+I VF+ +G KF+KL+RGTWHAGP+F S MDFYNLELSNTN +DHT+H+F K+NG
Sbjct: 120 EVEEIRVFRFSGPKFVKLHRGTWHAGPLFSGSSFMDFYNLELSNTNVVDHTSHDFTKNNG 179
Query: 204 VIFSID 187
V F D
Sbjct: 180 VSFGFD 185
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 748,030,657
Number of Sequences: 1393205
Number of extensions: 16167159
Number of successful extensions: 66225
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 49835
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 61834
length of database: 448,689,247
effective HSP length: 122
effective length of database: 278,718,237
effective search space used: 47382100290
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
